Conservation of cofitness between B158DRAFT_0588 and B158DRAFT_0582 in Kangiella aquimarina DSM 16071

83 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Kangiella aquimarina DSM 16071 1.0 B158DRAFT_0588 ribonuclease PH 1.0 B158DRAFT_0582 TIGR00255 family protein 0.73 4
Alteromonas macleodii MIT1002 0.77 MIT1002_04071 Ribonuclease PH 0.57 MIT1002_04072 hypothetical protein low > 70
Shewanella loihica PV-4 0.76 Shew_3488 ribonuclease PH (RefSeq) 0.53 Shew_3489 hypothetical protein (RefSeq) low > 60
Pseudomonas sp. S08-1 0.74 OH686_13570 ribonuclease PH 0.50 OH686_13565 UPF0701 protein YicC low > 80
Shewanella sp. ANA-3 0.74 Shewana3_3777 RNAse PH (RefSeq) 0.54 Shewana3_3778 hypothetical protein (RefSeq) 0.59 3
Shewanella oneidensis MR-1 0.74 SO4256 rph ribonuclease PH (NCBI ptt file) 0.54 SO4257 conserved hypothetical protein TIGR00255 (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.74 Sama_0320 tRNA nucleotidyltransferase (RefSeq) 0.54 Sama_0319 hypothetical protein (RefSeq) low > 62
Dickeya dadantii 3937 0.71 DDA3937_RS20540 ribonuclease PH 0.56 DDA3937_RS20645 YicC family protein 0.63 42
Dickeya dianthicola 67-19 0.71 HGI48_RS00675 ribonuclease PH 0.55 HGI48_RS00540 YicC family protein 0.56 51
Dickeya dianthicola ME23 0.71 DZA65_RS00730 ribonuclease PH 0.55 DZA65_RS00575 YicC family protein low > 75
Pseudomonas sp. RS175 0.71 PFR28_04420 Ribonuclease PH 0.50 PFR28_04421 hypothetical protein — —
Pseudomonas stutzeri RCH2 0.71 Psest_3813 ribonuclease PH 0.51 Psest_3814 TIGR00255 family protein — —
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_09260 ribonuclease PH 0.51 AO353_09265 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N2E2 0.70 Pf6N2E2_4365 Ribonuclease PH (EC 2.7.7.56) 0.51 Pf6N2E2_4364 Protein YicC low > 103
Pseudomonas fluorescens FW300-N2C3 0.70 AO356_12500 ribonuclease PH 0.50 AO356_12495 hypothetical protein 0.32 19
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_0213 RNAse PH 0.49 Psyr_0212 Conserved hypothetical protein 255 low > 86
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_0213 RNAse PH 0.49 Psyr_0212 Conserved hypothetical protein 255 low > 86
Pseudomonas fluorescens GW456-L13 0.70 PfGW456L13_784 Ribonuclease PH (EC 2.7.7.56) 0.50 PfGW456L13_783 Protein YicC low > 87
Pseudomonas fluorescens FW300-N1B4 0.70 Pf1N1B4_2117 Ribonuclease PH (EC 2.7.7.56) 0.50 Pf1N1B4_2116 Protein YicC — —
Pseudomonas putida KT2440 0.70 PP_5294 Ribonuclease PH 0.50 PP_5295 conserved protein of unknown function low > 96
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS29490 ribonuclease PH 0.49 PFLU_RS29495 YicC family protein low > 109
Pseudomonas fluorescens SBW25 0.69 PFLU_RS29490 ribonuclease PH 0.49 PFLU_RS29495 YicC family protein low > 109
Pseudomonas simiae WCS417 0.69 PS417_27810 ribonuclease PH 0.49 PS417_27815 hypothetical protein low > 88
Marinobacter adhaerens HP15 0.68 HP15_300 ribonuclease PH 0.48 HP15_301 conserved hypothetical protein low > 73
Pantoea sp. MT58 0.68 IAI47_00595 ribonuclease PH 0.53 IAI47_00580 YicC family protein low > 76
Xanthomonas campestris pv. campestris strain 8004 0.68 Xcc-8004.1221.1 Ribonuclease PH (EC 2.7.7.56) 0.39 Xcc-8004.1220.1 Protein YicC low > 74
Serratia liquefaciens MT49 0.68 IAI46_24850 ribonuclease PH 0.54 IAI46_24855 YicC family protein low > 86
Rahnella sp. WP5 0.68 EX31_RS14505 ribonuclease PH 0.53 EX31_RS14510 YicC family protein low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF366 Ribonuclease PH (EC 2.7.7.56) 0.53 GFF365 Protein YicC 0.64 6
Escherichia coli ECRC102 0.67 NIAGMN_13350 rph ribonuclease PH 0.53 NIAGMN_13345 yicC UPF0701 protein YicC — —
Escherichia coli ECRC99 0.67 KEDOAH_12555 rph ribonuclease PH 0.53 KEDOAH_12560 yicC UPF0701 protein YicC — —
Escherichia coli ECRC62 0.67 BNILDI_04045 rph ribonuclease PH 0.53 BNILDI_04050 yicC UPF0701 protein YicC 0.71 12
Escherichia coli ECOR27 0.67 NOLOHH_07470 rph ribonuclease PH 0.53 NOLOHH_07465 yicC UPF0701 protein YicC low > 75
Escherichia coli ECRC101 0.67 MCAODC_06100 rph ribonuclease PH 0.53 MCAODC_06095 yicC UPF0701 protein YicC low > 87
Escherichia coli Nissle 1917 0.67 ECOLIN_RS20755 ribonuclease PH 0.53 ECOLIN_RS20760 YicC/YloC family endoribonuclease low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_00059 Ribonuclease PH 0.53 OHPLBJKB_00058 hypothetical protein 0.62 26
Escherichia coli BL21 0.67 ECD_03500 ribonuclease PH 0.53 ECD_03501 UPF0701 family protein low > 61
Escherichia coli ECOR38 0.67 HEPCGN_14410 rph ribonuclease PH 0.53 HEPCGN_14405 yicC UPF0701 protein YicC low > 87
Escherichia coli ECRC98 0.67 JDDGAC_19215 rph ribonuclease PH 0.53 JDDGAC_19210 yicC UPF0701 protein YicC low > 86
Escherichia coli ECRC100 0.67 OKFHMN_15590 rph ribonuclease PH 0.53 OKFHMN_15585 yicC UPF0701 protein YicC low > 80
Escherichia fergusonii Becca 0.67 EFB2_00170 Ribonuclease PH 0.53 EFB2_00169 hypothetical protein low > 86
Klebsiella michiganensis M5al 0.67 BWI76_RS27390 ribonuclease PH 0.54 BWI76_RS27395 hypothetical protein low > 92
Pectobacterium carotovorum WPP14 0.67 HER17_RS20855 ribonuclease PH 0.54 HER17_RS20905 YicC family protein low > 75
Enterobacter sp. TBS_079 0.67 MPMX20_00092 Ribonuclease PH 0.55 MPMX20_00091 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.66 EX28DRAFT_3893 ribonuclease PH 0.53 EX28DRAFT_3894 TIGR00255 family protein low > 76
Erwinia tracheiphila SCR3 0.66 LU632_RS22020 rph ribonuclease PH 0.54 LU632_RS22050 YicC family protein low > 74
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_01115 ribonuclease PH 0.55 CSW01_01110 YicC family protein low > 62
Escherichia coli BW25113 0.66 b3643 rph ribonuclease PH (NCBI) 0.53 b3644 yicC hypothetical protein (NCBI) low > 76
Herbaspirillum seropedicae SmR1 0.66 HSERO_RS10655 ribonuclease PH 0.34 HSERO_RS10650 hypothetical protein low > 78
Ralstonia solanacearum PSI07 0.65 RPSI07_RS13840 ribonuclease PH 0.35 RPSI07_RS13855 YicC family protein — —
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS03645 ribonuclease PH 0.34 QEN71_RS03650 YicC/YloC family endoribonuclease low > 153
Ralstonia solanacearum GMI1000 0.65 RS_RS10830 ribonuclease PH 0.35 RS_RS10815 YicC family protein — —
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS15255 ribonuclease PH 0.35 ABZR87_RS15240 YicC/YloC family endoribonuclease low > 80
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS15325 ribonuclease PH 0.34 BPHYT_RS15320 hypothetical protein low > 109
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS11900 ribonuclease PH 0.41 ABZR86_RS11895 YicC/YloC family endoribonuclease low > 74
Ralstonia solanacearum UW163 0.64 UW163_RS10375 ribonuclease PH 0.34 UW163_RS10390 YicC family protein — —
Dechlorosoma suillum PS 0.64 Dsui_0494 ribonuclease PH 0.37 Dsui_0497 TIGR00255 family protein low > 51
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS03345 ribonuclease PH 0.34 RALBFv3_RS03330 YicC family protein low > 76
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_04008 RNAse PH 0.34 H281DRAFT_04007 TIGR00255 family protein low > 103
Paraburkholderia graminis OAS925 0.63 ABIE53_003234 ribonuclease PH 0.34 ABIE53_003233 uncharacterized protein (TIGR00255 family) 0.24 61
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS04890 ribonuclease PH 0.35 RR42_RS04905 hypothetical protein — —
Lysobacter sp. OAE881 0.63 ABIE51_RS17285 ribonuclease PH 0.42 ABIE51_RS17280 YicC/YloC family endoribonuclease low > 62
Azospirillum brasilense Sp245 0.63 AZOBR_RS02205 ribonuclease PH 0.27 AZOBR_RS16330 hypothetical protein — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF3254 Ribonuclease PH (EC 2.7.7.56) 0.27 GFF3251 Protein YicC — —
Variovorax sp. OAS795 0.61 ABID97_RS23640 ribonuclease PH 0.31 ABID97_RS23655 YicC/YloC family endoribonuclease low > 91
Variovorax sp. SCN45 0.61 GFF2381 Ribonuclease PH (EC 2.7.7.56) 0.31 GFF2378 UPF0701 protein YicC — —
Rhizobium sp. OAE497 0.61 ABIE40_RS01640 ribonuclease PH 0.27 ABIE40_RS06380 YicC/YloC family endoribonuclease low > 107
Sinorhizobium meliloti 1021 0.60 SMc01144 ribonuclease PH 0.27 SMc00576 hypothetical protein low > 103
Agrobacterium fabrum C58 0.60 Atu0327 ribonuclease PH 0.26 Atu1100 hypothetical protein — —
Rhodanobacter denitrificans MT42 0.60 LRK55_RS11470 ribonuclease PH 0.39 LRK55_RS11475 YicC family protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.60 LRK54_RS11745 ribonuclease PH 0.39 LRK54_RS11750 YicC family protein low > 59
Rhodanobacter sp. FW510-T8 0.60 OKGIIK_12150 rph ribonuclease PH 0.38 OKGIIK_12145 yicC YicC-like family, N-terminal region — —
Bosea sp. OAE506 0.59 ABIE41_RS03295 ribonuclease PH 0.26 ABIE41_RS17740 YicC/YloC family endoribonuclease low > 77
Azospirillum sp. SherDot2 0.59 MPMX19_02576 Ribonuclease PH 0.28 MPMX19_00983 hypothetical protein — —
Castellaniella sp019104865 MT123 0.59 ABCV34_RS03515 ribonuclease PH 0.27 ABCV34_RS03510 DUF1732 domain-containing protein low > 48
Acidovorax sp. GW101-3H11 0.58 Ac3H11_3670 Ribonuclease PH (EC 2.7.7.56) 0.28 Ac3H11_3667 Protein YicC — —
Rhodopseudomonas palustris CGA009 0.58 TX73_001710 ribonuclease PH 0.28 TX73_015880 YicC family protein 0.59 2
Magnetospirillum magneticum AMB-1 0.57 AMB_RS22760 ribonuclease PH 0.27 AMB_RS03835 YicC family protein low > 64
Dinoroseobacter shibae DFL-12 0.57 Dshi_3463 ribonuclease PH (RefSeq) 0.27 Dshi_1528 domain of unknown function DUF1732 (RefSeq) low > 64
Rhodospirillum rubrum S1H 0.56 Rru_A3641 Ribonuclease PH (NCBI) 0.22 Rru_A0428 hypothetical protein (NCBI) — —
Phaeobacter inhibens DSM 17395 0.56 PGA1_c35030 ribonuclease PH 0.31 PGA1_c15840 TIGR00255 family protein low > 62
Brevundimonas sp. GW460-12-10-14-LB2 0.55 A4249_RS13125 ribonuclease PH 0.24 A4249_RS06780 YicC family protein low > 48
Caulobacter crescentus NA1000 0.54 CCNA_00151 ribonuclease PH 0.23 CCNA_01752 YicC-family protein low > 66
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_00151 ribonuclease PH 0.23 CCNA_01752 YicC-family protein low > 67

Not shown: 5 genomes with orthologs for B158DRAFT_0588 only; 13 genomes with orthologs for B158DRAFT_0582 only