Conservation of cofitness between Rru_A0556 and Rru_A2161 in Rhodospirillum rubrum S1H

86 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodospirillum rubrum S1H 1.0 Rru_A0556 Formyltetrahydrofolate deformylase (NCBI) 1.0 Rru_A2161 Polyphosphate kinase (NCBI) 0.69 2
Magnetospirillum magneticum AMB-1 0.59 AMB_RS18080 formyltetrahydrofolate deformylase 0.63 AMB_RS14295 RNA degradosome polyphosphate kinase low > 64
Azospirillum sp. SherDot2 0.58 MPMX19_04425 Formyltetrahydrofolate deformylase 0.60 MPMX19_01149 Polyphosphate kinase — —
Azospirillum brasilense Sp245 0.58 AZOBR_RS21685 formyltetrahydrofolate deformylase 0.60 AZOBR_RS16235 polyphosphate kinase — —
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS01805 formyltetrahydrofolate deformylase 0.33 QEN71_RS04860 polyphosphate kinase 1 low > 153
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_01917 formyltetrahydrofolate deformylase 0.33 H281DRAFT_04418 polyphosphate kinase — —
Paraburkholderia graminis OAS925 0.56 ABIE53_000728 formyltetrahydrofolate deformylase 0.33 ABIE53_002988 polyphosphate kinase low > 113
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS02955 formyltetrahydrofolate deformylase 0.33 BPHYT_RS14110 polyphosphate kinase low > 109
Sphingomonas koreensis DSMZ 15582 0.55 Ga0059261_1821 formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.51 Ga0059261_0225 polyphosphate kinase 1 low > 68
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS13800 formyltetrahydrofolate deformylase 0.33 RR42_RS13435 polyphosphate kinase low > 128
Ralstonia solanacearum GMI1000 0.53 RS_RS09460 formyltetrahydrofolate deformylase 0.31 RS_RS07705 polyphosphate kinase 1 low > 80
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS14235 formyltetrahydrofolate deformylase 0.32 ABZR87_RS14065 polyphosphate kinase 1 low > 80
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS02305 formyltetrahydrofolate deformylase 0.31 RALBFv3_RS02115 polyphosphate kinase 1 low > 76
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS11395 formyltetrahydrofolate deformylase 0.35 PFLU_RS29095 polyphosphate kinase 1 low > 109
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_30095 formyltetrahydrofolate deformylase 0.34 AO356_12895 polyphosphate kinase low > 104
Ralstonia solanacearum UW163 0.53 UW163_RS11420 formyltetrahydrofolate deformylase 0.31 UW163_RS15425 polyphosphate kinase 1 — —
Pseudomonas fluorescens SBW25 0.53 PFLU_RS11395 formyltetrahydrofolate deformylase 0.35 PFLU_RS29095 polyphosphate kinase 1 low > 109
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS07970 formyltetrahydrofolate deformylase 0.34 HSERO_RS06305 polyphosphate kinase low > 78
Ralstonia solanacearum PSI07 0.52 RPSI07_RS15065 formyltetrahydrofolate deformylase 0.31 RPSI07_RS15330 polyphosphate kinase 1 low > 81
Variovorax sp. SCN45 0.52 GFF3790 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.30 GFF1089 Polyphosphate kinase (EC 2.7.4.1) low > 127
Variovorax sp. OAS795 0.52 ABID97_RS00100 formyltetrahydrofolate deformylase 0.30 ABID97_RS14575 polyphosphate kinase 1 — —
Castellaniella sp019104865 MT123 0.52 ABCV34_RS00645 formyltetrahydrofolate deformylase 0.31 ABCV34_RS15580 polyphosphate kinase 1 low > 48
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.395.1 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.31 Xcc-8004.4064.1 Polyphosphate kinase (EC 2.7.4.1) 0.68 45
Dechlorosoma suillum PS 0.51 Dsui_0762 formyltetrahydrofolate deformylase 0.34 Dsui_2814 polyphosphate kinase 1 — —
Pseudomonas simiae WCS417 0.51 PS417_22565 formyltetrahydrofolate deformylase 0.35 PS417_27435 polyphosphate kinase low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.51 Psyr_2226 formyltetrahydrofolate deformylase 0.34 Psyr_0293 Polyphosphate kinase low > 86
Pseudomonas syringae pv. syringae B728a 0.51 Psyr_2226 formyltetrahydrofolate deformylase 0.34 Psyr_0293 Polyphosphate kinase low > 86
Acidovorax sp. GW101-3H11 0.51 Ac3H11_4485 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.30 Ac3H11_452 Polyphosphate kinase (EC 2.7.4.1) — —
Pseudomonas fluorescens FW300-N1B4 0.50 Pf1N1B4_665 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.35 Pf1N1B4_2208 Polyphosphate kinase (EC 2.7.4.1) — —
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_1825 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.34 PfGW456L13_874 Polyphosphate kinase (EC 2.7.4.1) — —
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_03710 formyltetrahydrofolate deformylase 0.35 AO353_08885 polyphosphate kinase low > 101
Pseudomonas sp. S08-1 0.50 OH686_18295 formyltetrahydrofolate deformylase 0.36 OH686_13995 polyphosphate kinase 1 low > 80
Pseudomonas sp. RS175 0.50 PFR28_03439 Formyltetrahydrofolate deformylase 0.34 PFR28_04345 Polyphosphate kinase — —
Pseudomonas putida KT2440 0.49 PP_1367 formyltetrahydrofolate hydrolase 0.35 PP_5217 Polyphosphate kinase low > 96
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_5508 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.35 Pf6N2E2_4453 Polyphosphate kinase (EC 2.7.4.1) low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF2737 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.29 GFF4226 Polyphosphate kinase (EC 2.7.4.1) low > 90
Pseudomonas stutzeri RCH2 0.49 Psest_3178 formyltetrahydrofolate deformylase 0.36 Psest_3732 polyphosphate kinase 1 low > 67
Sinorhizobium meliloti 1021 0.49 SMc03205 formyltetrahydrofolate deformylase 0.54 SMc00618 polyphosphate kinase — —
Caulobacter crescentus NA1000 0.49 CCNA_03745 formyltetrahydrofolate deformylase 0.57 CCNA_01782 polyphosphate kinase 1 0.72 66
Caulobacter crescentus NA1000 Δfur 0.49 CCNA_03745 formyltetrahydrofolate deformylase 0.57 CCNA_01782 polyphosphate kinase 1 low > 67
Rhizobium sp. OAE497 0.49 ABIE40_RS00960 formyltetrahydrofolate deformylase 0.54 ABIE40_RS06575 RNA degradosome polyphosphate kinase low > 107
Rhodopseudomonas palustris CGA009 0.48 TX73_020890 formyltetrahydrofolate deformylase 0.56 TX73_015770 RNA degradosome polyphosphate kinase low > 86
Agrobacterium fabrum C58 0.48 Atu2464 formyltetrahydrofolate deformylase 0.55 Atu1144 polyphosphate kinase — —
Dinoroseobacter shibae DFL-12 0.48 Dshi_2111 formyltetrahydrofolate deformylase (RefSeq) 0.53 Dshi_0740 Polyphosphate kinase (RefSeq) low > 64
Bosea sp. OAE506 0.47 ABIE41_RS02615 formyltetrahydrofolate deformylase 0.56 ABIE41_RS16125 RNA degradosome polyphosphate kinase low > 77
Lysobacter sp. OAE881 0.47 ABIE51_RS07700 formyltetrahydrofolate deformylase 0.31 ABIE51_RS14230 polyphosphate kinase 1 low > 62
Alteromonas macleodii MIT1002 0.47 MIT1002_00404 Formyltetrahydrofolate deformylase 0.23 MIT1002_00872 Polyphosphate kinase low > 70
Echinicola vietnamensis KMM 6221, DSM 17526 0.45 Echvi_1543 formyltetrahydrofolate deformylase 0.27 Echvi_2996 polyphosphate kinase 1 low > 79
Phocaeicola vulgatus CL09T03C04 0.43 HMPREF1058_RS06160 formyltetrahydrofolate deformylase 0.23 HMPREF1058_RS02340 RNA degradosome polyphosphate kinase low > 67
Phocaeicola dorei CL03T12C01 0.43 ABI39_RS19915 formyltetrahydrofolate deformylase 0.23 ABI39_RS14955 RNA degradosome polyphosphate kinase low > 72
Bacteroides thetaiotaomicron VPI-5482 0.42 BT1381 formyltetrahydrofolate deformylase (NCBI ptt file) 0.23 BT0541 Polyphosphate kinase (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.42 BACOVA_00222 formyltetrahydrofolate deformylase 0.22 BACOVA_01446 polyphosphate kinase 1 low > 94
Synechococcus elongatus PCC 7942 0.41 Synpcc7942_1008 purU formyltetrahydrofolate deformylase 0.37 Synpcc7942_1566 ppk polyphosphate kinase low > 38
Bacteroides stercoris CC31F 0.41 HMPREF1181_RS11085 formyltetrahydrofolate deformylase 0.24 HMPREF1181_RS08035 RNA degradosome polyphosphate kinase low > 56
Acinetobacter radioresistens SK82 0.38 MPMX26_00378 Formyltetrahydrofolate deformylase 0.35 MPMX26_02335 Polyphosphate kinase low > 36
Mycobacterium tuberculosis H37Rv 0.38 Rv2964 Probable formyltetrahydrofolate deformylase PurU (formyl-FH(4) hydrolase) 0.35 Rv2984 Polyphosphate kinase PPK (polyphosphoric acid kinase) (ATP-polyphosphate phosphotransferase) — —
Dickeya dadantii 3937 0.38 DDA3937_RS10325 formyltetrahydrofolate deformylase 0.23 DDA3937_RS15150 polyphosphate kinase 1 low > 74
Dickeya dianthicola ME23 0.38 DZA65_RS10810 formyltetrahydrofolate deformylase 0.23 DZA65_RS16045 polyphosphate kinase 1 low > 75
Dickeya dianthicola 67-19 0.38 HGI48_RS10335 formyltetrahydrofolate deformylase 0.23 HGI48_RS15225 polyphosphate kinase 1 low > 71
Pectobacterium carotovorum WPP14 0.36 HER17_RS11065 formyltetrahydrofolate deformylase 0.24 HER17_RS06425 polyphosphate kinase 1 low > 75
Rahnella sp. WP5 0.36 EX31_RS10115 formyltetrahydrofolate deformylase 0.24 EX31_RS22680 polyphosphate kinase 1 low > 89
Enterobacter asburiae PDN3 0.36 EX28DRAFT_0858 formyltetrahydrofolate deformylase 0.24 EX28DRAFT_0166 polyphosphate kinase 1 low > 76
Serratia liquefaciens MT49 0.36 IAI46_14265 formyltetrahydrofolate deformylase 0.24 IAI46_18915 polyphosphate kinase 1 low > 86
Enterobacter sp. TBS_079 0.36 MPMX20_02596 Formyltetrahydrofolate deformylase 0.24 MPMX20_03356 Polyphosphate kinase low > 85
Erwinia tracheiphila SCR3 0.35 LU632_RS12940 purU formyltetrahydrofolate deformylase 0.23 LU632_RS08260 ppk1 polyphosphate kinase 1 low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF2756 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.23 GFF2167 Polyphosphate kinase (EC 2.7.4.1) low > 78
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_09940 formyltetrahydrofolate deformylase 0.24 CSW01_03780 polyphosphate kinase 1 low > 62
Escherichia coli ECRC98 0.35 JDDGAC_06005 purU formyltetrahydrofolate deformylase 0.24 JDDGAC_25745 ppk1 polyphosphate kinase 1 low > 86
Escherichia coli ECRC102 0.35 NIAGMN_27665 purU formyltetrahydrofolate deformylase 0.24 NIAGMN_19570 ppk1 polyphosphate kinase 1 — —
Escherichia coli ECRC101 0.35 MCAODC_21690 purU formyltetrahydrofolate deformylase 0.24 MCAODC_12330 ppk1 polyphosphate kinase 1 low > 87
Escherichia coli ECRC100 0.35 OKFHMN_28570 purU formyltetrahydrofolate deformylase 0.24 OKFHMN_21800 ppk1 polyphosphate kinase 1 low > 80
Escherichia coli ECRC99 0.35 KEDOAH_25565 purU formyltetrahydrofolate deformylase 0.24 KEDOAH_06420 ppk1 polyphosphate kinase 1 — —
Escherichia coli Nissle 1917 0.35 ECOLIN_RS07460 formyltetrahydrofolate deformylase 0.24 ECOLIN_RS14200 polyphosphate kinase 1 low > 55
Escherichia coli ECOR38 0.35 HEPCGN_25030 purU formyltetrahydrofolate deformylase 0.24 HEPCGN_20965 ppk1 polyphosphate kinase 1 low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_02453 Formyltetrahydrofolate deformylase 0.24 OHPLBJKB_01225 Polyphosphate kinase low > 73
Escherichia coli ECOR27 0.35 NOLOHH_20480 purU formyltetrahydrofolate deformylase 0.24 NOLOHH_13450 ppk1 polyphosphate kinase 1 low > 75
Escherichia fergusonii Becca 0.35 EFB2_02694 Formyltetrahydrofolate deformylase 0.24 EFB2_01397 Polyphosphate kinase low > 86
Escherichia coli BL21 0.35 ECD_01208 formyltetrahydrofolate hydrolase 0.24 ECD_02393 polyphosphate kinase, component of RNA degradosome low > 61
Pantoea sp. MT58 0.35 IAI47_09010 formyltetrahydrofolate deformylase 0.24 IAI47_05155 polyphosphate kinase 1 low > 76
Escherichia coli BW25113 0.35 b1232 purU formyltetrahydrofolate deformylase (NCBI) 0.24 b2501 ppk polyphosphate kinase (NCBI) low > 76
Escherichia coli ECRC62 0.35 BNILDI_18635 purU formyltetrahydrofolate deformylase 0.24 BNILDI_12260 ppk1 polyphosphate kinase 1 low > 75
Klebsiella michiganensis M5al 0.35 BWI76_RS17290 formyltetrahydrofolate deformylase 0.24 BWI76_RS20995 RNA degradosome polyphosphate kinase low > 92
Shewanella amazonensis SB2B 0.34 Sama_1134 purU formyltetrahydrofolate deformylase (RefSeq) 0.23 Sama_2011 polyphosphate kinase (RefSeq) low > 62
Shewanella sp. ANA-3 0.34 Shewana3_2821 purU formyltetrahydrofolate deformylase (RefSeq) 0.22 Shewana3_2417 polyphosphate kinase (RefSeq) low > 73
Mucilaginibacter yixingensis YX-36 DSM 26809 0.33 ABZR88_RS14140 formyltetrahydrofolate deformylase 0.26 ABZR88_RS04845 polyphosphate kinase 1 low > 71
Shewanella loihica PV-4 0.31 Shew_2640 purU formyltetrahydrofolate deformylase (RefSeq) 0.23 Shew_3079 polyphosphate kinase (RefSeq) low > 60
Pedobacter sp. GW460-11-11-14-LB5 0.31 CA265_RS21155 formyltetrahydrofolate deformylase 0.24 CA265_RS09830 polyphosphate kinase 1 low > 88

Not shown: 3 genomes with orthologs for Rru_A0556 only; 10 genomes with orthologs for Rru_A2161 only