Conservation of cofitness between B158DRAFT_0396 and B158DRAFT_0197 in Kangiella aquimarina DSM 16071

82 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Kangiella aquimarina DSM 16071 1.0 B158DRAFT_0396 ribosomal RNA small subunit methyltransferase RsmB 1.0 B158DRAFT_0197 pyrroline-5-carboxylate reductase 0.33 17
Shewanella sp. ANA-3 0.40 Shewana3_0033 sun protein (RefSeq) 0.40 Shewana3_1193 pyrroline-5-carboxylate reductase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.40 Sama_0041 sun protein (RefSeq) 0.37 Sama_2478 pyrroline-5-carboxylate reductase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.39 SO0030 sun sun protein (NCBI ptt file) 0.41 SO3354 proC pyrroline-5-carboxylate reductase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.39 Shew_3738 sun protein (RefSeq) 0.36 Shew_1136 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) low > 60
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_00225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.41 CSW01_02450 pyrroline-5-carboxylate reductase low > 62
Erwinia tracheiphila SCR3 0.38 LU632_RS22480 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.23 LU632_RS18995 proC pyrroline-5-carboxylate reductase low > 74
Pseudomonas stutzeri RCH2 0.37 Psest_0021 ribosomal RNA small subunit methyltransferase RsmB 0.37 Psest_0283 pyrroline-5-carboxylate reductase — —
Dickeya dianthicola ME23 0.36 DZA65_RS20350 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.38 DZA65_RS18440 pyrroline-5-carboxylate reductase — —
Pantoea sp. MT58 0.36 IAI47_02280 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.24 IAI47_14945 pyrroline-5-carboxylate reductase low > 76
Pseudomonas syringae pv. syringae B728a ΔmexB 0.36 Psyr_0017 16S rRNA m(5)C-967 methyltransferase 0.37 Psyr_0476 pyrroline-5-carboxylate reductase 0.37 44
Dickeya dianthicola 67-19 0.36 HGI48_RS19225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.37 HGI48_RS17350 pyrroline-5-carboxylate reductase — —
Rahnella sp. WP5 0.36 EX31_RS15985 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.38 EX31_RS02690 pyrroline-5-carboxylate reductase low > 89
Pseudomonas syringae pv. syringae B728a 0.36 Psyr_0017 16S rRNA m(5)C-967 methyltransferase 0.37 Psyr_0476 pyrroline-5-carboxylate reductase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF2390 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 0.27 GFF4283 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) low > 78
Dickeya dadantii 3937 0.36 DDA3937_RS19135 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.38 DDA3937_RS17305 pyrroline-5-carboxylate reductase low > 74
Pseudomonas putida KT2440 0.35 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.36 PP_5095 pyrroline-5-carboxylate reductase low > 96
Pectobacterium carotovorum WPP14 0.35 HER17_RS02215 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.37 HER17_RS03805 pyrroline-5-carboxylate reductase — —
Pseudomonas simiae WCS417 0.35 PS417_00085 16S rRNA methyltransferase 0.38 PS417_26730 pyrroline-5-carboxylate reductase low > 88
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.38 PFLU_RS28375 pyrroline-5-carboxylate reductase — —
Pseudomonas fluorescens SBW25 0.35 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.38 PFLU_RS28375 pyrroline-5-carboxylate reductase — —
Escherichia coli BW25113 0.35 b3289 rsmB 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) 0.27 b0386 proC pyrroline-5-carboxylate reductase (NCBI) low > 76
Escherichia coli BL21 0.35 ECD_03139 16S rRNA m(5)C967 methyltransferase, SAM-dependent 0.27 ECD_00333 pyrroline-5-carboxylate reductase, NAD(P)-binding low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_00415 Ribosomal RNA small subunit methyltransferase B 0.27 OHPLBJKB_03288 Pyrroline-5-carboxylate reductase low > 73
Escherichia coli ECRC62 0.35 BNILDI_02200 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.27 BNILDI_22950 proC pyrroline-5-carboxylate reductase low > 75
Escherichia coli ECOR27 0.35 NOLOHH_09320 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.27 NOLOHH_01535 proC pyrroline-5-carboxylate reductase low > 75
Serratia liquefaciens MT49 0.35 IAI46_23275 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.37 IAI46_21415 pyrroline-5-carboxylate reductase low > 86
Escherichia fergusonii Becca 0.35 EFB2_00535 Ribosomal RNA small subunit methyltransferase B 0.27 EFB2_03670 Pyrroline-5-carboxylate reductase low > 86
Escherichia coli ECOR38 0.35 HEPCGN_16350 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.27 HEPCGN_07250 proC pyrroline-5-carboxylate reductase low > 87
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_11275 16S rRNA methyltransferase 0.38 AO356_13420 pyrroline-5-carboxylate reductase — —
Escherichia coli Nissle 1917 0.35 ECOLIN_RS18875 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.27 ECOLIN_RS02345 pyrroline-5-carboxylate reductase low > 55
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_10630 16S rRNA methyltransferase 0.36 AO353_08165 pyrroline-5-carboxylate reductase low > 101
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_4121 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.38 Pf6N2E2_4600 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) — —
Escherichia coli ECRC99 0.35 KEDOAH_10620 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.27 KEDOAH_19355 proC pyrroline-5-carboxylate reductase — —
Escherichia coli ECRC98 0.35 JDDGAC_21150 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.27 JDDGAC_12265 proC pyrroline-5-carboxylate reductase low > 86
Escherichia coli ECRC100 0.35 OKFHMN_17520 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.27 OKFHMN_08610 proC pyrroline-5-carboxylate reductase low > 80
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_1914 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.38 Pf1N1B4_2341 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) — —
Escherichia coli ECRC101 0.35 MCAODC_08050 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.27 MCAODC_27835 proC pyrroline-5-carboxylate reductase low > 87
Escherichia coli ECRC102 0.35 NIAGMN_15290 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.27 NIAGMN_06665 proC pyrroline-5-carboxylate reductase — —
Pseudomonas sp. RS175 0.35 PFR28_04663 Ribosomal RNA small subunit methyltransferase B 0.38 PFR28_04243 Pyrroline-5-carboxylate reductase — —
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_652 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.38 PfGW456L13_1010 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) low > 87
Marinobacter adhaerens HP15 0.35 HP15_3742 Fmu, rRNA SAM-dependent methyltransferase 0.39 HP15_287 pyrroline-5-carboxylate reductase low > 73
Klebsiella michiganensis M5al 0.35 BWI76_RS25680 16S rRNA m5C967 methyltransferase 0.27 BWI76_RS06170 pyrroline-5-carboxylate reductase — —
Enterobacter sp. TBS_079 0.34 MPMX20_04196 Ribosomal RNA small subunit methyltransferase B 0.27 MPMX20_00976 Pyrroline-5-carboxylate reductase low > 85
Enterobacter asburiae PDN3 0.34 EX28DRAFT_0039 16S rRNA (cytosine(967)-C(5))-methyltransferase 0.27 EX28DRAFT_2585 pyrroline-5-carboxylate reductase low > 76
Alteromonas macleodii MIT1002 0.34 MIT1002_00018 Ribosomal RNA small subunit methyltransferase B 0.36 MIT1002_03062 Pyrroline-5-carboxylate reductase low > 70
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS13890 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.35 ABZR86_RS10425 pyrroline-5-carboxylate reductase low > 74
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_13790 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.34 OKGIIK_11135 proC pyrroline-5-carboxylate reductase low > 52
Pseudomonas sp. S08-1 0.34 OH686_12525 16S rRNA (cytosine(967)-C(5))-methyltransferase 0.36 OH686_10980 pyrroline-5-carboxylate reductase 0.56 73
Dechlorosoma suillum PS 0.32 Dsui_0812 ribosomal RNA small subunit methyltransferase RsmB 0.32 Dsui_0602 pyrroline-5-carboxylate reductase — —
Acinetobacter radioresistens SK82 0.31 MPMX26_03021 Ribosomal RNA small subunit methyltransferase B 0.34 MPMX26_00572 Pyrroline-5-carboxylate reductase low > 36
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.4741.1 hypothetical protein 0.33 Xcc-8004.1710.1 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) low > 74
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS10125 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.33 LRK54_RS04260 pyrroline-5-carboxylate reductase low > 59
Rhodanobacter denitrificans MT42 0.30 LRK55_RS09765 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.33 LRK55_RS04030 pyrroline-5-carboxylate reductase — —
Lysobacter sp. OAE881 0.30 ABIE51_RS02255 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.38 ABIE51_RS16065 pyrroline-5-carboxylate reductase low > 62
Castellaniella sp019104865 MT123 0.29 ABCV34_RS14225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.27 ABCV34_RS03610 pyrroline-5-carboxylate reductase low > 48
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS04950 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.33 ABZR87_RS01230 pyrroline-5-carboxylate reductase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.29 GFF1789 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.27 GFF2806 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) 0.43 59
Ralstonia solanacearum PSI07 0.28 RPSI07_RS23575 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.31 RPSI07_RS11720 pyrroline-5-carboxylate reductase low > 81
Ralstonia solanacearum UW163 0.27 UW163_RS03790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.32 UW163_RS08045 pyrroline-5-carboxylate reductase — —
Ralstonia solanacearum IBSBF1503 0.27 RALBFv3_RS09790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.32 RALBFv3_RS05580 pyrroline-5-carboxylate reductase low > 76
Paraburkholderia bryophila 376MFSha3.1 0.26 H281DRAFT_02237 16S rRNA (cytosine967-C5)-methyltransferase 0.29 H281DRAFT_04679 pyrroline-5-carboxylate reductase low > 103
Variovorax sp. SCN45 0.26 GFF5878 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) 0.27 GFF5553 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) — —
Acidovorax sp. GW101-3H11 0.26 Ac3H11_4461 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.29 Ac3H11_788 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) — —
Ralstonia solanacearum GMI1000 0.26 RS_RS00375 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.33 RS_RS13440 pyrroline-5-carboxylate reductase — —
Variovorax sp. OAS795 0.25 ABID97_RS05360 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.28 ABID97_RS01555 pyrroline-5-carboxylate reductase — —
Cupriavidus basilensis FW507-4G11 0.24 RR42_RS20450 16S rRNA methyltransferase 0.30 RR42_RS17360 pyrroline-5-carboxylate reductase — —
Synechococcus elongatus PCC 7942 0.24 Synpcc7942_0962 sun sun protein 0.25 Synpcc7942_2058 proC pyrroline-5-carboxylate reductase — —
Azospirillum brasilense Sp245 0.22 AZOBR_RS00235 MFS transporter 0.25 AZOBR_RS06245 pyrroline-5-carboxylate reductase — —
Azospirillum sp. SherDot2 0.22 MPMX19_02327 Ribosomal RNA small subunit methyltransferase B 0.24 MPMX19_01399 Pyrroline-5-carboxylate reductase — —
Bosea sp. OAE506 0.20 ABIE41_RS05105 RsmB/NOP family class I SAM-dependent RNA methyltransferase 0.19 ABIE41_RS11365 pyrroline-5-carboxylate reductase — —
Rhizobium sp. OAE497 0.19 ABIE40_RS19140 RsmB/NOP family class I SAM-dependent RNA methyltransferase 0.26 ABIE40_RS13005 pyrroline-5-carboxylate reductase low > 107
Rhodopseudomonas palustris CGA009 0.19 TX73_000155 transcription antitermination factor NusB 0.27 TX73_022630 pyrroline-5-carboxylate reductase — —
Sinorhizobium meliloti 1021 0.19 SMc04090 sun protein 0.26 SMc02677 pyrroline-5-carboxylate reductase low > 103
Caulobacter crescentus NA1000 0.19 CCNA_00101 16S rRNA m5C methyltransferase RsmB 0.19 CCNA_00528 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) low > 66
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_00101 16S rRNA m5C methyltransferase RsmB 0.19 CCNA_00528 pyrroline-5-carboxylate reductase low > 67
Agrobacterium fabrum C58 0.18 Atu2825 Sun protein 0.28 Atu2209 pyrroline-5-carboxylate reductase low > 89
Dinoroseobacter shibae DFL-12 0.18 Dshi_3033 Fmu (Sun) domain protein (RefSeq) 0.26 Dshi_2645 pyrroline-5-carboxylate reductase (RefSeq) — —
Sphingomonas koreensis DSMZ 15582 0.17 Ga0059261_2239 tRNA and rRNA cytosine-C5-methylases 0.24 Ga0059261_3321 pyrroline-5-carboxylate reductase low > 68
Brevundimonas sp. GW460-12-10-14-LB2 0.16 A4249_RS13165 RsmB/NOP family class I SAM-dependent RNA methyltransferase 0.15 A4249_RS09840 pyrroline-5-carboxylate reductase dimerization domain-containing protein low > 48
Desulfovibrio vulgaris Hildenborough JW710 0.14 DVU3363 sun sun protein (TIGR) 0.22 DVU2332 proC pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) low > 55
Desulfovibrio vulgaris Miyazaki F 0.14 DvMF_2042 NusB/RsmB/TIM44 (RefSeq) 0.18 DvMF_3161 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) low > 51
Mycobacterium tuberculosis H37Rv 0.12 Rv1407 Probable Fmu protein (sun protein) 0.24 Rv0500 Probable pyrroline-5-carboxylate reductase ProC (P5CR) (P5C reductase) — —

Not shown: 1 genomes with orthologs for B158DRAFT_0396 only; 18 genomes with orthologs for B158DRAFT_0197 only