| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Bacteroides thetaiotaomicron VPI-5482 | 1.0 | BT1361 | | DNA repair protein recN (Recombination protein N) (NCBI ptt file) | 1.0 | BT3266 | | excinuclease ABC subunit C (NCBI ptt file) | 0.49 | 17 |
| Bacteroides ovatus ATCC 8483 | 0.86 | BACOVA_00200 | | DNA repair protein RecN | 0.95 | BACOVA_01365 | | excinuclease ABC, C subunit | low | > 94 |
| Bacteroides stercoris CC31F | 0.77 | HMPREF1181_RS10900 | | DNA repair protein RecN | 0.86 | HMPREF1181_RS02095 | | excinuclease ABC subunit UvrC | low | > 56 |
| Phocaeicola dorei CL03T12C01 | 0.71 | ABI39_RS14500 | | DNA repair protein RecN | 0.82 | ABI39_RS05415 | | excinuclease ABC subunit UvrC | low | > 72 |
| Phocaeicola vulgatus CL09T03C04 | 0.71 | HMPREF1058_RS18225 | | DNA repair protein RecN | 0.82 | HMPREF1058_RS11525 | | excinuclease ABC subunit UvrC | 0.81 | 1 |
| Parabacteroides merdae CL09T00C40 | 0.54 | HMPREF1078_RS02000 | | DNA repair protein RecN | 0.73 | HMPREF1078_RS06310 | | excinuclease ABC subunit UvrC | low | > 61 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.39 | ABZR88_RS06580 | | DNA repair protein RecN | 0.47 | ABZR88_RS04150 | | excinuclease ABC subunit UvrC | low | > 71 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.39 | CA264_13235 | | DNA repair protein RecN | 0.43 | CA264_16350 | | excinuclease ABC subunit C | 0.54 | 20 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.37 | Echvi_2067 | | DNA repair protein RecN | 0.43 | Echvi_0619 | | excinuclease ABC, C subunit | 0.74 | 5 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.35 | CA265_RS14855 | | DNA repair protein RecN | 0.46 | CA265_RS18110 | | excinuclease ABC subunit C | 0.83 | 2 |
| Pseudomonas sp. S08-1 | 0.31 | OH686_17050 | | DNA repair protein RecN | 0.24 | OH686_00340 | | excinuclease ABC subunit C | low | > 80 |
| Pseudomonas fluorescens GW456-L13 | 0.29 | PfGW456L13_5106 | | DNA repair protein RecN | 0.25 | PfGW456L13_2886 | | Excinuclease ABC subunit C | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.29 | Pf1N1B4_1178 | | DNA repair protein RecN | 0.25 | Pf1N1B4_5618 | | Excinuclease ABC subunit C | 0.42 | 4 |
| Pseudomonas fluorescens FW300-N2E2 | 0.29 | Pf6N2E2_3370 | | DNA repair protein RecN | 0.24 | Pf6N2E2_2021 | | Excinuclease ABC subunit C | 0.69 | 4 |
| Pseudomonas syringae pv. syringae B728a | 0.28 | Psyr_4197 | | DNA replication and repair protein RecN | 0.26 | Psyr_2896 | | Excinuclease ABC subunit C | 0.42 | 9 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.28 | Psyr_4197 | | DNA replication and repair protein RecN | 0.26 | Psyr_2896 | | Excinuclease ABC subunit C | 0.38 | 62 |
| Pseudomonas sp. RS175 | 0.28 | PFR28_00071 | | DNA repair protein RecN | 0.24 | PFR28_01411 | | UvrABC system protein C | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.28 | AO353_05660 | | DNA repair protein RecN | 0.25 | AO353_21835 | | excinuclease ABC subunit C | 0.62 | 4 |
| Pseudomonas simiae WCS417 | 0.28 | PS417_24070 | | recombination and repair protein | 0.25 | PS417_10725 | | excinuclease ABC subunit C | 0.43 | 9 |
| Pseudomonas fluorescens SBW25-INTG | 0.28 | PFLU_RS25910 | | DNA repair protein RecN | 0.25 | PFLU_RS10770 | | excinuclease ABC subunit UvrC | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.28 | PFLU_RS25910 | | DNA repair protein RecN | 0.25 | PFLU_RS10770 | | excinuclease ABC subunit UvrC | 0.55 | 6 |
| Shewanella amazonensis SB2B | 0.27 | Sama_1026 | | recombination and repair protein (RefSeq) | 0.25 | Sama_1608 | uvrC | excinuclease ABC subunit C (RefSeq) | 0.67 | 8 |
| Shewanella oneidensis MR-1 | 0.27 | SO3462 | recN | DNA repair protein RecN (NCBI ptt file) | 0.26 | SO1861 | uvrC | excinuclease ABC, C subunit (NCBI ptt file) | 0.51 | 8 |
| Marinobacter adhaerens HP15 | 0.27 | HP15_3084 | | DNA repair protein RecN | 0.25 | HP15_1568 | | excinuclease ABC subunit C | 0.86 | 7 |
| Pseudomonas fluorescens FW300-N2C3 | 0.27 | AO356_07510 | | DNA repair protein RecN | 0.25 | AO356_00350 | | excinuclease ABC subunit C | 0.81 | 3 |
| Shewanella sp. ANA-3 | 0.27 | Shewana3_1104 | | recombination and repair protein (RefSeq) | 0.26 | Shewana3_1609 | uvrC | excinuclease ABC subunit C (RefSeq) | low | > 73 |
| Pseudomonas putida KT2440 | 0.27 | PP_4729 | | factor used in recombination and DNA repair | 0.26 | PP_4098 | | UvrABC system protein C | low | > 96 |
| Pseudomonas stutzeri RCH2 | 0.27 | Psest_0962 | | DNA repair protein RecN | 0.26 | Psest_2259 | | excinuclease ABC, C subunit | 0.73 | 4 |
| Shewanella loihica PV-4 | 0.27 | Shew_1196 | | recombination and repair protein (RefSeq) | 0.25 | Shew_1825 | uvrC | excinuclease ABC subunit C (RefSeq) | 0.62 | 7 |
| Ralstonia sp. UNC404CL21Col | 0.26 | ABZR87_RS01065 | | DNA repair protein RecN | 0.25 | ABZR87_RS10245 | | excinuclease ABC subunit UvrC | low | > 80 |
| Vibrio cholerae E7946 ATCC 55056 | 0.26 | CSW01_04395 | | DNA repair protein RecN | 0.26 | CSW01_06140 | | excinuclease ABC subunit C | 0.38 | 45 |
| Rahnella sp. WP5 | 0.26 | EX31_RS21760 | | DNA repair protein RecN | 0.25 | EX31_RS24150 | | excinuclease ABC subunit UvrC | low | > 89 |
| Pantoea sp. MT58 | 0.26 | IAI47_04810 | | DNA repair protein RecN | 0.26 | IAI47_12465 | | excinuclease ABC subunit UvrC | low | > 76 |
| Fusobacterium nucleatum SB010 | 0.25 | HUW76_08055 | | DNA repair protein RecN | 0.26 | HUW76_06695 | | excinuclease ABC subunit UvrC | low | > 35 |
| Escherichia coli Nissle 1917 | 0.25 | ECOLIN_RS14775 | | DNA repair protein RecN | 0.25 | ECOLIN_RS10895 | | excinuclease ABC subunit UvrC | low | > 52 |
| Escherichia coli BW25113 | 0.25 | b2616 | recN | recombination and repair protein (NCBI) | 0.25 | b1913 | uvrC | excinuclease ABC, subunit C; repair of UV damage to DNA (VIMSS) | 0.40 | 19 |
| Escherichia coli ECOR27 | 0.25 | NOLOHH_12815 | recN | DNA repair protein RecN | 0.25 | NOLOHH_16445 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Escherichia coli ECRC62 | 0.25 | BNILDI_11620 | recN | DNA repair protein RecN | 0.25 | BNILDI_15235 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Escherichia coli ECOR38 | 0.25 | HEPCGN_20265 | recN | DNA repair protein RecN | 0.25 | HEPCGN_04180 | uvrC | excinuclease ABC subunit UvrC | low | > 85 |
| Escherichia coli BL21 | 0.25 | ECD_02504 | | recombination and repair protein | 0.25 | ECD_01878 | | excinuclease UvrABC, endonuclease subunit | low | > 60 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.25 | OHPLBJKB_01091 | | DNA repair protein RecN | 0.25 | OHPLBJKB_01816 | | UvrABC system protein C | low | > 73 |
| Escherichia coli ECRC99 | 0.25 | KEDOAH_07075 | recN | DNA repair protein RecN | 0.25 | KEDOAH_02265 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Escherichia coli ECRC102 | 0.25 | NIAGMN_18915 | recN | DNA repair protein RecN | 0.25 | NIAGMN_02225 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Dickeya dadantii 3937 | 0.25 | DDA3937_RS04325 | | DNA repair protein RecN | 0.25 | DDA3937_RS13700 | | excinuclease ABC subunit UvrC | low | > 74 |
| Escherichia fergusonii Becca | 0.25 | EFB2_01277 | | DNA repair protein RecN | 0.25 | EFB2_02033 | | UvrABC system protein C | low | > 86 |
| Escherichia coli ECRC101 | 0.25 | OKFHMN_21145 | recN | DNA repair protein RecN | 0.25 | OKFHMN_25825 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Escherichia coli ECRC101 | 0.25 | MCAODC_11670 | recN | DNA repair protein RecN | 0.25 | MCAODC_19565 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Escherichia coli ECRC98 | 0.25 | JDDGAC_24810 | recN | DNA repair protein RecN | 0.25 | JDDGAC_00415 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Serratia liquefaciens MT49 | 0.25 | IAI46_19635 | | DNA repair protein RecN | 0.25 | IAI46_09210 | | excinuclease ABC subunit UvrC | 0.55 | 4 |
| Pectobacterium carotovorum WPP14 | 0.25 | HER17_RS17420 | | DNA repair protein RecN | 0.25 | HER17_RS07715 | | excinuclease ABC subunit UvrC | low | > 75 |
| Enterobacter sp. TBS_079 | 0.25 | MPMX20_03486 | | DNA repair protein RecN | 0.25 | MPMX20_02838 | | UvrABC system protein C | low | > 85 |
| Dickeya dianthicola 67-19 | 0.25 | HGI48_RS04320 | | DNA repair protein RecN | 0.24 | HGI48_RS13795 | | excinuclease ABC subunit UvrC | low | > 71 |
| Klebsiella michiganensis M5al | 0.25 | BWI76_RS21560 | | DNA repair protein RecN | 0.26 | BWI76_RS18330 | | excinuclease ABC subunit C | low | > 92 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.25 | GFF4162 | | DNA repair protein RecN | 0.25 | GFF1700 | | Excinuclease ABC subunit C | low | > 78 |
| Magnetospirillum magneticum AMB-1 | 0.25 | AMB_RS19520 | | DNA repair protein RecN | 0.24 | AMB_RS19240 | | UvrABC system protein C | — | — |
| Dickeya dianthicola ME23 | 0.24 | DZA65_RS04235 | | DNA repair protein RecN | 0.24 | DZA65_RS14285 | | excinuclease ABC subunit UvrC | low | > 75 |
| Dyella japonica UNC79MFTsu3.2 | 0.24 | ABZR86_RS05665 | | DNA repair protein RecN | 0.23 | ABZR86_RS02245 | | excinuclease ABC subunit UvrC | 0.85 | 4 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.24 | Xcc-8004.3431.1 | | DNA repair protein RecN | 0.24 | Xcc-8004.2477.1 | | Excinuclease ABC subunit C | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.24 | OKGIIK_07340 | recN | DNA repair protein RecN | 0.24 | OKGIIK_06930 | uvrC | excinuclease ABC subunit UvrC | low | > 52 |
| Castellaniella sp019104865 MT123 | 0.24 | ABCV34_RS07470 | | DNA repair protein RecN | 0.23 | ABCV34_RS06980 | | excinuclease ABC subunit UvrC | low | > 48 |
| Herbaspirillum seropedicae SmR1 | 0.24 | HSERO_RS03060 | | DNA repair protein | 0.25 | HSERO_RS09690 | | excinuclease ABC subunit C | low | > 78 |
| Enterobacter asburiae PDN3 | 0.24 | EX28DRAFT_2719 | | DNA repair protein RecN | 0.25 | EX28DRAFT_0634 | | Excinuclease ABC subunit C | low | > 76 |
| Kangiella aquimarina DSM 16071 | 0.24 | B158DRAFT_0601 | | DNA replication and repair protein RecN | 0.28 | B158DRAFT_1273 | | Excinuclease ABC subunit C | 0.64 | 10 |
| Alteromonas macleodii MIT1002 | 0.23 | MIT1002_01443 | | Recombination protein N | 0.26 | MIT1002_02153 | | Excinuclease ABC subunit C | low | > 70 |
| Sinorhizobium meliloti 1021 | 0.23 | SMc01877 | | DNA repair protein | 0.23 | SMc00602 | | excinuclease ABC subunit C | 0.62 | 8 |
| Agrobacterium fabrum C58 | 0.23 | Atu2083 | | DNA repair protein RecN | 0.23 | Atu1129 | | excinuclease ABC chain C | 0.32 | 28 |
| Synechococcus elongatus PCC 7942 | 0.23 | Synpcc7942_1779 | recN | DNA repair protein RecN | 0.22 | Synpcc7942_1945 | uvrC | excinuclease ABC subunit C | 0.74 | 3 |
| Rhodanobacter denitrificans MT42 | 0.23 | LRK55_RS17815 | | DNA repair protein RecN | 0.24 | LRK55_RS00120 | | excinuclease ABC subunit UvrC | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.23 | LRK54_RS17960 | | DNA repair protein RecN | 0.25 | LRK54_RS00380 | | excinuclease ABC subunit UvrC | low | > 59 |
| Erwinia tracheiphila SCR3 | 0.23 | LU632_RS16985 | recN | DNA repair protein RecN | 0.25 | LU632_RS10195 | uvrC | excinuclease ABC subunit UvrC | low | > 74 |
| Dechlorosoma suillum PS | 0.22 | Dsui_3072 | | DNA repair protein RecN | 0.25 | Dsui_2470 | | excinuclease ABC, C subunit | 0.83 | 10 |
| Lysobacter sp. OAE881 | 0.22 | ABIE51_RS11655 | | DNA repair protein RecN | 0.25 | ABIE51_RS12455 | | excinuclease ABC subunit UvrC | 0.68 | 6 |
| Variovorax sp. SCN45 | 0.22 | GFF2357 | | DNA repair protein RecN | 0.24 | GFF2859 | | Excinuclease ABC subunit C | low | > 127 |
| Sphingomonas koreensis DSMZ 15582 | 0.22 | Ga0059261_1026 | | DNA repair protein RecN | 0.23 | Ga0059261_3186 | | Excinuclease ABC subunit C | 0.43 | 6 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.22 | GFF829 | | DNA repair protein RecN | 0.24 | GFF3847 | | Excinuclease ABC subunit C | — | — |
| Azospirillum sp. SherDot2 | 0.22 | MPMX19_01601 | | DNA repair protein RecN | 0.24 | MPMX19_01070 | | UvrABC system protein C | low | > 112 |
| Rhodospirillum rubrum S1H | 0.21 | Rru_A0940 | | DNA repair protein RecN (NCBI) | 0.26 | Rru_A2220 | | Excinuclease ABC, C subunit (NCBI) | — | — |
| Phaeobacter inhibens DSM 17395 | 0.21 | PGA1_c09720 | | DNA repair protein RecN | 0.25 | PGA1_c02880 | | uvrABC system protein C | 0.56 | 3 |
| Azospirillum brasilense Sp245 | 0.21 | AZOBR_RS12395 | | DNA repair protein RecN | 0.25 | AZOBR_RS08965 | | excinuclease ABC subunit C | — | — |
| Rhodopseudomonas palustris CGA009 | 0.20 | TX73_018240 | | DNA repair protein RecN | 0.23 | TX73_006010 | | excinuclease ABC subunit UvrC | low | > 86 |
| Caulobacter crescentus NA1000 Δfur | 0.20 | CCNA_02062 | | DNA repair protein recN | 0.23 | CCNA_02975 | | excinuclease ABC subunit C | low | > 67 |
| Caulobacter crescentus NA1000 | 0.20 | CCNA_02062 | | DNA repair protein recN | 0.23 | CCNA_02975 | | excinuclease ABC subunit C | 0.84 | 4 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.19 | A4249_RS02620 | | DNA repair protein RecN | 0.23 | A4249_RS01670 | | excinuclease ABC subunit UvrC | low | > 48 |
| Acinetobacter radioresistens SK82 | 0.19 | MPMX26_00239 | | DNA repair protein RecN | 0.25 | MPMX26_00228 | | UvrABC system protein C | 0.61 | 1 |
| Dinoroseobacter shibae DFL-12 | 0.18 | Dshi_2413 | | DNA repair protein RecN (RefSeq) | 0.25 | Dshi_0644 | | excinuclease ABC, C subunit (RefSeq) | 0.51 | 4 |
| Mycobacterium tuberculosis H37Rv | 0.17 | Rv1696 | | Probable DNA repair protein RecN (recombination protein N) | 0.26 | Rv1420 | | Probable excinuclease ABC (subunit C-nuclease) UvrC | low | > 58 |
Not shown: 14 genomes with orthologs for BT1361 only; 4 genomes with orthologs for BT3266 only