Conservation of cofitness between Atu0029 and Atu2264 in Agrobacterium fabrum C58

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0029 S-adenosylhomocysteine hydrolase 1.0 Atu2264 2-isopropylmalate synthase 0.69 18
Sinorhizobium meliloti 1021 0.88 SMc02755 S-adenosyl-L-homocysteine hydrolase 0.88 SMc02717 2-isopropylmalate synthase 0.90 21
Rhizobium sp. OAE497 0.88 ABIE40_RS19385 adenosylhomocysteinase 0.87 ABIE40_RS13330 2-isopropylmalate synthase low > 107
Dinoroseobacter shibae DFL-12 0.80 Dshi_3426 adenosylhomocysteinase (RefSeq) 0.12 Dshi_0596 2-isopropylmalate synthase (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.80 PGA1_c35420 adenosylhomocysteinase AhcY 0.11 PGA1_c26470 2-isopropylmalate synthase LeuA low > 62
Rhodospirillum rubrum S1H 0.73 Rru_A3444 Adenosylhomocysteinase (NCBI) 0.59 Rru_A1928 Yeast 2-isopropylmalate synthase (NCBI) — —
Magnetospirillum magneticum AMB-1 0.72 AMB_RS22210 adenosylhomocysteinase 0.55 AMB_RS17550 2-isopropylmalate synthase — —
Bosea sp. OAE506 0.71 ABIE41_RS02700 adenosylhomocysteinase 0.11 ABIE41_RS13000 2-isopropylmalate synthase — —
Rhodopseudomonas palustris CGA009 0.71 TX73_020805 adenosylhomocysteinase 0.50 TX73_024250 2-isopropylmalate synthase — —
Caulobacter crescentus NA1000 Δfur 0.70 CCNA_00257 adenosylhomocysteinase 0.10 CCNA_01610 2-isopropylmalate synthase low > 67
Caulobacter crescentus NA1000 0.70 CCNA_00257 adenosylhomocysteinase 0.10 CCNA_01610 2-isopropylmalate synthase low > 66
Dechlorosoma suillum PS 0.69 Dsui_0642 adenosylhomocysteinase 0.51 Dsui_3227 2-isopropylmalate synthase — —
Sphingomonas koreensis DSMZ 15582 0.69 Ga0059261_4018 adenosylhomocysteinase (EC 3.3.1.1) 0.51 Ga0059261_4031 2-isopropylmalate synthase, yeast type — —
Paraburkholderia graminis OAS925 0.68 ABIE53_000063 adenosylhomocysteinase 0.50 ABIE53_002867 2-isopropylmalate synthase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.68 H281DRAFT_05799 adenosylhomocysteinase 0.51 H281DRAFT_00385 2-isopropylmalate synthase — —
Burkholderia phytofirmans PsJN 0.67 BPHYT_RS18715 adenosylhomocysteinase 0.50 BPHYT_RS13280 2-isopropylmalate synthase — —
Herbaspirillum seropedicae SmR1 0.67 HSERO_RS21435 S-adenosyl-L-homocysteine hydrolase 0.52 HSERO_RS17185 2-isopropylmalate synthase — —
Ralstonia solanacearum UW163 0.67 UW163_RS03695 adenosylhomocysteinase 0.53 UW163_RS17345 2-isopropylmalate synthase — —
Ralstonia solanacearum IBSBF1503 0.67 RALBFv3_RS09885 adenosylhomocysteinase 0.53 RALBFv3_RS21840 2-isopropylmalate synthase — —
Ralstonia solanacearum GMI1000 0.67 RS_RS00470 adenosylhomocysteinase 0.51 RS_RS18695 2-isopropylmalate synthase 2 — —
Ralstonia sp. UNC404CL21Col 0.67 ABZR87_RS04855 adenosylhomocysteinase 0.52 ABZR87_RS22365 2-isopropylmalate synthase — —
Castellaniella sp019104865 MT123 0.67 ABCV34_RS13540 adenosylhomocysteinase 0.48 ABCV34_RS12420 2-isopropylmalate synthase — —
Cupriavidus basilensis FW507-4G11 0.67 RR42_RS01375 S-adenosyl-L-homocysteine hydrolase 0.49 RR42_RS21205 2-isopropylmalate synthase — —
Ralstonia solanacearum PSI07 0.66 RPSI07_RS23485 adenosylhomocysteinase 0.52 RPSI07_RS01320 2-isopropylmalate synthase — —
Variovorax sp. OAS795 0.66 ABID97_RS25025 adenosylhomocysteinase 0.50 ABID97_RS14905 2-isopropylmalate synthase — —
Variovorax sp. SCN45 0.66 GFF2053 Adenosylhomocysteinase (EC 3.3.1.1) 0.50 GFF1164 2-isopropylmalate synthase (EC 2.3.3.13) — —
Acidovorax sp. GW101-3H11 0.65 Ac3H11_3043 Adenosylhomocysteinase (EC 3.3.1.1) 0.46 Ac3H11_5000 2-isopropylmalate synthase (EC 2.3.3.13) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.63 GFF1694 Adenosylhomocysteinase (EC 3.3.1.1) 0.50 GFF4280 2-isopropylmalate synthase (EC 2.3.3.13) — —
Parabacteroides merdae CL09T00C40 0.61 HMPREF1078_RS17560 adenosylhomocysteinase 0.12 HMPREF1078_RS16665 2-isopropylmalate synthase low > 61
Bacteroides thetaiotaomicron VPI-5482 0.61 BT2797 adenosylhomocysteinase (NCBI ptt file) 0.10 BT1861 2-isopropylmalate synthase (EC 2.3.3.13) (from data) low > 81
Bacteroides ovatus ATCC 8483 0.61 BACOVA_02021 adenosylhomocysteinase 0.10 BACOVA_04604 2-isopropylmalate synthase low > 94
Xanthomonas campestris pv. campestris strain 8004 0.60 Xcc-8004.4317.1 Adenosylhomocysteinase (EC 3.3.1.1) 0.11 Xcc-8004.1056.1 2-isopropylmalate synthase (EC 2.3.3.13) — —
Lysobacter sp. OAE881 0.60 ABIE51_RS16485 adenosylhomocysteinase 0.11 ABIE51_RS17570 2-isopropylmalate synthase low > 62
Azospirillum sp. SherDot2 0.60 MPMX19_00023 Adenosylhomocysteinase 0.59 MPMX19_01822 2-isopropylmalate synthase — —
Azospirillum brasilense Sp245 0.59 AZOBR_RS19045 S-adenosyl-L-homocysteine hydrolase 0.58 AZOBR_RS12155 2-isopropylmalate synthase — —
Mycobacterium tuberculosis H37Rv 0.59 Rv3248c Probable adenosylhomocysteinase SahH (S-adenosyl-L-homocysteine hydrolase) (adohcyase) 0.52 Rv3710 2-isopropylmalate synthase LeuA (alpha-isopropylmalate synthase) (alpha-IPM synthetase) (IPMS) — —
Rhodanobacter sp. FW510-T8 0.58 OKGIIK_11825 ahcY adenosylhomocysteinase 0.10 OKGIIK_13575 leuA 2-isopropylmalate synthase — —
Rhodanobacter denitrificans FW104-10B01 0.58 LRK54_RS12070 adenosylhomocysteinase 0.10 LRK54_RS10345 2-isopropylmalate synthase — —
Rhodanobacter denitrificans MT42 0.58 LRK55_RS11805 adenosylhomocysteinase 0.10 LRK55_RS09985 2-isopropylmalate synthase — —
Dyella japonica UNC79MFTsu3.2 0.56 ABZR86_RS11565 adenosylhomocysteinase 0.11 ABZR86_RS15970 2-isopropylmalate synthase — —
Desulfovibrio vulgaris Hildenborough JW710 0.55 DVU0607 ahcY adenosylhomocysteinase (TIGR) 0.12 DVU2981 leuA 2-isopropylmalate synthase (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.54 DvMF_2580 S-adenosyl-L-homocysteine hydrolase (RefSeq) 0.13 DvMF_1791 2-isopropylmalate synthase (RefSeq) — —
Marinobacter adhaerens HP15 0.46 HP15_2916 adenosylhomocysteinase 0.48 HP15_2055 2-isopropylmalate synthase — —
Acinetobacter radioresistens SK82 0.45 MPMX26_01003 Adenosylhomocysteinase 0.50 MPMX26_00404 2-isopropylmalate synthase low > 36
Pseudomonas putida KT2440 0.45 PP_4976 Adenosylhomocysteinase 0.54 PP_1025 2-isopropylmalate synthase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_0460 adenosylhomocysteinase 0.53 Psyr_1257 2-isopropylmalate synthase — —
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_0460 adenosylhomocysteinase 0.53 Psyr_1257 2-isopropylmalate synthase — —
Pseudomonas sp. RS175 0.44 PFR28_04201 Adenosylhomocysteinase 0.53 PFR28_00305 2-isopropylmalate synthase — —
Pseudomonas stutzeri RCH2 0.44 Psest_0314 adenosylhomocysteinase 0.55 Psest_1277 2-isopropylmalate synthase, yeast type — —
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_1051 Adenosylhomocysteinase (EC 3.3.1.1) 0.52 PfGW456L13_4854 2-isopropylmalate synthase (EC 2.3.3.13) — —
Pseudomonas sp. S08-1 0.44 OH686_10815 adenosylhomocysteinase 0.52 OH686_17570 2-isopropylmalate synthase — —
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS28160 adenosylhomocysteinase 0.53 PFLU_RS24765 2-isopropylmalate synthase — —
Pseudomonas fluorescens SBW25 0.44 PFLU_RS28160 adenosylhomocysteinase 0.53 PFLU_RS24765 2-isopropylmalate synthase — —
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_13610 adenosylhomocysteinase 0.53 AO356_06550 2-isopropylmalate synthase — —
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_08010 adenosylhomocysteinase 0.53 AO353_15925 2-isopropylmalate synthase — —
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_2385 Adenosylhomocysteinase (EC 3.3.1.1) 0.53 Pf1N1B4_847 2-isopropylmalate synthase (EC 2.3.3.13) — —
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_4639 Adenosylhomocysteinase (EC 3.3.1.1) 0.53 Pf6N2E2_3170 2-isopropylmalate synthase (EC 2.3.3.13) — —
Pseudomonas simiae WCS417 0.43 PS417_26505 adenosylhomocysteinase 0.53 PS417_23110 2-isopropylmalate synthase — —
Methanococcus maripaludis S2 0.32 MMP_RS04775 adenosylhomocysteinase 0.10 MMP_RS05500 2-isopropylmalate synthase low > 25
Methanococcus maripaludis JJ 0.31 MMJJ_RS00360 adenosylhomocysteinase 0.10 MMJJ_RS08870 2-isopropylmalate synthase low > 28
Synechococcus elongatus PCC 7942 0.29 Synpcc7942_0618 ahcY S-adenosyl-L-homocysteine hydrolase 0.09 Synpcc7942_1410 leuA 2-isopropylmalate synthase — —
Alteromonas macleodii MIT1002 0.13 MIT1002_03274 Adenosylhomocysteinase 0.09 MIT1002_00949 2-isopropylmalate synthase low > 70
Serratia liquefaciens MT49 0.13 IAI46_06815 adenosylhomocysteinase 0.49 IAI46_09630 2-isopropylmalate synthase low > 86
Klebsiella michiganensis M5al 0.13 BWI76_RS18745 adenosylhomocysteinase 0.46 BWI76_RS22105 2-isopropylmalate synthase low > 92

Not shown: 7 genomes with orthologs for Atu0029 only; 31 genomes with orthologs for Atu2264 only