Conservation of cofitness between Atu1688 and Atu1687 in Agrobacterium fabrum C58

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1688 indole-3-glycerol-phosphate synthase 1.0 Atu1687 anthranilate phosphoribosyltransferase 0.96 1
Rhizobium sp. OAE497 0.83 ABIE40_RS09550 indole-3-glycerol phosphate synthase TrpC 0.78 ABIE40_RS09545 anthranilate phosphoribosyltransferase — —
Sinorhizobium meliloti 1021 0.78 SMc00236 Indole-3-glycerol phosphate synthase 0.75 SMc00235 anthranilate phosphoribosyltransferase 0.96 1
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_0756 indole-3-glycerol phosphate synthase 0.38 Psyr_4580 anthranilate phosphoribosyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_0756 indole-3-glycerol phosphate synthase 0.38 Psyr_4580 anthranilate phosphoribosyltransferase low > 86
Rhodopseudomonas palustris CGA009 0.67 TX73_014985 indole-3-glycerol phosphate synthase TrpC 0.63 TX73_014980 anthranilate phosphoribosyltransferase — —
Bosea sp. OAE506 0.58 ABIE41_RS17425 indole-3-glycerol phosphate synthase TrpC 0.57 ABIE41_RS17420 anthranilate phosphoribosyltransferase — —
Phaeobacter inhibens DSM 17395 0.56 PGA1_c16910 indole-3-glycerol phosphate synthase TrpC 0.44 PGA1_c16890 anthranilate phosphoribosyltransferase TrpD — —
Azospirillum sp. SherDot2 0.55 MPMX19_01014 Indole-3-glycerol phosphate synthase 0.55 MPMX19_01015 Anthranilate phosphoribosyltransferase 0.68 35
Brevundimonas sp. GW460-12-10-14-LB2 0.54 A4249_RS06175 indole-3-glycerol phosphate synthase TrpC 0.44 A4249_RS06170 anthranilate phosphoribosyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_01976 Indole-3-glycerol phosphate synthase 0.49 CCNA_01975 anthranilate phosphoribosyltransferase low > 67
Caulobacter crescentus NA1000 0.54 CCNA_01976 Indole-3-glycerol phosphate synthase 0.49 CCNA_01975 anthranilate phosphoribosyltransferase 0.99 1
Dinoroseobacter shibae DFL-12 0.53 Dshi_1800 Indole-3-glycerol-phosphate synthase (RefSeq) 0.47 Dshi_1799 anthranilate phosphoribosyltransferase (RefSeq) — —
Azospirillum brasilense Sp245 0.53 AZOBR_RS07450 indole-3-glycerol-phosphate synthase 0.57 AZOBR_RS07455 anthranilate phosphoribosyltransferase 0.75 30
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_12280 trpC indole-3-glycerol phosphate synthase TrpC 0.33 OKGIIK_12285 trpD anthranilate phosphoribosyltransferase low > 52
Sphingomonas koreensis DSMZ 15582 0.51 Ga0059261_0930 indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.33 Ga0059261_0929 anthranilate phosphoribosyltransferase 0.97 4
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS12065 indole-3-glycerol phosphate synthase TrpC 0.34 ABZR86_RS12070 anthranilate phosphoribosyltransferase 0.96 4
Magnetospirillum magneticum AMB-1 0.50 AMB_RS14415 indole-3-glycerol phosphate synthase TrpC 0.52 AMB_RS14410 anthranilate phosphoribosyltransferase — —
Lysobacter sp. OAE881 0.50 ABIE51_RS04190 indole-3-glycerol phosphate synthase TrpC 0.33 ABIE51_RS04180 anthranilate phosphoribosyltransferase 0.89 4
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.622.1 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.35 Xcc-8004.621.1 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.94 4
Marinobacter adhaerens HP15 0.50 HP15_3291 indole-3-glycerol phosphate synthase 0.40 HP15_3290 anthranilate phosphoribosyltransferase 0.89 2
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS18310 indole-3-glycerol-phosphate synthase 0.35 RR42_RS18305 anthranilate phosphoribosyltransferase 0.39 1
Rhodospirillum rubrum S1H 0.49 Rru_A1897 Indole-3-glycerol-phosphate synthase (NCBI) 0.54 Rru_A1896 Anthranilate phosphoribosyl transferase (NCBI) 0.93 10
Pseudomonas simiae WCS417 0.48 PS417_25710 indole-3-glycerol-phosphate synthase 0.34 PS417_25715 anthranilate phosphoribosyltransferase 0.86 4
Pseudomonas fluorescens SBW25-INTG 0.48 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.34 PFLU_RS27370 anthranilate phosphoribosyltransferase 0.94 1
Pseudomonas fluorescens SBW25 0.48 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.34 PFLU_RS27370 anthranilate phosphoribosyltransferase 0.83 1
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_07210 indole-3-glycerol-phosphate synthase 0.35 AO353_07215 anthranilate phosphoribosyltransferase 0.96 3
Pseudomonas stutzeri RCH2 0.47 Psest_3647 Indole-3-glycerol phosphate synthase 0.40 Psest_3648 anthranilate phosphoribosyltransferase 0.95 1
Ralstonia solanacearum GMI1000 0.47 RS_RS14450 Indole-3-glycerol phosphate synthase 1 0.55 RS_RS20385 Anthranilate phosphoribosyltransferase 2 — —
Pseudomonas sp. S08-1 0.47 OH686_15140 Indole-3-glycerol phosphate synthase 0.40 OH686_15135 Anthranilate phosphoribosyltransferase 0.81 21
Ralstonia solanacearum PSI07 0.47 RPSI07_RS10735 indole-3-glycerol phosphate synthase TrpC 0.55 RPSI07_RS02570 anthranilate phosphoribosyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.47 GFF3111 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.33 GFF3110 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.94 2
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_2549 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.36 Pf1N1B4_2548 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.93 7
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS02160 indole-3-glycerol phosphate synthase TrpC 0.35 ABZR87_RS02155 anthranilate phosphoribosyltransferase 0.86 11
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_1222 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.35 PfGW456L13_1221 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.98 3
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS11570 indole-3-glycerol phosphate synthase TrpC 0.34 LRK54_RS11565 anthranilate phosphoribosyltransferase 0.76 3
Acidovorax sp. GW101-3H11 0.47 Ac3H11_772 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.33 Ac3H11_771 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.98 2
Variovorax sp. OAS795 0.47 ABID97_RS05280 indole-3-glycerol phosphate synthase TrpC 0.36 ABID97_RS05275 anthranilate phosphoribosyltransferase 0.62 6
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_14440 indole-3-glycerol-phosphate synthase 0.35 AO356_14435 anthranilate phosphoribosyltransferase 0.96 1
Pseudomonas sp. RS175 0.46 PFR28_04043 Indole-3-glycerol phosphate synthase 0.36 PFR28_04044 Anthranilate phosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_4826 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.36 Pf6N2E2_4825 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.97 2
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS06505 indole-3-glycerol phosphate synthase TrpC 0.55 RALBFv3_RS20295 anthranilate phosphoribosyltransferase — —
Ralstonia solanacearum UW163 0.46 UW163_RS07120 indole-3-glycerol phosphate synthase TrpC 0.55 UW163_RS18880 anthranilate phosphoribosyltransferase — —
Rhodanobacter denitrificans MT42 0.46 LRK55_RS11300 indole-3-glycerol phosphate synthase TrpC 0.34 LRK55_RS11295 anthranilate phosphoribosyltransferase low > 63
Dechlorosoma suillum PS 0.46 Dsui_0168 Indole-3-glycerol phosphate synthase 0.38 Dsui_0169 anthranilate phosphoribosyltransferase — —
Castellaniella sp019104865 MT123 0.46 ABCV34_RS10310 indole-3-glycerol phosphate synthase TrpC 0.29 ABCV34_RS10305 anthranilate phosphoribosyltransferase — —
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS19450 indole-3-glycerol-phosphate synthase 0.33 HSERO_RS19445 anthranilate phosphoribosyltransferase 0.94 1
Variovorax sp. SCN45 0.45 GFF5890 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.34 GFF5891 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) — —
Pseudomonas putida KT2440 0.45 PP_0422 Indole-3-glycerol phosphate synthase 0.39 PP_0421 Anthranilate phosphoribosyltransferase 0.94 2
Acinetobacter radioresistens SK82 0.45 MPMX26_00983 Indole-3-glycerol phosphate synthase 0.34 MPMX26_00984 Anthranilate phosphoribosyltransferase 0.99 2
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS27565 indole-3-glycerol phosphate synthase TrpC 0.38 QEN71_RS27560 anthranilate phosphoribosyltransferase 0.97 3
Paraburkholderia graminis OAS925 0.43 ABIE53_003643 indole-3-glycerol phosphate synthase 0.38 ABIE53_003642 anthranilate phosphoribosyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_05712 indole-3-glycerol phosphate synthase 0.39 H281DRAFT_05713 anthranilate phosphoribosyltransferase 0.77 6
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS17405 indole-3-glycerol phosphate synthase 0.38 BPHYT_RS17400 anthranilate phosphoribosyltransferase 0.86 4
Pedobacter sp. GW460-11-11-14-LB5 0.36 CA265_RS22900 indole-3-glycerol phosphate synthase 0.26 CA265_RS05010 anthranilate phosphoribosyltransferase (EC 2.4.2.18) (from data) 0.66 1
Synechococcus elongatus PCC 7942 0.33 Synpcc7942_1197 trpC indole-3-glycerol-phosphate synthase 0.24 Synpcc7942_2123 trpD anthranilate phosphoribosyltransferase — —
Bacteroides thetaiotaomicron VPI-5482 0.32 BT0529 indole-3-glycerol phosphate synthase (NCBI ptt file) 0.25 BT0530 anthranilate phosphoribosyltransferase (EC 2.4.2.18) (from data) 0.83 12
Bacteroides ovatus ATCC 8483 0.31 BACOVA_03783 indole-3-glycerol phosphate synthase 0.25 BACOVA_03782 anthranilate phosphoribosyltransferase 0.96 5
Echinicola vietnamensis KMM 6221, DSM 17526 0.31 Echvi_2508 Indole-3-glycerol phosphate synthase 0.29 Echvi_2507 anthranilate phosphoribosyltransferase — —
Parabacteroides merdae CL09T00C40 0.31 HMPREF1078_RS00130 indole-3-glycerol phosphate synthase TrpC 0.24 HMPREF1078_RS00135 anthranilate phosphoribosyltransferase 0.97 6
Mucilaginibacter yixingensis YX-36 DSM 26809 0.30 ABZR88_RS16605 indole-3-glycerol phosphate synthase TrpC 0.26 ABZR88_RS10675 anthranilate phosphoribosyltransferase — —
Mycobacterium tuberculosis H37Rv 0.29 Rv1611 Probable indole-3-glycerol phosphate synthase TrpC 0.30 Rv2192c Probable anthranilate phosphoribosyltransferase TrpD — —
Bacteroides stercoris CC31F 0.27 HMPREF1181_RS15340 indole-3-glycerol phosphate synthase TrpC 0.27 HMPREF1181_RS15335 anthranilate phosphoribosyltransferase 0.96 2
Phocaeicola dorei CL03T12C01 0.26 ABI39_RS21065 indole-3-glycerol phosphate synthase TrpC 0.27 ABI39_RS21060 anthranilate phosphoribosyltransferase 0.88 1
Phocaeicola vulgatus CL09T03C04 0.26 HMPREF1058_RS07190 indole-3-glycerol phosphate synthase TrpC 0.27 HMPREF1058_RS07185 anthranilate phosphoribosyltransferase 0.96 1
Methanococcus maripaludis JJ 0.20 MMJJ_RS09165 indole-3-glycerol phosphate synthase TrpC 0.29 MMJJ_RS09170 anthranilate phosphoribosyltransferase — —
Methanococcus maripaludis S2 0.20 MMP_RS05215 indole-3-glycerol phosphate synthase TrpC 0.30 MMP_RS05210 anthranilate phosphoribosyltransferase — —
Desulfovibrio vulgaris Hildenborough JW710 0.19 DVU0468 trpC indole-3-glycerol phosphate synthase (TIGR) 0.29 DVU0467 trpD anthranilate phosphoribosyltransferase (TIGR) 0.99 1

Not shown: 0 genomes with orthologs for Atu1688 only; 16 genomes with orthologs for Atu1687 only