Homologs of SMc00522 from Sinorhizobium meliloti 1021

ATP-dependent RNA helicase
SEED: ATP-dependent RNA helicase Atu1833

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sinorhizobium meliloti 1021 SMc00522 ATP-dependent RNA helicase strong 100 100
o Rhizobium sp. OAE497 ABIE40_RS10055 DEAD/DEAH box helicase sig. 76 100
o Agrobacterium fabrum C58 Atu1833 ATP-dependent RNA helicase no data 75 100
  Bosea sp. OAE506 ABIE41_RS16930 DEAD/DEAH box helicase strong 70 76
o Xanthobacter sp. DMC5 GFF1339 ATP-dependent RNA helicase RhlE insig. 71 77
  Rhodopseudomonas palustris CGA009 TX73_012805 DEAD/DEAH box helicase strong 71 74
o Phaeobacter inhibens DSM 17395 PGA1_c10590 putative ATP-dependent RNA helicase RhlE insig. 51 99
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1574 Superfamily II DNA and RNA helicases strong 61 82
o Sphingobium sp. HT1-2 GFF3480 ATP-dependent RNA helicase Atu1833 cofit 60 83
o Azospirillum brasilense Sp245 AZOBR_RS22205 DNA helicase strong 53 98
o Dinoroseobacter shibae DFL-12 Dshi_1333 DEAD/DEAH box helicase domain protein (RefSeq) strong 64 73
o Azospirillum sp. SherDot2 MPMX19_00976 ATP-dependent RNA helicase RhlE insig. 62 76
o Magnetospirillum magneticum AMB-1 AMB_RS07010 ATP-dependent helicase strong 59 81
  Rhodospirillum rubrum S1H Rru_A2718 DEAD/DEAH box helicase (NCBI) no data 49 99
o Caulobacter crescentus NA1000 CCNA_01923 ATP-dependent RNA helicase strong 62 74
o Caulobacter crescentus NA1000 Δfur CCNA_01923 ATP-dependent RNA helicase cofit 62 74
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04615 DEAD/DEAH box helicase insig. 62 74
o Burkholderia phytofirmans PsJN BPHYT_RS06155 DEAD/DEAH box helicase strong 50 81
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF222 ATP-dependent RNA helicase Bcep18194_A5658 insig. 50 74
  Acidovorax sp. GW101-3H11 Ac3H11_1125 ATP-dependent RNA helicase Bcep18194_A5658 no data 49 80
o Paraburkholderia sabiae LMG 24235 QEN71_RS24485 DEAD/DEAH box helicase insig. 51 74
  Paraburkholderia graminis OAS925 ABIE53_001438 ATP-dependent RNA helicase RhlE strong 51 74
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00308 Superfamily II DNA and RNA helicase strong 51 74
o Variovorax sp. SCN45 GFF1917 ATP-dependent RNA helicase Bcep18194_A5658 strong 47 81
o Variovorax sp. OAS795 ABID97_RS22030 DEAD/DEAH box helicase strong 47 81
  Shewanella amazonensis SB2B Sama_2687 DEAD-box ATP dependent DNA helicase (RefSeq) insig. 43 95
  Cupriavidus basilensis FW507-4G11 RR42_RS02870 RNA helicase sig. 48 77
  Castellaniella sp019104865 MT123 ABCV34_RS12515 DEAD/DEAH box helicase cofit 48 74
  Ralstonia sp. UNC404CL21Col ABZR87_RS15540 DEAD/DEAH box helicase sig. 49 73
o Herbaspirillum seropedicae SmR1 HSERO_RS17855 DEAD/DEAH box helicase sig. 46 80
o Methylophilus sp. DMC18 GFF1280 ATP-dependent RNA helicase RhlE insig. 45 79
o Ralstonia solanacearum PSI07 RPSI07_RS13580 ATP-dependent helicase sig. 49 73
  Shewanella loihica PV-4 Shew_0604 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 47 76
  Shewanella sp. ANA-3 Shewana3_0810 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 41 96
  Pseudomonas simiae WCS417 PS417_26525 DEAD/DEAH box helicase strong 45 78
  Pseudomonas fluorescens SBW25 PFLU_RS28180 DEAD/DEAH box helicase cofit 45 78
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28180 DEAD/DEAH box helicase sig. 45 78
  Shewanella oneidensis MR-1 SO3783 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 44 84
  Pseudomonas sp. DMC3 GFF174 ATP-dependent RNA helicase RhlE cofit 46 79
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05436 ATP-dependent RNA helicase RhlE cofit 45 78
  Pseudomonas stutzeri RCH2 Psest_0312 Superfamily II DNA and RNA helicases strong 40 91
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03650 ATP-dependent helicase insig. 49 73
  Ralstonia solanacearum UW163 UW163_RS10020 ATP-dependent helicase insig. 49 73
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1048 ATP-dependent RNA helicase RhlE sig. 45 79
  Pseudomonas fluorescens FW300-N2E3 AO353_08030 DEAD/DEAH box helicase sig. 45 79
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4635 ATP-dependent RNA helicase RhlE strong 45 79
  Agrobacterium fabrum C58 Atu2333 ATP-dependent RNA helicase strong 46 75
  Pseudomonas syringae pv. syringae B728a Psyr_0458 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal insig. 45 79
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0458 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal insig. 45 79
  Pseudomonas sp. SVBP6 COO64_RS17470 DEAD/DEAH box helicase insig. 44 81
o Ralstonia solanacearum GMI1000 RS_RS11095 ATP-dependent helicase sig. 48 73
  Azospirillum sp. SherDot2 MPMX19_02011 RNA helicase CrhR strong 44 92
  Pseudomonas sp. RS175 PFR28_04204 ATP-dependent RNA helicase RhlE sig. 45 78
  Erwinia tracheiphila SCR3 LU632_RS09215 rhlE ATP-dependent RNA helicase RhlE cofit 45 80
  Methylophilus sp. DMC18 GFF1281 ATP-dependent RNA helicase RhlE cofit 44 81
  Dechlorosoma suillum PS Dsui_1351 DNA/RNA helicase, superfamily II strong 45 74
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2382 ATP-dependent RNA helicase RhlE sig. 45 79
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04222 ATP-dependent RNA helicase RhlE sig. 47 76
  Paraburkholderia graminis OAS925 ABIE53_003462 ATP-dependent RNA helicase RhlE sig. 47 76
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_19640 rhlE ATP-dependent RNA helicase RhlE cofit 45 80
  Herbaspirillum seropedicae SmR1 HSERO_RS08565 RNA helicase insig. 45 77
  Cupriavidus basilensis FW507-4G11 RR42_RS14810 DEAD/DEAH box helicase insig. 48 73
  Pseudomonas fluorescens FW300-N2C3 AO356_13590 DEAD/DEAH box helicase sig. 41 91
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16030 DEAD/DEAH box helicase insig. 45 77
  Pseudomonas putida KT2440 PP_4980 ATP-dependent RNA helicase sig. 43 81
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS03875 ATP-dependent RNA helicase RhlE cofit 47 76
  Methylophilus sp. DMC18 GFF250 ATP-dependent RNA helicase RhlE insig. 47 74
  Serratia liquefaciens MT49 IAI46_01970 DEAD/DEAH family ATP-dependent RNA helicase cofit 46 75
  Pseudomonas sp. BP01 JOY50_RS09795 DEAD/DEAH box helicase insig. 46 75
  Dechlorosoma suillum PS Dsui_3174 DNA/RNA helicase, superfamily II insig. 47 74
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS01200 DEAD/DEAH box helicase insig. 45 77
  Pantoea sp. MT58 IAI47_13435 ATP-dependent RNA helicase RhlE insig. 47 76
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02855 DEAD/DEAH box helicase sig. 42 84
  Pseudomonas segetis P6 MPMX49_00644 ATP-dependent RNA helicase RhlE strong 44 78
  Dickeya dadantii 3937 DDA3937_RS08645 ATP-dependent RNA helicase RhlE sig. 48 74
  Burkholderia phytofirmans PsJN BPHYT_RS16445 RNA helicase strong 47 76
  Phocaeicola dorei CL03T12C01 ABI39_RS02170 DEAD/DEAH box helicase insig. 41 84
  Dickeya dianthicola ME23 DZA65_RS09075 ATP-dependent RNA helicase RhlE insig. 47 74
  Paraburkholderia sabiae LMG 24235 QEN71_RS02265 DEAD/DEAH box helicase strong 47 77
  Dickeya dianthicola 67-19 HGI48_RS08785 ATP-dependent RNA helicase RhlE cofit 47 74
  Enterobacter asburiae PDN3 EX28DRAFT_2194 Superfamily II DNA and RNA helicases insig. 47 74
  Castellaniella sp019104865 MT123 ABCV34_RS07925 DEAD/DEAH box helicase cofit 47 77
  Azospirillum sp. SherDot2 MPMX19_06125 RNA helicase CrhR insig. 48 73
  Pseudomonas sp. S08-1 OH686_10835 ATP-dependent RNA helicase RhlE cofit 46 74
  Dechlorosoma suillum PS Dsui_3406 DNA/RNA helicase, superfamily II insig. 45 83
  Acidovorax sp. GW101-3H11 Ac3H11_386 ATP-dependent RNA helicase RhlE insig. 44 76
  Magnetospirillum magneticum AMB-1 AMB_RS07215 ATP-dependent helicase insig. 47 73
  Lysobacter sp. OAE881 ABIE51_RS12265 DEAD/DEAH box helicase insig. 46 74
  Rahnella sp. WP5 EX31_RS08510 DEAD/DEAH family ATP-dependent RNA helicase insig. 46 73
  Marinobacter adhaerens HP15 HP15_3607 DEAD/DEAH box helicase domain protein insig. 46 74
  Pectobacterium carotovorum WPP14 HER17_RS18175 DEAD/DEAH family ATP-dependent RNA helicase insig. 45 75
  Rhizobium sp. OAE497 ABIE40_RS13915 DEAD/DEAH box helicase insig. 45 75
  Xanthobacter sp. DMC5 GFF3462 ATP-dependent RNA helicase RhlE insig. 45 73
  Pseudomonas aeruginosa PA14 IKLFDK_23280 DEAD/DEAH box helicase cofit 43 80
  Serratia liquefaciens MT49 IAI46_06620 ATP-dependent RNA helicase RhlE insig. 47 74
  Shewanella amazonensis SB2B Sama_0512 ATP-dependent RNA helicase DeaD (RefSeq) strong 39 97
  Erwinia amylovora T8 OLJFJH_16685 ATP-dependent RNA helicase RhlE cofit 46 74
  Ralstonia solanacearum PSI07 RPSI07_RS21325 RNA helicase sig. 44 83
  Kangiella aquimarina DSM 16071 B158DRAFT_1850 ATP-dependent RNA helicase CsdA (EC 5.99.1.-) insig. 45 74
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS16115 DEAD/DEAH box helicase sig. 45 73