Conservation of cofitness between B158DRAFT_0396 and B158DRAFT_1125 in Kangiella aquimarina DSM 16071

83 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Kangiella aquimarina DSM 16071 1.0 B158DRAFT_0396 ribosomal RNA small subunit methyltransferase RsmB 1.0 B158DRAFT_1125 Holliday junction DNA helicase subunit RuvA 0.34 11
Shewanella amazonensis SB2B 0.40 Sama_0041 sun protein (RefSeq) 0.46 Sama_1840 ruvA Holliday junction DNA helicase RuvA (RefSeq) — —
Shewanella sp. ANA-3 0.40 Shewana3_0033 sun protein (RefSeq) 0.48 Shewana3_1956 ruvA Holliday junction DNA helicase RuvA (RefSeq) low > 73
Shewanella oneidensis MR-1 0.39 SO0030 sun sun protein (NCBI ptt file) 0.48 SO2430 ruvA Holliday junction DNA helicase RuvA (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.39 Shew_3738 sun protein (RefSeq) 0.50 Shew_2076 Holliday junction DNA helicase RuvA (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_00225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.53 CSW01_09245 Holliday junction branch migration protein RuvA low > 62
Erwinia tracheiphila SCR3 0.38 LU632_RS22480 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.50 LU632_RS13415 ruvA Holliday junction branch migration protein RuvA — —
Pseudomonas stutzeri RCH2 0.37 Psest_0021 ribosomal RNA small subunit methyltransferase RsmB 0.51 Psest_1496 Holliday junction DNA helicase, RuvA subunit low > 67
Dickeya dianthicola ME23 0.36 DZA65_RS20350 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.46 DZA65_RS10525 Holliday junction branch migration protein RuvA — —
Pantoea sp. MT58 0.36 IAI47_02280 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.51 IAI47_08445 Holliday junction branch migration protein RuvA low > 76
Dickeya dianthicola 67-19 0.36 HGI48_RS19225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.46 HGI48_RS10110 Holliday junction branch migration protein RuvA — —
Rahnella sp. WP5 0.36 EX31_RS15985 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.52 EX31_RS11675 Holliday junction branch migration protein RuvA low > 89
Pseudomonas syringae pv. syringae B728a ΔmexB 0.36 Psyr_0017 16S rRNA m(5)C-967 methyltransferase 0.51 Psyr_1409 Holliday junction DNA helicase subunit RuvA low > 86
Pseudomonas syringae pv. syringae B728a 0.36 Psyr_0017 16S rRNA m(5)C-967 methyltransferase 0.51 Psyr_1409 Holliday junction DNA helicase subunit RuvA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF2390 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 0.52 GFF1640 Holliday junction DNA helicase RuvA — —
Dickeya dadantii 3937 0.36 DDA3937_RS19135 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.47 DDA3937_RS10080 Holliday junction branch migration protein RuvA — —
Pseudomonas simiae WCS417 0.35 PS417_00085 16S rRNA methyltransferase 0.51 PS417_22450 ATP-dependent DNA helicase RuvA low > 88
Pectobacterium carotovorum WPP14 0.35 HER17_RS02215 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.46 HER17_RS11845 Holliday junction branch migration protein RuvA — —
Pseudomonas putida KT2440 0.35 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.51 PP_1216 Holliday junction ATP-dependent DNA helicase RuvA low > 96
Pseudomonas fluorescens SBW25 0.35 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.52 PFLU_RS24090 Holliday junction branch migration protein RuvA low > 109
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.52 PFLU_RS24090 Holliday junction branch migration protein RuvA low > 109
Escherichia coli ECOR27 0.35 NOLOHH_09320 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.53 NOLOHH_16725 ruvA Holliday junction branch migration protein RuvA — —
Escherichia coli BL21 0.35 ECD_03139 16S rRNA m(5)C967 methyltransferase, SAM-dependent 0.53 ECD_01832 component of RuvABC resolvasome, regulatory subunit — —
Escherichia coli ECRC62 0.35 BNILDI_02200 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.53 BNILDI_15515 ruvA Holliday junction branch migration protein RuvA — —
Escherichia coli BW25113 0.35 b3289 rsmB 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) 0.53 b1861 ruvA Holliday junction DNA helicase motor protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_00415 Ribosomal RNA small subunit methyltransferase B 0.53 OHPLBJKB_01867 Holliday junction ATP-dependent DNA helicase RuvA — —
Serratia liquefaciens MT49 0.35 IAI46_23275 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.47 IAI46_14625 Holliday junction branch migration protein RuvA — —
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_4121 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.49 Pf6N2E2_5536 Holliday junction DNA helicase RuvA low > 103
Escherichia coli Nissle 1917 0.35 ECOLIN_RS18875 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.53 ECOLIN_RS10365 Holliday junction branch migration protein RuvA — —
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_11275 16S rRNA methyltransferase 0.49 AO356_18020 ATP-dependent DNA helicase RuvA low > 104
Escherichia coli ECOR38 0.35 HEPCGN_16350 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.53 HEPCGN_04690 ruvA Holliday junction branch migration protein RuvA — —
Escherichia fergusonii Becca 0.35 EFB2_00535 Ribosomal RNA small subunit methyltransferase B 0.53 EFB2_02081 Holliday junction ATP-dependent DNA helicase RuvA — —
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_10630 16S rRNA methyltransferase 0.49 AO353_03585 ATP-dependent DNA helicase RuvA low > 101
Escherichia coli ECRC102 0.35 NIAGMN_15290 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.53 NIAGMN_01780 ruvA Holliday junction branch migration protein RuvA — —
Escherichia coli ECRC99 0.35 KEDOAH_10620 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.53 KEDOAH_01825 ruvA Holliday junction branch migration protein RuvA — —
Pseudomonas sp. RS175 0.35 PFR28_04663 Ribosomal RNA small subunit methyltransferase B 0.49 PFR28_03413 Holliday junction ATP-dependent DNA helicase RuvA low > 88
Escherichia coli ECRC98 0.35 JDDGAC_21150 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.53 JDDGAC_00855 ruvA Holliday junction branch migration protein RuvA — —
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_1914 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.48 Pf1N1B4_638 Holliday junction DNA helicase RuvA — —
Escherichia coli ECRC101 0.35 MCAODC_08050 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.53 MCAODC_19125 ruvA Holliday junction branch migration protein RuvA — —
Escherichia coli ECRC100 0.35 OKFHMN_17520 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.53 OKFHMN_26280 ruvA Holliday junction branch migration protein RuvA — —
Marinobacter adhaerens HP15 0.35 HP15_3742 Fmu, rRNA SAM-dependent methyltransferase 0.50 HP15_2041 Holliday junction ATP-dependent DNA helicase RuvA — —
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_652 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.50 PfGW456L13_1852 Holliday junction DNA helicase RuvA low > 87
Klebsiella michiganensis M5al 0.35 BWI76_RS25680 16S rRNA m5C967 methyltransferase 0.51 BWI76_RS18150 Holliday junction branch migration protein RuvA — —
Enterobacter sp. TBS_079 0.34 MPMX20_04196 Ribosomal RNA small subunit methyltransferase B 0.51 MPMX20_02767 Holliday junction ATP-dependent DNA helicase RuvA low > 85
Alteromonas macleodii MIT1002 0.34 MIT1002_00018 Ribosomal RNA small subunit methyltransferase B 0.49 MIT1002_01332 Holliday junction ATP-dependent DNA helicase RuvA — —
Enterobacter asburiae PDN3 0.34 EX28DRAFT_0039 16S rRNA (cytosine(967)-C(5))-methyltransferase 0.51 EX28DRAFT_0695 Holliday junction DNA helicase subunit RuvA — —
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_13790 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.39 OKGIIK_01840 ruvA Holliday junction branch migration protein RuvA — —
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS13890 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.43 ABZR86_RS10840 Holliday junction branch migration protein RuvA low > 74
Pseudomonas sp. S08-1 0.34 OH686_12525 16S rRNA (cytosine(967)-C(5))-methyltransferase 0.51 OH686_19130 Holliday junction DNA helicase RuvA — —
Dechlorosoma suillum PS 0.32 Dsui_0812 ribosomal RNA small subunit methyltransferase RsmB 0.36 Dsui_0485 Holliday junction DNA helicase, RuvA subunit — —
Acinetobacter radioresistens SK82 0.31 MPMX26_03021 Ribosomal RNA small subunit methyltransferase B 0.39 MPMX26_02185 Holliday junction ATP-dependent DNA helicase RuvA low > 36
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.4741.1 hypothetical protein 0.37 Xcc-8004.1436.1 Holliday junction DNA helicase RuvA low > 74
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS10125 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.43 LRK54_RS04910 Holliday junction branch migration protein RuvA — —
Rhodanobacter denitrificans MT42 0.30 LRK55_RS09765 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.43 LRK55_RS04690 Holliday junction branch migration protein RuvA — —
Lysobacter sp. OAE881 0.30 ABIE51_RS02255 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.39 ABIE51_RS05045 Holliday junction branch migration protein RuvA low > 62
Castellaniella sp019104865 MT123 0.29 ABCV34_RS14225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.36 ABCV34_RS07980 Holliday junction branch migration protein RuvA low > 48
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS04950 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.36 ABZR87_RS07625 Holliday junction branch migration protein RuvA low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.29 GFF1789 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.35 GFF1666 Holliday junction DNA helicase RuvA low > 90
Ralstonia solanacearum PSI07 0.28 RPSI07_RS23575 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.36 RPSI07_RS21550 Holliday junction branch migration protein RuvA — —
Ralstonia solanacearum IBSBF1503 0.27 RALBFv3_RS09790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.36 RALBFv3_RS11670 Holliday junction branch migration protein RuvA — —
Ralstonia solanacearum UW163 0.27 UW163_RS03790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.36 UW163_RS01915 Holliday junction branch migration protein RuvA — —
Acidovorax sp. GW101-3H11 0.26 Ac3H11_4461 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.33 Ac3H11_4683 Holliday junction DNA helicase RuvA — —
Paraburkholderia bryophila 376MFSha3.1 0.26 H281DRAFT_02237 16S rRNA (cytosine967-C5)-methyltransferase 0.35 H281DRAFT_04254 Holliday junction DNA helicase subunit RuvA — —
Variovorax sp. SCN45 0.26 GFF5878 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) 0.37 GFF2073 Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12) low > 127
Ralstonia solanacearum GMI1000 0.26 RS_RS00375 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.36 RS_RS02490 Holliday junction branch migration protein RuvA — —
Variovorax sp. OAS795 0.25 ABID97_RS05360 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.37 ABID97_RS24920 Holliday junction branch migration protein RuvA low > 91
Cupriavidus basilensis FW507-4G11 0.24 RR42_RS20450 16S rRNA methyltransferase 0.33 RR42_RS02705 Holliday junction DNA helicase RuvA low > 128
Synechococcus elongatus PCC 7942 0.24 Synpcc7942_0962 sun sun protein 0.27 Synpcc7942_2298 ruvA Holliday junction DNA helicase motor protein — —
Azospirillum brasilense Sp245 0.22 AZOBR_RS00235 MFS transporter 0.18 AZOBR_RS09045 Holliday junction DNA helicase RuvA — —
Azospirillum sp. SherDot2 0.22 MPMX19_02327 Ribosomal RNA small subunit methyltransferase B 0.20 MPMX19_00697 Holliday junction ATP-dependent DNA helicase RuvA — —
Bosea sp. OAE506 0.20 ABIE41_RS05105 RsmB/NOP family class I SAM-dependent RNA methyltransferase 0.22 ABIE41_RS09475 Holliday junction branch migration protein RuvA — —
Rhizobium sp. OAE497 0.19 ABIE40_RS19140 RsmB/NOP family class I SAM-dependent RNA methyltransferase 0.19 ABIE40_RS15745 Holliday junction branch migration protein RuvA low > 107
Rhodopseudomonas palustris CGA009 0.19 TX73_000155 transcription antitermination factor NusB 0.23 TX73_005655 Holliday junction branch migration protein RuvA — —
Sinorhizobium meliloti 1021 0.19 SMc04090 sun protein 0.19 SMc03966 Holliday junction DNA helicase RuvA — —
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_00101 16S rRNA m5C methyltransferase RsmB 0.17 CCNA_03345 Holliday junction DNA helicase RuvA — —
Caulobacter crescentus NA1000 0.19 CCNA_00101 16S rRNA m5C methyltransferase RsmB 0.17 CCNA_03345 Holliday junction DNA helicase RuvA low > 66
Agrobacterium fabrum C58 0.18 Atu2825 Sun protein 0.19 Atu3723 Holliday junction DNA helicase RuvA — —
Dinoroseobacter shibae DFL-12 0.18 Dshi_3033 Fmu (Sun) domain protein (RefSeq) 0.19 Dshi_1104 Holliday junction DNA helicase RuvA (RefSeq) — —
Fusobacterium nucleatum SB010 0.18 HUW76_07955 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.18 HUW76_06655 Holliday junction branch migration protein RuvA low > 35
Sphingomonas koreensis DSMZ 15582 0.17 Ga0059261_2239 tRNA and rRNA cytosine-C5-methylases 0.20 Ga0059261_0820 Holliday junction DNA helicase subunit RuvA — —
Brevundimonas sp. GW460-12-10-14-LB2 0.16 A4249_RS13165 RsmB/NOP family class I SAM-dependent RNA methyltransferase 0.21 A4249_RS15860 Holliday junction branch migration protein RuvA — —
Desulfovibrio vulgaris Hildenborough JW710 0.14 DVU3363 sun sun protein (TIGR) 0.21 DVU2256 ruvA Holliday junction DNA helicase RuvA (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.14 DvMF_2042 NusB/RsmB/TIM44 (RefSeq) 0.21 DvMF_3204 Holliday junction DNA helicase RuvA (RefSeq) low > 51
Mycobacterium tuberculosis H37Rv 0.12 Rv1407 Probable Fmu protein (sun protein) 0.24 Rv2593c Probable holliday junction DNA helicase RuvA — —

Not shown: 0 genomes with orthologs for B158DRAFT_0396 only; 18 genomes with orthologs for B158DRAFT_1125 only