Conservation of cofitness between Atu1100 and Atu0564 in Agrobacterium fabrum C58

81 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1100 hypothetical protein 1.0 Atu0564 flagellar biosynthetic protein 0.31 19
Rhizobium sp. OAE497 0.70 ABIE40_RS06380 YicC/YloC family endoribonuclease 0.70 ABIE40_RS02930 flagellar biosynthesis protein FlhB low > 107
Sinorhizobium meliloti 1021 0.68 SMc00576 hypothetical protein 0.65 SMc03018 flagellar biosynthesis protein FlhB low > 103
Rhodopseudomonas palustris CGA009 0.45 TX73_015880 YicC family protein 0.29 TX73_020135 flagellar biosynthesis protein FlhB low > 86
Bosea sp. OAE506 0.44 ABIE41_RS17740 YicC/YloC family endoribonuclease 0.49 ABIE41_RS05400 EscU/YscU/HrcU family type III secretion system export apparatus switch protein low > 77
Magnetospirillum magneticum AMB-1 0.39 AMB_RS03835 YicC family protein 0.35 AMB_RS03190 flagellar biosynthesis protein FlhB low > 64
Rhodospirillum rubrum S1H 0.38 Rru_A0428 hypothetical protein (NCBI) 0.26 Rru_A2821 Flagellar biosynthetic protein FlhB (NCBI) — —
Azospirillum sp. SherDot2 0.38 MPMX19_00983 hypothetical protein 0.35 MPMX19_06186 Flagellar biosynthetic protein FlhB — —
Phaeobacter inhibens DSM 17395 0.37 PGA1_c15840 TIGR00255 family protein 0.20 PGA1_c35730 flagellar biosynthetic protein FlhB 0.21 58
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_01752 YicC-family protein 0.27 CCNA_01131 flagellar biosynthesis protein FlhB low > 67
Caulobacter crescentus NA1000 0.37 CCNA_01752 YicC-family protein 0.27 CCNA_01131 flagellar biosynthesis protein FlhB low > 66
Azospirillum brasilense Sp245 0.36 AZOBR_RS16330 hypothetical protein 0.35 AZOBR_RS29965 flagellar biosynthesis protein — —
Brevundimonas sp. GW460-12-10-14-LB2 0.35 A4249_RS06780 YicC family protein 0.28 A4249_RS15235 flagellar biosynthesis protein FlhB low > 48
Dinoroseobacter shibae DFL-12 0.30 Dshi_1528 domain of unknown function DUF1732 (RefSeq) 0.23 Dshi_3256 type III secretion exporter (RefSeq) low > 64
Shewanella amazonensis SB2B 0.29 Sama_0319 hypothetical protein (RefSeq) 0.22 Sama_2284 flhB flagellar biosynthesis protein FlhB (RefSeq) low > 62
Shewanella sp. ANA-3 0.29 Shewana3_3778 hypothetical protein (RefSeq) 0.22 Shewana3_1355 flhB flagellar biosynthesis protein FlhB (RefSeq) low > 73
Shewanella loihica PV-4 0.28 Shew_3489 hypothetical protein (RefSeq) 0.23 Shew_1379 flhB flagellar biosynthesis protein FlhB (RefSeq) low > 60
Pseudomonas putida KT2440 0.28 PP_5295 conserved protein of unknown function 0.24 PP_4352 flagellin export apparatus, substrate specificity protein low > 96
Shewanella oneidensis MR-1 0.28 SO4257 conserved hypothetical protein TIGR00255 (NCBI ptt file) 0.22 SO3215 flhB flagellar biosynthetic protein FlhB (NCBI ptt file) low > 76
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_12495 hypothetical protein 0.25 AO356_03755 flagellar biosynthetic protein FlhB low > 104
Vibrio cholerae E7946 ATCC 55056 0.27 CSW01_01110 YicC family protein 0.24 CSW01_10580 flagellar biosynthesis protein FlhB low > 62
Pseudomonas sp. RS175 0.27 PFR28_04421 hypothetical protein 0.25 PFR28_00848 Flagellar biosynthetic protein FlhB — —
Pseudomonas stutzeri RCH2 0.27 Psest_3814 TIGR00255 family protein 0.26 Psest_1735 flagellar biosynthetic protein FlhB — —
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_4364 Protein YicC 0.25 Pf6N2E2_2577 Flagellar biosynthesis protein FlhB low > 103
Pseudomonas simiae WCS417 0.27 PS417_27815 hypothetical protein 0.25 PS417_19725 flagellar biosynthesis protein FlhB 0.17 57
Pseudomonas fluorescens SBW25 0.26 PFLU_RS29495 YicC family protein 0.25 PFLU_RS21695 flagellar biosynthesis protein FlhB low > 109
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS29495 YicC family protein 0.25 PFLU_RS21695 flagellar biosynthesis protein FlhB low > 109
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_09265 hypothetical protein 0.25 AO353_18760 flagellar biosynthetic protein FlhB low > 101
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_783 Protein YicC 0.26 PfGW456L13_4336 Flagellar biosynthesis protein FlhB low > 87
Pseudomonas fluorescens FW300-N1B4 0.26 Pf1N1B4_2116 Protein YicC 0.26 Pf1N1B4_3621 Flagellar biosynthesis protein FlhB — —
Alteromonas macleodii MIT1002 0.26 MIT1002_04072 hypothetical protein 0.25 MIT1002_01098 Flagellar biosynthetic protein FlhB low > 70
Pantoea sp. MT58 0.26 IAI47_00580 YicC family protein 0.23 IAI47_08345 flagellar type III secretion system protein FlhB low > 76
Xanthomonas campestris pv. campestris strain 8004 0.26 Xcc-8004.1220.1 Protein YicC 0.24 Xcc-8004.2827.1 Flagellar biosynthesis protein FlhB low > 74
Dyella japonica UNC79MFTsu3.2 0.25 ABZR86_RS11895 YicC/YloC family endoribonuclease 0.24 ABZR86_RS20245 flagellar biosynthesis protein FlhB low > 74
Pseudomonas sp. S08-1 0.25 OH686_13565 UPF0701 protein YicC 0.27 OH686_02755 flagellar biosynthetic protein FlhB low > 80
Pseudomonas syringae pv. syringae B728a 0.25 Psyr_0212 Conserved hypothetical protein 255 0.26 Psyr_3441 Flagellar biosynthetic protein FlhB low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.25 Psyr_0212 Conserved hypothetical protein 255 0.26 Psyr_3441 Flagellar biosynthetic protein FlhB low > 86
Rhodanobacter sp. FW510-T8 0.25 OKGIIK_12145 yicC YicC-like family, N-terminal region 0.24 OKGIIK_02810 flhB flagellar biosynthesis protein FlhB — —
Pectobacterium carotovorum WPP14 0.24 HER17_RS20905 YicC family protein 0.26 HER17_RS08135 flagellar type III secretion system protein FlhB low > 75
Dickeya dianthicola ME23 0.24 DZA65_RS00575 YicC family protein 0.25 DZA65_RS14040 flagellar type III secretion system protein FlhB low > 75
Dickeya dadantii 3937 0.24 DDA3937_RS20645 YicC family protein 0.25 DDA3937_RS13510 flagellar type III secretion system protein FlhB low > 74
Dickeya dianthicola 67-19 0.24 HGI48_RS00540 YicC family protein 0.25 HGI48_RS13555 flagellar type III secretion system protein FlhB low > 71
Serratia liquefaciens MT49 0.24 IAI46_24855 YicC family protein 0.24 IAI46_16000 flagellar type III secretion system protein FlhB low > 86
Rhodanobacter denitrificans FW104-10B01 0.24 LRK54_RS11750 YicC family protein 0.25 LRK54_RS13560 flagellar biosynthesis protein FlhB low > 59
Rhodanobacter denitrificans MT42 0.24 LRK55_RS11475 YicC family protein 0.25 LRK55_RS13300 flagellar biosynthesis protein FlhB low > 63
Lysobacter sp. OAE881 0.24 ABIE51_RS17280 YicC/YloC family endoribonuclease 0.27 ABIE51_RS16845 flagellar biosynthesis protein FlhB low > 62
Erwinia tracheiphila SCR3 0.24 LU632_RS22050 YicC family protein 0.23 LU632_RS13510 flhB flagellar type III secretion system protein FlhB low > 74
Enterobacter sp. TBS_079 0.23 MPMX20_00091 hypothetical protein 0.25 MPMX20_02784 Flagellar biosynthetic protein FlhB low > 85
Herbaspirillum seropedicae SmR1 0.23 HSERO_RS10650 hypothetical protein 0.22 HSERO_RS10140 flagellar biosynthesis protein FlhB low > 78
Dechlorosoma suillum PS 0.23 Dsui_0497 TIGR00255 family protein 0.24 Dsui_1722 flagellar biosynthetic protein FlhB low > 51
Escherichia coli BW25113 0.23 b3644 yicC hypothetical protein (NCBI) 0.23 b1880 flhB flagellar biosynthesis protein B (NCBI) low > 76
Burkholderia phytofirmans PsJN 0.23 BPHYT_RS15320 hypothetical protein 0.25 BPHYT_RS18945 flagellar biosynthesis protein FlhB low > 109
Escherichia coli ECRC98 0.23 JDDGAC_19210 yicC UPF0701 protein YicC 0.23 JDDGAC_00740 flhB flagellar biosynthesis protein FlhB — —
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS03650 YicC/YloC family endoribonuclease 0.26 QEN71_RS28960 flagellar biosynthesis protein FlhB low > 153
Escherichia coli ECRC101 0.23 OKFHMN_15585 yicC UPF0701 protein YicC 0.23 OKFHMN_26165 flhB flagellar biosynthesis protein FlhB — —
Escherichia coli ECRC99 0.23 KEDOAH_12560 yicC UPF0701 protein YicC 0.23 KEDOAH_01940 flhB flagellar biosynthesis protein FlhB — —
Escherichia coli BL21 0.23 ECD_03501 UPF0701 family protein 0.23 ECD_01851 flagellin export apparatus, substrate specificity protein low > 60
Escherichia coli ECRC102 0.23 NIAGMN_13345 yicC UPF0701 protein YicC 0.23 NIAGMN_01895 flhB flagellar biosynthesis protein FlhB — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF365 Protein YicC 0.25 GFF1661 Flagellar biosynthesis protein FlhB low > 78
Escherichia coli ECOR38 0.23 HEPCGN_14405 yicC UPF0701 protein YicC 0.23 HEPCGN_04585 flhB flagellar biosynthesis protein FlhB low > 85
Escherichia coli ECRC101 0.23 MCAODC_06095 yicC UPF0701 protein YicC 0.23 MCAODC_19240 flhB flagellar biosynthesis protein FlhB — —
Escherichia coli ECRC62 0.23 BNILDI_04050 yicC UPF0701 protein YicC 0.23 BNILDI_15395 flhB flagellar biosynthesis protein FlhB — —
Escherichia coli ECOR27 0.23 NOLOHH_07465 yicC UPF0701 protein YicC 0.23 NOLOHH_16605 flhB flagellar biosynthesis protein FlhB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_00058 hypothetical protein 0.23 OHPLBJKB_01848 Flagellar biosynthetic protein FlhB low > 73
Ralstonia solanacearum GMI1000 0.23 RS_RS10815 YicC family protein 0.24 RS_RS23850 flagellar type III secretion system protein FlhB — —
Ralstonia solanacearum PSI07 0.22 RPSI07_RS13855 YicC family protein 0.24 RPSI07_RS06185 flagellar type III secretion system protein FlhB low > 81
Paraburkholderia graminis OAS925 0.22 ABIE53_003233 uncharacterized protein (TIGR00255 family) 0.24 ABIE53_000114 flagellar biosynthetic protein FlhB low > 113
Escherichia coli Nissle 1917 0.22 ECOLIN_RS20760 YicC/YloC family endoribonuclease 0.23 ECOLIN_RS10740 flagellar biosynthesis protein FlhB low > 52
Paraburkholderia bryophila 376MFSha3.1 0.22 H281DRAFT_04007 TIGR00255 family protein 0.24 H281DRAFT_05752 flagellar biosynthetic protein FlhB low > 103
Ralstonia solanacearum UW163 0.22 UW163_RS10390 YicC family protein 0.22 UW163_RS21685 flagellar type III secretion system protein FlhB — —
Escherichia fergusonii Becca 0.22 EFB2_00169 hypothetical protein 0.23 EFB2_02063 Flagellar biosynthetic protein FlhB low > 86
Ralstonia solanacearum IBSBF1503 0.22 RALBFv3_RS03330 YicC family protein 0.22 RALBFv3_RS17465 flagellar type III secretion system protein FlhB low > 76
Rahnella sp. WP5 0.22 EX31_RS14510 YicC family protein 0.18 EX31_RS11345 flagellar type III secretion system protein FlhB low > 89
Enterobacter asburiae PDN3 0.22 EX28DRAFT_3894 TIGR00255 family protein 0.26 EX28DRAFT_0680 flagellar biosynthetic protein FlhB low > 76
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS04905 hypothetical protein 0.25 RR42_RS35770 flagellar biosynthesis protein FlhB — —
Variovorax sp. SCN45 0.21 GFF2378 UPF0701 protein YicC 0.25 GFF5770 Flagellar biosynthesis protein FlhB — —
Ralstonia sp. UNC404CL21Col 0.21 ABZR87_RS15240 YicC/YloC family endoribonuclease 0.24 ABZR87_RS18015 flagellar biosynthesis protein FlhB low > 80
Acidovorax sp. GW101-3H11 0.21 Ac3H11_3667 Protein YicC 0.19 Ac3H11_1385 Flagellar biosynthesis protein FlhB — —
Castellaniella sp019104865 MT123 0.20 ABCV34_RS03510 DUF1732 domain-containing protein 0.26 ABCV34_RS05800 flagellar biosynthesis protein FlhB low > 48
Desulfovibrio vulgaris Miyazaki F 0.19 DvMF_1140 hypothetical protein (RefSeq) 0.25 DvMF_2015 flhB flagellar biosynthesis protein FlhB (RefSeq) low > 51
Hydrogenophaga sp. GW460-11-11-14-LB1 0.19 GFF3251 Protein YicC 0.21 GFF1432 Flagellar biosynthesis protein FlhB — —
Desulfovibrio vulgaris Hildenborough JW710 0.18 DVU0898 conserved hypothetical protein (TIGR) 0.26 DVU3233 flhB flagellar biosynthetic protein FlhB (TIGR) low > 55

Not shown: 15 genomes with orthologs for Atu1100 only; 1 genomes with orthologs for Atu0564 only