Conservation of cofitness between AO353_16875 and AO353_14380 in Pseudomonas fluorescens FW300-N2E3

84 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E3 1.0 AO353_16875 ribosomal protein S12 methylthiotransferase RimO 1.0 AO353_14380 pantoate--beta-alanine ligase 0.34 5
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_4653 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.95 PfGW456L13_1520 Pantoate--beta-alanine ligase (EC 6.3.2.1) low > 87
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_3160 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.94 Pf1N1B4_2853 Pantoate--beta-alanine ligase (EC 6.3.2.1) low > 87
Pseudomonas sp. RS175 0.97 PFR28_00486 Ribosomal protein S12 methylthiotransferase RimO 0.93 PFR28_03722 Pantothenate synthetase — —
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_05600 ribosomal protein S12 methylthiotransferase RimO 0.92 AO356_16055 pantoate--beta-alanine ligase — —
Pseudomonas fluorescens SBW25-INTG 0.96 PFLU_RS05950 30S ribosomal protein S12 methylthiotransferase RimO 0.84 PFLU_RS25755 pantoate--beta-alanine ligase low > 109
Pseudomonas fluorescens SBW25 0.96 PFLU_RS05950 30S ribosomal protein S12 methylthiotransferase RimO 0.84 PFLU_RS25755 pantoate--beta-alanine ligase low > 109
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_2978 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.92 Pf6N2E2_5152 Pantoate--beta-alanine ligase (EC 6.3.2.1) — —
Pseudomonas simiae WCS417 0.96 PS417_05880 ribosomal protein S12 methylthiotransferase 0.84 PS417_23915 pantoate--beta-alanine ligase low > 88
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_1392 SSU ribosomal protein S12P methylthiotransferase 0.78 Psyr_0827 pantothenate synthetase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_1392 SSU ribosomal protein S12P methylthiotransferase 0.78 Psyr_0827 pantothenate synthetase low > 86
Pseudomonas putida KT2440 0.89 PP_1197 ribosomal protein S12 methylthiotransferase 0.83 PP_4700 pantothenate synthetase 0.16 37
Pseudomonas sp. S08-1 0.85 OH686_18875 ribosomal protein S12 methylthiotransferase RimO 0.77 OH686_17240 pantoate--beta-alanine ligase — —
Pseudomonas stutzeri RCH2 0.83 Psest_2632 ribosomal protein S12 methylthiotransferase RimO 0.74 Psest_0995 pantoate--beta-alanine ligase — —
Castellaniella sp019104865 MT123 0.77 ABCV34_RS14230 30S ribosomal protein S12 methylthiotransferase RimO 0.41 ABCV34_RS14585 pantoate--beta-alanine ligase — —
Marinobacter adhaerens HP15 0.75 HP15_2459 MiaB-like tRNA modifying enzyme YliG 0.63 HP15_323 pantothenate synthetase — —
Erwinia tracheiphila SCR3 0.72 LU632_RS09580 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.51 LU632_RS20105 panC pantoate--beta-alanine ligase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF731 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.51 GFF92 Pantoate--beta-alanine ligase (EC 6.3.2.1) low > 78
Escherichia coli ECRC99 0.72 KEDOAH_21850 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.52 KEDOAH_17750 panC pantoate--beta-alanine ligase — —
Escherichia coli BL21 0.72 ECD_00802 ribosomal protein S12 methylthiotransferase 0.52 ECD_00132 pantothenate synthetase low > 61
Escherichia coli ECRC98 0.72 JDDGAC_09695 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.52 JDDGAC_14000 panC pantoate--beta-alanine ligase low > 86
Escherichia coli ECRC102 0.72 NIAGMN_04105 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.52 NIAGMN_08255 panC pantoate--beta-alanine ligase — —
Escherichia coli ECOR27 0.72 NOLOHH_22430 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.52 NOLOHH_02750 panC pantoate--beta-alanine ligase low > 75
Escherichia coli ECRC62 0.72 BNILDI_20690 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.52 BNILDI_08920 panC pantoate--beta-alanine ligase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_02875 Ribosomal protein S12 methylthiotransferase RimO 0.52 OHPLBJKB_03528 Pantothenate synthetase low > 73
Escherichia coli ECRC101 0.72 MCAODC_25275 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.52 MCAODC_00920 panC pantoate--beta-alanine ligase low > 87
Escherichia coli ECOR38 0.72 HEPCGN_01970 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.52 HEPCGN_08380 panC pantoate--beta-alanine ligase low > 87
Escherichia coli BW25113 0.72 b0835 yliG predicted SAM-dependent methyltransferase (NCBI) 0.52 b0133 panC pantoate--beta-alanine ligase (NCBI) low > 76
Enterobacter asburiae PDN3 0.72 EX28DRAFT_2131 ribosomal protein S12 methylthiotransferase RimO 0.48 EX28DRAFT_3729 pantoate--beta-alanine ligase low > 76
Escherichia coli ECRC100 0.72 OKFHMN_06060 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.52 OKFHMN_10405 panC pantoate--beta-alanine ligase low > 80
Escherichia fergusonii Becca 0.72 EFB2_03271 Ribosomal protein S12 methylthiotransferase RimO 0.53 EFB2_03911 Pantothenate synthetase low > 86
Klebsiella michiganensis M5al 0.72 BWI76_RS09115 30S ribosomal protein S12 methylthiotransferase RimO 0.51 BWI76_RS04990 pantoate--beta-alanine ligase low > 92
Enterobacter sp. TBS_079 0.71 MPMX20_01473 Ribosomal protein S12 methylthiotransferase RimO 0.48 MPMX20_00826 Pantothenate synthetase low > 85
Dickeya dianthicola 67-19 0.71 HGI48_RS09400 30S ribosomal protein S12 methylthiotransferase RimO 0.49 HGI48_RS16075 pantoate--beta-alanine ligase low > 71
Pectobacterium carotovorum WPP14 0.71 HER17_RS12755 30S ribosomal protein S12 methylthiotransferase RimO 0.52 HER17_RS05555 pantoate--beta-alanine ligase low > 75
Azospirillum brasilense Sp245 0.70 AZOBR_RS14980 ribosomal protein S12 methylthiotransferase 0.44 AZOBR_RS09715 pantoate--beta-alanine ligase low > 97
Dickeya dianthicola ME23 0.70 DZA65_RS09710 30S ribosomal protein S12 methylthiotransferase RimO 0.50 DZA65_RS17160 pantoate--beta-alanine ligase low > 75
Dickeya dadantii 3937 0.70 DDA3937_RS09385 30S ribosomal protein S12 methylthiotransferase RimO 0.52 DDA3937_RS15960 pantoate--beta-alanine ligase low > 74
Kangiella aquimarina DSM 16071 0.70 B158DRAFT_2522 SSU ribosomal protein S12P methylthiotransferase (EC 2.-.-.-) 0.53 B158DRAFT_0062 pantoate--beta-alanine ligase — —
Azospirillum sp. SherDot2 0.70 MPMX19_05761 Ribosomal protein S12 methylthiotransferase RimO 0.41 MPMX19_04465 Pantothenate synthetase low > 112
Vibrio cholerae E7946 ATCC 55056 0.70 CSW01_13260 30S ribosomal protein S12 methylthiotransferase RimO 0.52 CSW01_03130 pantoate--beta-alanine ligase — —
Rhodospirillum rubrum S1H 0.69 Rru_A2811 hypothetical protein (NCBI) 0.47 Rru_A3320 Cytidyltransferase-related (NCBI) — —
Acinetobacter radioresistens SK82 0.69 MPMX26_01294 Ribosomal protein S12 methylthiotransferase RimO 0.49 MPMX26_00546 Pantothenate synthetase — —
Alteromonas macleodii MIT1002 0.68 MIT1002_01933 Ribosomal protein S12 methylthiotransferase RimO 0.53 MIT1002_03695 Pantothenate synthetase — —
Bosea sp. OAE506 0.66 ABIE41_RS15895 30S ribosomal protein S12 methylthiotransferase RimO 0.41 ABIE41_RS14875 pantoate--beta-alanine ligase low > 77
Magnetospirillum magneticum AMB-1 0.66 AMB_RS15345 30S ribosomal protein S12 methylthiotransferase RimO 0.48 AMB_RS22115 pantoate--beta-alanine ligase — —
Lysobacter sp. OAE881 0.65 ABIE51_RS08160 30S ribosomal protein S12 methylthiotransferase RimO 0.47 ABIE51_RS08030 pantoate--beta-alanine ligase — —
Ralstonia solanacearum UW163 0.65 UW163_RS14790 30S ribosomal protein S12 methylthiotransferase RimO 0.44 UW163_RS09235 pantoate--beta-alanine ligase — —
Ralstonia solanacearum IBSBF1503 0.65 RALBFv3_RS01480 30S ribosomal protein S12 methylthiotransferase RimO 0.44 RALBFv3_RS04435 pantoate--beta-alanine ligase — —
Ralstonia solanacearum GMI1000 0.65 RS_RS08245 30S ribosomal protein S12 methylthiotransferase RimO 0.45 RS_RS11985 pantoate--beta-alanine ligase — —
Ralstonia solanacearum PSI07 0.65 RPSI07_RS16010 30S ribosomal protein S12 methylthiotransferase RimO 0.43 RPSI07_RS12935 pantoate--beta-alanine ligase — —
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS13275 30S ribosomal protein S12 methylthiotransferase RimO 0.44 ABZR87_RS00030 pantoate--beta-alanine ligase — —
Dechlorosoma suillum PS 0.65 Dsui_2540 ribosomal protein S12 methylthiotransferase RimO 0.45 Dsui_1470 pantoate--beta-alanine ligase — —
Shewanella amazonensis SB2B 0.65 Sama_0485 MiaB-like putative RNA modifying enzyme YliG (RefSeq) 0.52 Sama_0775 panC pantoate--beta-alanine ligase (RefSeq) — —
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS01780 30S ribosomal protein S12 methylthiotransferase RimO 0.49 LRK54_RS15120 pantoate--beta-alanine ligase — —
Rhodanobacter denitrificans MT42 0.64 LRK55_RS01560 30S ribosomal protein S12 methylthiotransferase RimO 0.50 LRK55_RS14835 pantoate--beta-alanine ligase low > 63
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS09170 ribosomal protein S12 methylthiotransferase RimO 0.40 BPHYT_RS04925 pantothenate synthetase — —
Shewanella sp. ANA-3 0.64 Shewana3_3627 MiaB-like tRNA modifying enzyme YliG (RefSeq) 0.52 Shewana3_3409 panC pantoate--beta-alanine ligase (RefSeq) — —
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_04755 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.48 OKGIIK_03890 panC pantoate--beta-alanine ligase low > 52
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS22185 30S ribosomal protein S12 methylthiotransferase RimO 0.43 QEN71_RS25065 pantoate--beta-alanine ligase — —
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS07640 ribosomal protein S12 methylthiotransferase 0.42 RR42_RS16055 pantothenate synthetase — —
Paraburkholderia bryophila 376MFSha3.1 0.63 H281DRAFT_00855 SSU ribosomal protein S12P methylthiotransferase 0.42 H281DRAFT_00150 pantothenate synthetase — —
Dyella japonica UNC79MFTsu3.2 0.63 ABZR86_RS08100 30S ribosomal protein S12 methylthiotransferase RimO 0.48 ABZR86_RS00820 pantoate--beta-alanine ligase — —
Shewanella oneidensis MR-1 0.63 SO4072 yliG MiaB-like putative RNA modifying enzyme YliG (NCBI ptt file) 0.53 SO0869 panC pantoate--beta-alanine ligase (NCBI ptt file) — —
Paraburkholderia graminis OAS925 0.63 ABIE53_002068 ribosomal protein S12 methylthiotransferase 0.42 ABIE53_001260 pantoate--beta-alanine ligase — —
Rhodopseudomonas palustris CGA009 0.63 TX73_013865 30S ribosomal protein S12 methylthiotransferase RimO 0.41 TX73_016310 pantoate--beta-alanine ligase — —
Sphingomonas koreensis DSMZ 15582 0.62 Ga0059261_0282 ribosomal protein S12 methylthiotransferase RimO 0.43 Ga0059261_2453 pantoate--beta-alanine ligase — —
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS15005 ribosomal protein S12 methylthiotransferase 0.43 HSERO_RS15520 pantoate--beta-alanine ligase — —
Dinoroseobacter shibae DFL-12 0.62 Dshi_2618 MiaB-like tRNA modifying enzyme YliG (RefSeq) 0.43 Dshi_2952 pantoate--beta-alanine ligase (RefSeq) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF4923 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.36 GFF1220 Pantoate--beta-alanine ligase (EC 6.3.2.1) — —
Variovorax sp. SCN45 0.61 GFF400 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4) 0.43 GFF2578 Pantoate--beta-alanine ligase (EC 6.3.2.1) low > 127
Variovorax sp. OAS795 0.61 ABID97_RS17220 30S ribosomal protein S12 methylthiotransferase RimO 0.42 ABID97_RS07430 pantoate--beta-alanine ligase low > 91
Acidovorax sp. GW101-3H11 0.60 Ac3H11_364 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.36 Ac3H11_2786 Pantoate--beta-alanine ligase (EC 6.3.2.1) low > 79
Phaeobacter inhibens DSM 17395 0.59 PGA1_c24370 ribosomal protein S12 methylthiotransferase RimO 0.38 PGA1_c32040 pantothenate synthetase PanC — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.32 ABZR88_RS15425 30S ribosomal protein S12 methylthiotransferase RimO 0.37 ABZR88_RS18500 pantoate--beta-alanine ligase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.31 CA264_15685 30S ribosomal protein S12 methylthiotransferase RimO 0.37 CA264_17615 pantoate--beta-alanine ligase — —
Pedobacter sp. GW460-11-11-14-LB5 0.31 CA265_RS16365 30S ribosomal protein S12 methylthiotransferase RimO 0.35 CA265_RS22700 pantoate--beta-alanine ligase — —
Bacteroides ovatus ATCC 8483 0.30 BACOVA_00737 ribosomal protein S12 methylthiotransferase RimO 0.37 BACOVA_05108 pantoate--beta-alanine ligase — —
Bacteroides thetaiotaomicron VPI-5482 0.30 BT0913 putative Fe-S oxidoreductase (NCBI ptt file) 0.37 BT4308 pantoate--beta-alanine ligase (NCBI ptt file) — —
Phocaeicola vulgatus CL09T03C04 0.29 HMPREF1058_RS04095 30S ribosomal protein S12 methylthiotransferase RimO 0.36 HMPREF1058_RS18260 pantoate--beta-alanine ligase — —
Phocaeicola dorei CL03T12C01 0.29 ABI39_RS17125 30S ribosomal protein S12 methylthiotransferase RimO 0.36 ABI39_RS14555 pantoate--beta-alanine ligase — —
Parabacteroides merdae CL09T00C40 0.29 HMPREF1078_RS01815 30S ribosomal protein S12 methylthiotransferase RimO 0.38 HMPREF1078_RS14680 pantoate--beta-alanine ligase low > 61
Bacteroides stercoris CC31F 0.28 HMPREF1181_RS16335 30S ribosomal protein S12 methylthiotransferase RimO 0.38 HMPREF1181_RS06090 pantoate--beta-alanine ligase — —
Desulfovibrio vulgaris Hildenborough JW710 0.24 DVU3151 MiaB-like tRNA modifying enzyme YliG, TIGR01125 (TIGR) 0.37 DVU2448 panC pantoate--beta-alanine ligase (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.23 DvMF_1701 MiaB-like tRNA modifying enzyme YliG (RefSeq) 0.38 DvMF_2942 panC pantoate--beta-alanine ligase (RefSeq) — —

Not shown: 3 genomes with orthologs for AO353_16875 only; 12 genomes with orthologs for AO353_14380 only