| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Dinoroseobacter shibae DFL-12 | 1.0 | Dshi_0083 | | 3-isopropylmalate dehydratase, small subunit (RefSeq) | 1.0 | Dshi_0596 | | 2-isopropylmalate synthase (RefSeq) | 0.78 | 1 |
| Magnetospirillum magneticum AMB-1 | 0.79 | AMB_RS20565 | | 3-isopropylmalate dehydratase small subunit | 0.60 | AMB_RS17765 | | 2-isopropylmalate synthase | — | — |
| Phaeobacter inhibens DSM 17395 | 0.78 | PGA1_c29790 | | 3-isopropylmalate dehydratase small subunit | 0.77 | PGA1_c26470 | | 2-isopropylmalate synthase LeuA | 0.93 | 3 |
| Agrobacterium fabrum C58 | 0.77 | Atu2790 | | 3-isopropylmalate dehydratase, small subunit | 0.13 | Atu2264 | | 2-isopropylmalate synthase | 0.96 | 2 |
| Rhodopseudomonas palustris CGA009 | 0.75 | TX73_001215 | | 3-isopropylmalate dehydratase small subunit | 0.60 | TX73_010545 | | 2-isopropylmalate synthase | — | — |
| Bosea sp. OAE506 | 0.74 | ABIE41_RS11640 | | 3-isopropylmalate dehydratase small subunit | 0.59 | ABIE41_RS13000 | | 2-isopropylmalate synthase | — | — |
| Acinetobacter radioresistens SK82 | 0.61 | MPMX26_00346 | | 3-isopropylmalate dehydratase small subunit 1 | 0.10 | MPMX26_00404 | | 2-isopropylmalate synthase | 0.91 | 23 |
| Pseudomonas stutzeri RCH2 | 0.60 | Psest_2590 | | 3-isopropylmalate dehydratase, small subunit | 0.51 | Psest_1056 | | 2-isopropylmalate synthase, bacterial type | low | > 67 |
| Marinobacter adhaerens HP15 | 0.60 | HP15_1833 | | isopropylmalate isomerase small subunit | 0.50 | HP15_538 | | 2-isopropylmalate synthase | low | > 73 |
| Pseudomonas putida KT2440 | 0.59 | PP_1986 | | 3-isopropylmalate dehydratase small subunit | 0.11 | PP_1025 | | 2-isopropylmalate synthase | 0.84 | 10 |
| Pseudomonas sp. S08-1 | 0.59 | OH686_04475 | | 3-isopropylmalate dehydratase small subunit | 0.11 | OH686_17570 | | 2-isopropylmalate synthase | 0.72 | 21 |
| Ralstonia solanacearum IBSBF1503 | 0.59 | RALBFv3_RS02615 | | 3-isopropylmalate dehydratase small subunit | 0.43 | RALBFv3_RS03025 | | 2-isopropylmalate synthase | low | > 76 |
| Variovorax sp. OAS795 | 0.59 | ABID97_RS08460 | | 3-isopropylmalate dehydratase small subunit | 0.45 | ABID97_RS14910 | | 2-isopropylmalate synthase | — | — |
| Ralstonia solanacearum UW163 | 0.59 | UW163_RS11110 | | 3-isopropylmalate dehydratase small subunit | 0.43 | UW163_RS10700 | | 2-isopropylmalate synthase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.59 | PfGW456L13_3947 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.10 | PfGW456L13_4854 | | 2-isopropylmalate synthase (EC 2.3.3.13) | 0.96 | 6 |
| Pseudomonas sp. RS175 | 0.59 | PFR28_02823 | | 3-isopropylmalate dehydratase small subunit 1 | 0.10 | PFR28_00305 | | 2-isopropylmalate synthase | 0.66 | 3 |
| Dechlorosoma suillum PS | 0.59 | Dsui_3199 | | 3-isopropylmalate dehydratase, small subunit | 0.50 | Dsui_3519 | | 2-isopropylmalate synthase, bacterial type | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.59 | Pf1N1B4_14 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.10 | Pf1N1B4_847 | | 2-isopropylmalate synthase (EC 2.3.3.13) | — | — |
| Pseudomonas simiae WCS417 | 0.59 | PS417_18595 | | 3-isopropylmalate dehydratase | 0.10 | PS417_23110 | | 2-isopropylmalate synthase | 0.91 | 5 |
| Ralstonia solanacearum PSI07 | 0.58 | RPSI07_RS14700 | | 3-isopropylmalate dehydratase small subunit | 0.43 | RPSI07_RS14285 | | 2-isopropylmalate synthase | — | — |
| Burkholderia phytofirmans PsJN | 0.58 | BPHYT_RS33905 | | 3-isopropylmalate dehydratase small subunit | 0.46 | BPHYT_RS06570 | | 2-isopropylmalate synthase | low | > 109 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.58 | Psyr_1984 | | 3-isopropylmalate dehydratase, small subunit | 0.10 | Psyr_1257 | | 2-isopropylmalate synthase | 0.93 | 8 |
| Pseudomonas fluorescens SBW25-INTG | 0.58 | PFLU_RS20575 | | 3-isopropylmalate dehydratase small subunit | 0.09 | PFLU_RS24765 | | 2-isopropylmalate synthase | 0.91 | 3 |
| Caulobacter crescentus NA1000 | 0.58 | CCNA_00195 | | 3-isopropylmalate dehydratase small subunit | 0.60 | CCNA_01610 | | 2-isopropylmalate synthase | low | > 66 |
| Pseudomonas syringae pv. syringae B728a | 0.58 | Psyr_1984 | | 3-isopropylmalate dehydratase, small subunit | 0.10 | Psyr_1257 | | 2-isopropylmalate synthase | 0.93 | 4 |
| Caulobacter crescentus NA1000 Δfur | 0.58 | CCNA_00195 | | 3-isopropylmalate dehydratase small subunit | 0.60 | CCNA_01610 | | 2-isopropylmalate synthase | low | > 67 |
| Pseudomonas fluorescens SBW25 | 0.58 | PFLU_RS20575 | | 3-isopropylmalate dehydratase small subunit | 0.09 | PFLU_RS24765 | | 2-isopropylmalate synthase | 0.71 | 4 |
| Pseudomonas fluorescens FW300-N2E2 | 0.58 | Pf6N2E2_64 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.10 | Pf6N2E2_3170 | | 2-isopropylmalate synthase (EC 2.3.3.13) | 0.94 | 2 |
| Ralstonia solanacearum GMI1000 | 0.58 | RS_RS09995 | | 3-isopropylmalate dehydratase small subunit | 0.43 | RS_RS10395 | | 2-isopropylmalate synthase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.58 | ABZR87_RS14535 | | 3-isopropylmalate dehydratase small subunit | 0.43 | ABZR87_RS14930 | | 2-isopropylmalate synthase | low | > 80 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.58 | H281DRAFT_06073 | | 3-isopropylmalate dehydratase, small subunit | 0.46 | H281DRAFT_04556 | | 2-isopropylmalate synthase | low | > 103 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.58 | GFF3361 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.46 | GFF4281 | | 2-isopropylmalate synthase (EC 2.3.3.13) | 0.58 | 59 |
| Paraburkholderia sabiae LMG 24235 | 0.58 | QEN71_RS17615 | | 3-isopropylmalate dehydratase small subunit | 0.46 | QEN71_RS24195 | | 2-isopropylmalate synthase | low | > 153 |
| Variovorax sp. SCN45 | 0.58 | GFF3889 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.45 | GFF1165 | | 2-isopropylmalate synthase (EC 2.3.3.13) | low | > 127 |
| Pseudomonas fluorescens FW300-N2C3 | 0.58 | AO356_21405 | | 3-isopropylmalate dehydratase | 0.10 | AO356_06550 | | 2-isopropylmalate synthase | 0.96 | 2 |
| Acidovorax sp. GW101-3H11 | 0.57 | Ac3H11_1527 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.45 | Ac3H11_530 | | 2-isopropylmalate synthase (EC 2.3.3.13) | low | > 79 |
| Paraburkholderia graminis OAS925 | 0.57 | ABIE53_004803 | | 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit | 0.46 | ABIE53_001580 | | 2-isopropylmalate synthase | low | > 113 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.56 | Xcc-8004.1050.1 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.41 | Xcc-8004.1056.1 | | 2-isopropylmalate synthase (EC 2.3.3.13) | 0.86 | 11 |
| Cupriavidus basilensis FW507-4G11 | 0.55 | RR42_RS14390 | | 3-isopropylmalate dehydratase | 0.43 | RR42_RS05465 | | 2-isopropylmalate synthase | 0.35 | 109 |
| Castellaniella sp019104865 MT123 | 0.54 | ABCV34_RS04285 | | 3-isopropylmalate dehydratase small subunit | 0.11 | ABCV34_RS12420 | | 2-isopropylmalate synthase | 0.69 | 2 |
| Dickeya dianthicola ME23 | 0.53 | DZA65_RS19215 | | 3-isopropylmalate dehydratase small subunit | 0.39 | DZA65_RS19200 | | 2-isopropylmalate synthase | 0.94 | 3 |
| Dickeya dadantii 3937 | 0.53 | DDA3937_RS18130 | | 3-isopropylmalate dehydratase small subunit | 0.39 | DDA3937_RS18115 | | 2-isopropylmalate synthase | 0.94 | 3 |
| Serratia liquefaciens MT49 | 0.53 | IAI46_03340 | | 3-isopropylmalate dehydratase small subunit | 0.40 | IAI46_03355 | | 2-isopropylmalate synthase | low | > 86 |
| Dickeya dianthicola 67-19 | 0.53 | HGI48_RS18070 | | 3-isopropylmalate dehydratase small subunit | 0.39 | HGI48_RS18055 | | 2-isopropylmalate synthase | 0.88 | 1 |
| Vibrio cholerae E7946 ATCC 55056 | 0.52 | CSW01_12610 | | 3-isopropylmalate dehydratase small subunit | 0.37 | CSW01_12595 | | 2-isopropylmalate synthase | 0.67 | 42 |
| Pantoea sp. MT58 | 0.52 | IAI47_16015 | | 3-isopropylmalate dehydratase small subunit | 0.39 | IAI47_16000 | | 2-isopropylmalate synthase | 0.97 | 6 |
| Pectobacterium carotovorum WPP14 | 0.51 | HER17_RS03070 | | 3-isopropylmalate dehydratase small subunit | 0.40 | HER17_RS03085 | | 2-isopropylmalate synthase | 0.98 | 3 |
| Shewanella loihica PV-4 | 0.51 | Shew_3469 | | isopropylmalate isomerase small subunit (RefSeq) | 0.37 | Shew_3472 | | 2-isopropylmalate synthase (RefSeq) | 0.98 | 5 |
| Klebsiella michiganensis M5al | 0.51 | BWI76_RS04665 | | 3-isopropylmalate dehydratase small subunit | 0.39 | BWI76_RS04680 | | 2-isopropylmalate synthase | 0.98 | 1 |
| Shewanella oneidensis MR-1 | 0.51 | SO4233 | leuD | 3-isopropylmalate dehydratase, small subunit (NCBI ptt file) | 0.36 | SO4236 | leuA | 2-isopropylmalate synthase (NCBI ptt file) | 0.99 | 1 |
| Escherichia coli ECRC62 | 0.50 | BNILDI_08535 | leuD | 3-isopropylmalate dehydratase small subunit | 0.38 | BNILDI_08550 | | 2-isopropylmalate synthase | — | — |
| Escherichia coli BL21 | 0.50 | ECD_00073 | | 3-isopropylmalate dehydratase small subunit | 0.38 | ECD_00076 | | 2-isopropylmalate synthase | 0.52 | 1 |
| Erwinia tracheiphila SCR3 | 0.50 | LU632_RS02865 | leuD | 3-isopropylmalate dehydratase small subunit | 0.39 | LU632_RS02880 | leuA | 2-isopropylmalate synthase | 0.93 | 3 |
| Shewanella sp. ANA-3 | 0.50 | Shewana3_3758 | leuD | isopropylmalate isomerase small subunit (RefSeq) | 0.36 | Shewana3_3761 | | 2-isopropylmalate synthase (RefSeq) | 0.98 | 2 |
| Enterobacter asburiae PDN3 | 0.50 | EX28DRAFT_3667 | | 3-isopropylmalate dehydratase, small subunit | 0.38 | EX28DRAFT_3670 | | 2-isopropylmalate synthase (EC 2.3.3.13) | 0.84 | 8 |
| Escherichia coli BW25113 | 0.50 | b0071 | leuD | isopropylmalate isomerase small subunit (NCBI) | 0.38 | b0074 | leuA | 2-isopropylmalate synthase (NCBI) | 0.98 | 3 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.50 | OHPLBJKB_03586 | | 3-isopropylmalate dehydratase small subunit | 0.38 | OHPLBJKB_03583 | | 2-isopropylmalate synthase | low | > 73 |
| Escherichia coli ECOR27 | 0.50 | NOLOHH_03075 | leuD | 3-isopropylmalate dehydratase small subunit | 0.38 | NOLOHH_03060 | | 2-isopropylmalate synthase | low | > 57 |
| Shewanella amazonensis SB2B | 0.50 | Sama_0338 | leuD | isopropylmalate isomerase small subunit (RefSeq) | 0.37 | Sama_0335 | | 2-isopropylmalate synthase (RefSeq) | 0.97 | 7 |
| Escherichia coli ECRC98 | 0.50 | JDDGAC_14325 | leuD | 3-isopropylmalate dehydratase small subunit | 0.38 | JDDGAC_14310 | | 2-isopropylmalate synthase | — | — |
| Escherichia coli ECRC99 | 0.50 | KEDOAH_17425 | leuD | 3-isopropylmalate dehydratase small subunit | 0.38 | KEDOAH_17440 | | 2-isopropylmalate synthase | — | — |
| Escherichia coli ECRC101 | 0.50 | MCAODC_01245 | leuD | 3-isopropylmalate dehydratase small subunit | 0.38 | MCAODC_01230 | | 2-isopropylmalate synthase | — | — |
| Escherichia coli ECRC102 | 0.50 | NIAGMN_08580 | leuD | 3-isopropylmalate dehydratase small subunit | 0.38 | NIAGMN_08565 | | 2-isopropylmalate synthase | — | — |
| Escherichia coli Nissle 1917 | 0.50 | ECOLIN_RS00385 | | 3-isopropylmalate dehydratase small subunit | 0.38 | ECOLIN_RS00400 | | 2-isopropylmalate synthase | low | > 52 |
| Escherichia coli ECRC101 | 0.50 | OKFHMN_10730 | leuD | 3-isopropylmalate dehydratase small subunit | 0.38 | OKFHMN_10715 | | 2-isopropylmalate synthase | — | — |
| Escherichia fergusonii Becca | 0.50 | EFB2_03974 | | 3-isopropylmalate dehydratase small subunit | 0.38 | EFB2_03971 | | 2-isopropylmalate synthase | low | > 86 |
| Escherichia coli ECOR38 | 0.50 | HEPCGN_08710 | leuD | 3-isopropylmalate dehydratase small subunit | 0.38 | HEPCGN_08695 | | 2-isopropylmalate synthase | low | > 85 |
| Rahnella sp. WP5 | 0.50 | EX31_RS03695 | | 3-isopropylmalate dehydratase small subunit | 0.39 | EX31_RS03680 | | 2-isopropylmalate synthase | 0.94 | 38 |
| Enterobacter sp. TBS_079 | 0.49 | MPMX20_00766 | | 3-isopropylmalate dehydratase small subunit 1 | 0.38 | MPMX20_00769 | | 2-isopropylmalate synthase | 0.96 | 3 |
| Alteromonas macleodii MIT1002 | 0.46 | MIT1002_00946 | | 3-isopropylmalate dehydratase small subunit 1 | 0.40 | MIT1002_00949 | | 2-isopropylmalate synthase | 0.97 | 9 |
| Sphingomonas koreensis DSMZ 15582 | 0.46 | Ga0059261_4225 | | 3-isopropylmalate dehydratase, small subunit | 0.12 | Ga0059261_4031 | | 2-isopropylmalate synthase, yeast type | 0.98 | 1 |
| Dyella japonica UNC79MFTsu3.2 | 0.43 | ABZR86_RS15955 | | 3-isopropylmalate dehydratase small subunit | 0.42 | ABZR86_RS15970 | | 2-isopropylmalate synthase | 0.94 | 13 |
| Bacteroides stercoris CC31F | 0.43 | HMPREF1181_RS14140 | | 3-isopropylmalate dehydratase small subunit | 0.38 | HMPREF1181_RS14150 | | 2-isopropylmalate synthase | 0.94 | 3 |
| Rhodanobacter denitrificans MT42 | 0.43 | LRK55_RS09970 | | 3-isopropylmalate dehydratase small subunit | 0.40 | LRK55_RS09985 | | 2-isopropylmalate synthase | low | > 63 |
| Rhodanobacter sp. FW510-T8 | 0.42 | OKGIIK_13590 | leuD | 3-isopropylmalate dehydratase small subunit | 0.40 | OKGIIK_13575 | leuA | 2-isopropylmalate synthase | low | > 52 |
| Rhodanobacter denitrificans FW104-10B01 | 0.42 | LRK54_RS10330 | | 3-isopropylmalate dehydratase small subunit | 0.40 | LRK54_RS10345 | | 2-isopropylmalate synthase | 0.72 | 9 |
| Parabacteroides merdae CL09T00C40 | 0.42 | HMPREF1078_RS16655 | | 3-isopropylmalate dehydratase small subunit | 0.40 | HMPREF1078_RS16665 | | 2-isopropylmalate synthase | 0.88 | 9 |
| Bifidobacterium breve UCC2003 | 0.40 | BBR_RS19625 | | 3-isopropylmalate dehydratase small subunit | 0.12 | BBR_RS11170 | | 2-isopropylmalate synthase | low | > 34 |
| Lysobacter sp. OAE881 | 0.40 | ABIE51_RS17580 | | 3-isopropylmalate dehydratase small subunit | 0.41 | ABIE51_RS17570 | | 2-isopropylmalate synthase | 0.84 | 52 |
| Phocaeicola vulgatus CL09T03C04 | 0.40 | HMPREF1058_RS14555 | | 3-isopropylmalate dehydratase small subunit | 0.39 | HMPREF1058_RS14545 | | 2-isopropylmalate synthase | 0.75 | 31 |
| Phocaeicola dorei CL03T12C01 | 0.39 | ABI39_RS10205 | | 3-isopropylmalate dehydratase small subunit | 0.38 | ABI39_RS10195 | | 2-isopropylmalate synthase | 0.83 | 10 |
| Bacteroides ovatus ATCC 8483 | 0.39 | BACOVA_04602 | | 3-isopropylmalate dehydratase, small subunit | 0.38 | BACOVA_04604 | | 2-isopropylmalate synthase | 0.95 | 11 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.39 | BT1859 | | 3-isopropylmalate dehydratase small subunit (NCBI ptt file) | 0.38 | BT1861 | | 2-isopropylmalate synthase (EC 2.3.3.13) (from data) | 0.83 | 23 |
Not shown: 15 genomes with orthologs for Dshi_0083 only; 5 genomes with orthologs for Dshi_0596 only