Homologs of SMc00616 from Sinorhizobium meliloti 1021

permease
SEED: Putative permease often clustered with de novo purine synthesis

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sinorhizobium meliloti 1021 SMc00616 permease insig. 100 100
o Rhizobium sp. OAE497 ABIE40_RS06565 AI-2E family transporter insig. 68 100
o Agrobacterium fabrum C58 Atu1142 permease no data 73 97
o Bosea sp. OAE506 ABIE41_RS16140 AI-2E family transporter insig. 55 95
o Magnetospirillum magneticum AMB-1 AMB_RS14320 AI-2E family transporter no data 46 97
o Dinoroseobacter shibae DFL-12 Dshi_0742 protein of unknown function UPF0118 (RefSeq) no data 47 95
o Phaeobacter inhibens DSM 17395 PGA1_c21430 putative permease sig. 46 96
o Azospirillum sp. SherDot2 MPMX19_01301 AI-2 transport protein TqsA insig. 47 94
o Azospirillum brasilense Sp245 AZOBR_RS16275 membrane protein sig. 47 94
o Rhodospirillum rubrum S1H Rru_A2164 Protein of unknown function UPF0118 (NCBI) strong 46 98
o Rhodanobacter denitrificans MT42 LRK55_RS12655 AI-2E family transporter insig. 40 94
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS12955 AI-2E family transporter insig. 40 94
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS19880 AI-2E family transporter cofit 39 95
o Lysobacter sp. OAE881 ABIE51_RS15880 AI-2E family transporter strong 40 92
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1678.1 Putative permease often clustered with de novo purine synthesis insig. 40 95
o Rhodanobacter sp. FW510-T8 OKGIIK_02325 AI-2E family transporter insig. 40 92
o Pseudomonas sp. RS175 PFR28_03215 Sodium-lithium/proton antiporter insig. 39 95
o Pseudomonas simiae WCS417 PS417_20110 membrane protein insig. 41 92
o Pseudomonas syringae pv. syringae B728a Psyr_3687 Protein of unknown function UPF0118 insig. 39 95
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3687 Protein of unknown function UPF0118 insig. 39 95
o Pseudomonas fluorescens SBW25 PFLU_RS22055 AI-2E family transporter insig. 40 92
o Pseudomonas fluorescens SBW25-INTG PFLU_RS22055 AI-2E family transporter sig. 40 92
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3700 Putative permease often clustered with de novo purine synthesis insig. 41 93
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5731 Putative permease often clustered with de novo purine synthesis insig. 41 95
o Pseudomonas fluorescens FW300-N2C3 AO356_19105 hypothetical protein insig. 40 95
o Pseudomonas putida KT2440 PP_1667 putative Transporter insig. 40 89
o Pseudomonas fluorescens FW300-N2E3 AO353_02670 hypothetical protein insig. 41 92
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4250 Putative permease often clustered with de novo purine synthesis insig. 40 92
o Pseudomonas stutzeri RCH2 Psest_1476 Predicted permease sig. 39 92
o Dechlorosoma suillum PS Dsui_1518 putative permease insig. 36 95
o Acinetobacter radioresistens SK82 MPMX26_02205 hypothetical protein insig. 34 88
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS05285 AI-2E family transporter insig. 33 93
o Ralstonia solanacearum UW163 UW163_RS08340 AI-2E family transporter insig. 33 93
o Ralstonia sp. UNC404CL21Col ABZR87_RS00920 AI-2E family transporter strong 33 93
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04709 Predicted PurR-regulated permease PerM insig. 32 94
o Ralstonia solanacearum PSI07 RPSI07_RS12015 AI-2E family transporter cofit 34 87
o Paraburkholderia graminis OAS925 ABIE53_000873 putative PurR-regulated permease PerM sig. 34 94
o Pseudomonas sp. S08-1 OH686_19010 Putative permease often clustered with de novo purine synthesis insig. 38 95
o Burkholderia phytofirmans PsJN BPHYT_RS03635 ABC transporter permease insig. 35 94
o Paraburkholderia sabiae LMG 24235 QEN71_RS26450 AI-2E family transporter cofit 34 94
o Herbaspirillum seropedicae SmR1 HSERO_RS03160 ABC transporter permease insig. 33 94
o Ralstonia solanacearum GMI1000 RS_RS13150 AI-2E family transporter insig. 34 87
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3435 Putative permease often clustered with de novo purine synthesis insig. 37 91
o Klebsiella michiganensis M5al BWI76_RS20920 AI-2E family transporter insig. 31 88
o Enterobacter asburiae PDN3 EX28DRAFT_0179 Predicted permease insig. 31 88
o Enterobacter sp. TBS_079 MPMX20_03343 Putative transport protein YhhT insig. 31 88
o Escherichia coli BL21 ECD_02385 putative UPF0118 family inner membrane permease sig. 30 88
o Escherichia coli ECOR27 NOLOHH_13490 perM Putative permease PerM cofit 30 88
o Escherichia coli ECOR38 HEPCGN_21005 perM Putative permease PerM cofit 30 88
o Escherichia coli ECRC101 OKFHMN_21840 perM Putative permease PerM insig. 30 88
o Escherichia coli ECRC101 MCAODC_12370 perM Putative permease PerM insig. 30 88
o Escherichia coli ECRC102 NIAGMN_19610 perM Putative permease PerM insig. 30 88
o Escherichia coli ECRC62 BNILDI_12300 perM Putative permease PerM insig. 30 88
o Escherichia coli ECRC98 JDDGAC_25785 perM Putative permease PerM no data 30 88
o Escherichia coli ECRC99 KEDOAH_06380 perM Putative permease PerM no data 30 88
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01233 Putative transport protein YhhT insig. 30 88
o Escherichia coli BW25113 b2493 yfgO predicted inner membrane protein (NCBI) strong 30 88
o Escherichia coli Nissle 1917 ECOLIN_RS14160 AI-2E family transporter insig. 30 88
o Escherichia fergusonii Becca EFB2_01405 Putative transport protein YhhT insig. 30 88
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2176 Putative permease PerM (= YfgO) insig. 30 88
o Alteromonas macleodii MIT1002 MIT1002_02210 pheromone autoinducer 2 transporter sig. 28 86
o Kangiella aquimarina DSM 16071 B158DRAFT_2441 Predicted permease insig. 27 95
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS17355 AI-2E family transporter insig. 29 98
o Rahnella sp. WP5 EX31_RS22725 AI-2E family transporter insig. 27 88
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2750 Putative permease PerM (= YfgO) sig. 32 85
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3329 Putative permease PerM (= YfgO) sig. 31 85
  Pseudomonas stutzeri RCH2 Psest_1512 Predicted permease strong 28 85
o Serratia liquefaciens MT49 IAI46_18795 AI-2E family transporter insig. 26 88
o Vibrio cholerae E7946 ATCC 55056 CSW01_10775 AI-2E family transporter insig. 28 86
o Shewanella amazonensis SB2B Sama_1911 hypothetical protein (RefSeq) insig. 27 84
  Pseudomonas fluorescens FW300-N2C3 AO356_04545 permease sig. 32 85
o Marinobacter adhaerens HP15 HP15_2029 permease perM strong 27 86
o Shewanella loihica PV-4 Shew_1843 hypothetical protein (RefSeq) no data 27 85
o Phocaeicola dorei CL03T12C01 ABI39_RS09270 AI-2E family transporter insig. 23 94
  Pseudomonas putida KT2440 PP_1234 putative permease sig. 30 85
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_06045 AI-2E family transporter insig. 27 90
o Shewanella oneidensis MR-1 SO2867 permease PerM, putative (NCBI ptt file) insig. 26 80
o Bacteroides stercoris CC31F HMPREF1181_RS09580 AI-2E family transporter insig. 25 86
o Shewanella sp. ANA-3 Shewana3_1651 hypothetical protein (RefSeq) insig. 26 80
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13720 AI-2E family transporter sig. 24 95
  Pseudomonas syringae pv. syringae B728a Psyr_1545 Protein of unknown function UPF0118 insig. 30 84
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1545 Protein of unknown function UPF0118 cofit 30 84
o Bacteroides ovatus ATCC 8483 BACOVA_03070 hypothetical protein insig. 23 95
  Pseudomonas sp. RS175 PFR28_00696 hypothetical protein insig. 31 85
  Pseudomonas fluorescens FW300-N2E3 AO353_17655 permease insig. 32 85
  Pseudomonas fluorescens SBW25 PFLU_RS07260 AI-2E family transporter insig. 31 85
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07260 AI-2E family transporter insig. 31 85
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4510 Putative permease PerM (= YfgO) cofit 31 85
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS10445 AI-2E family transporter insig. 23 88
  Pseudomonas simiae WCS417 PS417_07150 permase sig. 31 85
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02210 AI-2E family transporter sig. 25 82
o Bacteroides thetaiotaomicron VPI-5482 BT2276 putative permease (NCBI ptt file) insig. 23 94
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2526 Predicted permease sig. 24 91
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02095 AI-2E family transporter insig. 25 86
o Mycobacterium tuberculosis H37Rv Rv0205 Probable conserved transmembrane protein insig. 26 97
o Synechococcus elongatus PCC 7942 Synpcc7942_1113 hypothetical protein insig. 25 85
o Fusobacterium nucleatum SB010 HUW76_03025 AI-2E family transporter strong 27 56
  Shewanella amazonensis SB2B Sama_1490 hypothetical protein (RefSeq) insig. 25 90
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07425 AI-2E family transporter strong 25 66
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3536 Predicted permease insig. 22 88