Conservation of cofitness between Atu1688 and Atu3755 in Agrobacterium fabrum C58

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1688 indole-3-glycerol-phosphate synthase 1.0 Atu3755 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.85 19
Rhizobium sp. OAE497 0.83 ABIE40_RS09550 indole-3-glycerol phosphate synthase TrpC 0.69 ABIE40_RS16070 5-(carboxyamino)imidazole ribonucleotide synthase — —
Sinorhizobium meliloti 1021 0.78 SMc00236 Indole-3-glycerol phosphate synthase 0.66 SMc04002 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.78 20
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_0756 indole-3-glycerol phosphate synthase 0.36 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase — —
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_0756 indole-3-glycerol phosphate synthase 0.36 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase — —
Rhodopseudomonas palustris CGA009 0.67 TX73_014985 indole-3-glycerol phosphate synthase TrpC 0.42 TX73_021645 5-(carboxyamino)imidazole ribonucleotide synthase — —
Bosea sp. OAE506 0.58 ABIE41_RS17425 indole-3-glycerol phosphate synthase TrpC 0.42 ABIE41_RS09245 5-(carboxyamino)imidazole ribonucleotide synthase — —
Phaeobacter inhibens DSM 17395 0.56 PGA1_c16910 indole-3-glycerol phosphate synthase TrpC 0.46 PGA1_c24870 phosphoribosylaminoimidazole carboxylase ATPase subunit PurK — —
Azospirillum sp. SherDot2 0.55 MPMX19_01014 Indole-3-glycerol phosphate synthase 0.39 MPMX19_01418 N5-carboxyaminoimidazole ribonucleotide synthase — —
Caulobacter crescentus NA1000 0.54 CCNA_01976 Indole-3-glycerol phosphate synthase 0.45 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit 0.82 51
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_01976 Indole-3-glycerol phosphate synthase 0.45 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.54 A4249_RS06175 indole-3-glycerol phosphate synthase TrpC 0.43 A4249_RS08935 5-(carboxyamino)imidazole ribonucleotide synthase — —
Dinoroseobacter shibae DFL-12 0.53 Dshi_1800 Indole-3-glycerol-phosphate synthase (RefSeq) 0.48 Dshi_0680 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) — —
Azospirillum brasilense Sp245 0.53 AZOBR_RS07450 indole-3-glycerol-phosphate synthase 0.42 AZOBR_RS06140 phosphoribosylaminoimidazole carboxylase — —
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_12280 trpC indole-3-glycerol phosphate synthase TrpC 0.36 OKGIIK_03050 purK 5-(carboxyamino)imidazole ribonucleotide synthase — —
Sphingomonas koreensis DSMZ 15582 0.51 Ga0059261_0930 indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.39 Ga0059261_1428 5-(carboxyamino)imidazole ribonucleotide synthase — —
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS12065 indole-3-glycerol phosphate synthase TrpC 0.33 ABZR86_RS09830 5-(carboxyamino)imidazole ribonucleotide synthase — —
Magnetospirillum magneticum AMB-1 0.50 AMB_RS14415 indole-3-glycerol phosphate synthase TrpC 0.38 AMB_RS11140 5-(carboxyamino)imidazole ribonucleotide synthase — —
Lysobacter sp. OAE881 0.50 ABIE51_RS04190 indole-3-glycerol phosphate synthase TrpC 0.37 ABIE51_RS15390 5-(carboxyamino)imidazole ribonucleotide synthase low > 62
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.622.1 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.36 Xcc-8004.2012.1 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.74 43
Marinobacter adhaerens HP15 0.50 HP15_3291 indole-3-glycerol phosphate synthase 0.34 HP15_2350 phosphoribosylaminoimidazole carboxylase ATPase subunit — —
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS18310 indole-3-glycerol-phosphate synthase 0.35 RR42_RS03230 phosphoribosylaminoimidazole carboxylase — —
Rhodospirillum rubrum S1H 0.49 Rru_A1897 Indole-3-glycerol-phosphate synthase (NCBI) 0.40 Rru_A1051 Phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI) low > 58
Pseudomonas simiae WCS417 0.48 PS417_25710 indole-3-glycerol-phosphate synthase 0.36 PS417_28115 phosphoribosylaminoimidazole carboxylase — —
Pseudomonas fluorescens SBW25-INTG 0.48 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.36 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase — —
Pseudomonas fluorescens SBW25 0.48 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.36 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase — —
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_07210 indole-3-glycerol-phosphate synthase 0.36 AO353_09935 phosphoribosylaminoimidazole carboxylase — —
Ralstonia solanacearum GMI1000 0.47 RS_RS14450 Indole-3-glycerol phosphate synthase 1 0.32 RS_RS02885 5-(carboxyamino)imidazole ribonucleotide synthase — —
Pseudomonas sp. S08-1 0.47 OH686_15140 Indole-3-glycerol phosphate synthase 0.38 OH686_13380 N5-carboxyaminoimidazole ribonucleotide synthase — —
Pseudomonas stutzeri RCH2 0.47 Psest_3647 Indole-3-glycerol phosphate synthase 0.38 Psest_4068 phosphoribosylaminoimidazole carboxylase, PurK protein — —
Ralstonia solanacearum PSI07 0.47 RPSI07_RS10735 indole-3-glycerol phosphate synthase TrpC 0.32 RPSI07_RS21130 5-(carboxyamino)imidazole ribonucleotide synthase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.47 GFF3111 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.34 GFF2770 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) — —
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS11570 indole-3-glycerol phosphate synthase TrpC 0.35 LRK54_RS13815 5-(carboxyamino)imidazole ribonucleotide synthase — —
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_2549 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.36 Pf1N1B4_2028 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) — —
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS02160 indole-3-glycerol phosphate synthase TrpC 0.32 ABZR87_RS08090 5-(carboxyamino)imidazole ribonucleotide synthase — —
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_1222 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.36 PfGW456L13_747 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) — —
Variovorax sp. OAS795 0.47 ABID97_RS05280 indole-3-glycerol phosphate synthase TrpC 0.34 ABID97_RS01700 5-(carboxyamino)imidazole ribonucleotide synthase — —
Acidovorax sp. GW101-3H11 0.47 Ac3H11_772 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.31 Ac3H11_675 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) — —
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_14440 indole-3-glycerol-phosphate synthase 0.37 AO356_11075 phosphoribosylaminoimidazole carboxylase — —
Pseudomonas sp. RS175 0.46 PFR28_04043 Indole-3-glycerol phosphate synthase 0.38 PFR28_04495 N5-carboxyaminoimidazole ribonucleotide synthase — —
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_4826 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.38 Pf6N2E2_4081 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) — —
Dechlorosoma suillum PS 0.46 Dsui_0168 Indole-3-glycerol phosphate synthase 0.32 Dsui_0091 phosphoribosylaminoimidazole carboxylase, PurK protein — —
Castellaniella sp019104865 MT123 0.46 ABCV34_RS10310 indole-3-glycerol phosphate synthase TrpC 0.34 ABCV34_RS00565 5-(carboxyamino)imidazole ribonucleotide synthase — —
Ralstonia solanacearum UW163 0.46 UW163_RS07120 indole-3-glycerol phosphate synthase TrpC 0.31 UW163_RS01410 5-(carboxyamino)imidazole ribonucleotide synthase — —
Rhodanobacter denitrificans MT42 0.46 LRK55_RS11300 indole-3-glycerol phosphate synthase TrpC 0.34 LRK55_RS13530 5-(carboxyamino)imidazole ribonucleotide synthase low > 63
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS06505 indole-3-glycerol phosphate synthase TrpC 0.31 RALBFv3_RS12200 5-(carboxyamino)imidazole ribonucleotide synthase — —
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS19450 indole-3-glycerol-phosphate synthase 0.40 HSERO_RS03370 phosphoribosylaminoimidazole carboxylase — —
Variovorax sp. SCN45 0.45 GFF5890 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.36 GFF5513 N5-carboxyaminoimidazole ribonucleotide synthase (EC 6.3.4.18) — —
Pseudomonas putida KT2440 0.45 PP_0422 Indole-3-glycerol phosphate synthase 0.38 PP_5335 N5-carboxyaminoimidazole ribonucleotide synthase — —
Acinetobacter radioresistens SK82 0.45 MPMX26_00983 Indole-3-glycerol phosphate synthase 0.38 MPMX26_03050 N5-carboxyaminoimidazole ribonucleotide synthase low > 36
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS27565 indole-3-glycerol phosphate synthase TrpC 0.37 QEN71_RS02450 5-(carboxyamino)imidazole ribonucleotide synthase 0.68 84
Paraburkholderia graminis OAS925 0.43 ABIE53_003643 indole-3-glycerol phosphate synthase 0.37 ABIE53_003423 5-(carboxyamino)imidazole ribonucleotide synthase — —
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_05712 indole-3-glycerol phosphate synthase 0.37 H281DRAFT_04185 5-(carboxyamino)imidazole ribonucleotide synthase — —
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS17405 indole-3-glycerol phosphate synthase 0.37 BPHYT_RS16245 phosphoribosylaminoimidazole carboxylase 0.62 57
Pedobacter sp. GW460-11-11-14-LB5 0.36 CA265_RS22900 indole-3-glycerol phosphate synthase 0.26 CA265_RS07745 5-(carboxyamino)imidazole ribonucleotide synthase — —
Synechococcus elongatus PCC 7942 0.33 Synpcc7942_1197 trpC indole-3-glycerol-phosphate synthase 0.30 Synpcc7942_1428 purK phosphoribosylaminoimidazole carboxylase ATPase subunit — —
Bacteroides thetaiotaomicron VPI-5482 0.32 BT0529 indole-3-glycerol phosphate synthase (NCBI ptt file) 0.15 BT0704 phosphoribosylglycinamide formyltransferase 2 (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.31 BACOVA_03783 indole-3-glycerol phosphate synthase 0.14 BACOVA_02411 phosphoribosylglycinamide formyltransferase 2 low > 94
Echinicola vietnamensis KMM 6221, DSM 17526 0.31 Echvi_2508 Indole-3-glycerol phosphate synthase 0.29 Echvi_0884 phosphoribosylaminoimidazole carboxylase, PurK protein — —
Parabacteroides merdae CL09T00C40 0.31 HMPREF1078_RS00130 indole-3-glycerol phosphate synthase TrpC 0.15 HMPREF1078_RS10980 formate-dependent phosphoribosylglycinamide formyltransferase low > 61
Mucilaginibacter yixingensis YX-36 DSM 26809 0.30 ABZR88_RS16605 indole-3-glycerol phosphate synthase TrpC 0.27 ABZR88_RS09290 5-(carboxyamino)imidazole ribonucleotide synthase — —
Mycobacterium tuberculosis H37Rv 0.29 Rv1611 Probable indole-3-glycerol phosphate synthase TrpC 0.25 Rv3276c Probable phosphoribosylaminoimidazole carboxylase ATPase subunit PurK (air carboxylase) (AIRC) — —
Bacteroides stercoris CC31F 0.27 HMPREF1181_RS15340 indole-3-glycerol phosphate synthase TrpC 0.15 HMPREF1181_RS16250 formate-dependent phosphoribosylglycinamide formyltransferase low > 56
Phocaeicola dorei CL03T12C01 0.26 ABI39_RS21065 indole-3-glycerol phosphate synthase TrpC 0.14 ABI39_RS14185 formate-dependent phosphoribosylglycinamide formyltransferase low > 72
Phocaeicola vulgatus CL09T03C04 0.26 HMPREF1058_RS07190 indole-3-glycerol phosphate synthase TrpC 0.14 HMPREF1058_RS17920 formate-dependent phosphoribosylglycinamide formyltransferase low > 67
Methanococcus maripaludis JJ 0.20 MMJJ_RS09165 indole-3-glycerol phosphate synthase TrpC 0.17 MMJJ_RS04770 formate-dependent phosphoribosylglycinamide formyltransferase — —
Methanococcus maripaludis S2 0.20 MMP_RS05215 indole-3-glycerol phosphate synthase TrpC 0.18 MMP_RS00715 formate-dependent phosphoribosylglycinamide formyltransferase — —
Desulfovibrio vulgaris Hildenborough JW710 0.19 DVU0468 trpC indole-3-glycerol phosphate synthase (TIGR) 0.15 DVU0723 purT phosphoribosylglycinamide formyltransferase 2 (TIGR) low > 55

Not shown: 0 genomes with orthologs for Atu1688 only; 35 genomes with orthologs for Atu3755 only