Homologs of PP_3497 from Pseudomonas putida KT2440

putative peptidase
SEED: Putative collagenase
KEGG: putative protease

192 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_3497 putative peptidase insig. 100 100
o Pseudomonas sp. BP01 JOY50_RS06055 U32 family peptidase insig. 97 100
o Pseudomonas sp. SVBP6 COO64_RS08140 U32 family peptidase insig. 89 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5107 Putative collagenase insig. 89 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1358 Putative collagenase insig. 88 100
o Pseudomonas fluorescens FW300-N2C3 AO356_25280 protease insig. 89 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3578 Putative collagenase insig. 88 100
o Pseudomonas sp. RS175 PFR28_01648 23S rRNA 5-hydroxycytidine synthase insig. 88 100
o Pseudomonas sp. DMC3 GFF2971 23S rRNA 5-hydroxycytidine synthase insig. 88 100
o Pseudomonas orientalis W4I3 QF045_RS16350 U32 family peptidase insig. 87 99
o Pseudomonas syringae pv. syringae B728a Psyr_3097 Peptidase U32 insig. 86 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3097 Peptidase U32 insig. 86 100
o Pseudomonas simiae WCS417 PS417_13670 protease insig. 87 99
o Pseudomonas fluorescens SBW25 PFLU_RS15170 U32 family peptidase insig. 86 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS15170 U32 family peptidase insig. 86 99
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03082 23S rRNA 5-hydroxycytidine synthase cofit 87 99
o Pseudomonas sp. S08-1 OH686_20270 Uncharacterized protease YdcP insig. 86 100
o Pseudomonas stutzeri RCH2 Psest_2765 Collagenase and related proteases insig. 79 100
o Enterobacter sp. TBS_079 MPMX20_02244 23S rRNA 5-hydroxycytidine synthase insig. 71 100
o Enterobacter asburiae PDN3 EX28DRAFT_1222 Collagenase and related proteases insig. 71 100
o Escherichia coli BL21 ECD_01393 putative peptidase no data 70 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02280 putative protease YdcP insig. 70 100
o Escherichia coli Nissle 1917 ECOLIN_RS08280 23S rRNA 5-hydroxycytidine C2501 synthase no data 70 100
o Escherichia coli BW25113 b1435 ydcP putative collagenase (VIMSS) insig. 70 100
o Escherichia fergusonii Becca EFB2_02547 23S rRNA 5-hydroxycytidine synthase insig. 70 100
o Escherichia coli ECRC101 MCAODC_16340 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase insig. 70 100
o Escherichia coli ECRC102 NIAGMN_25735 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase insig. 70 100
o Escherichia coli ECRC98 JDDGAC_04090 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase insig. 70 100
o Escherichia coli ECRC99 KEDOAH_26840 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase no data 70 100
o Escherichia coli ECRC62 BNILDI_17725 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase insig. 70 100
o Escherichia coli ECOR38 HEPCGN_26220 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase insig. 70 100
o Escherichia coli ECRC100 OKFHMN_01600 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase insig. 70 100
o Escherichia coli ECOR27 NOLOHH_19275 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase insig. 69 100
o Klebsiella michiganensis M5al BWI76_RS13375 protease insig. 71 100
o Klebsiella pneumoniae MKP103 KDGMDA_23145 collagenase-like protease insig. 70 100
o Klebsiella pneumoniae MRSN742743 KFA93_RS14190 peptidase U32 family protein insig. 70 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2594 putative collagenase insig. 69 99
o Methylophilus sp. DMC18 GFF2553 23S rRNA 5-hydroxycytidine synthase insig. 56 96
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4570 Probable collagenase (EC 3.4.24.3) insig. 57 95
o Acidovorax sp. GW101-3H11 Ac3H11_551 Probable collagenase (EC 3.4.24.3) insig. 55 96
o Dechlorosoma suillum PS Dsui_2754 collagenase-like protease insig. 54 94
o Shewanella amazonensis SB2B Sama_0677 U32 family peptidase (RefSeq) insig. 50 94
o Shewanella loihica PV-4 Shew_0818 peptidase U32 (RefSeq) insig. 50 94
o Shewanella sp. ANA-3 Shewana3_0800 peptidase U32 (RefSeq) cofit 50 95
o Shewanella oneidensis MR-1 SO3797 peptidase, U32 family (NCBI ptt file) insig. 49 95
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS09995 U32 family peptidase insig. 44 94
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14685 U32 family peptidase sig. 44 93
o Phocaeicola dorei CL03T12C01 ABI39_RS10365 U32 family peptidase cofit 44 93
o Bacteroides stercoris CC31F HMPREF1181_RS00100 U32 family peptidase cofit 42 94
o Bacteroides thetaiotaomicron VPI-5482 BT2412 putative collagenase (NCBI ptt file) sig. 44 94
o Bacteroides ovatus ATCC 8483 BACOVA_03008 peptidase, U32 family cofit 43 94
  Synechococcus elongatus PCC 7942 Synpcc7942_1622 probable proteinase insig. 33 76
  Fusobacterium nucleatum SB010 HUW76_01120 U32 family peptidase strong 29 75
  Bifidobacterium breve UCC2003 BBR_RS19280 peptidase U32 insig. 39 40
  Fusobacterium nucleatum SB010 HUW76_02115 U32 family peptidase strong 37 40
  Methanococcus maripaludis JJ MMJJ_RS01595 U32 family peptidase insig. 33 44
  Methanococcus maripaludis S2 MMP_RS03460 U32 family peptidase insig. 35 39
  Bacteroides stercoris CC31F HMPREF1181_RS01520 U32 family peptidase sig. 34 40
  Phocaeicola dorei CL03T12C01 ABI39_RS06130 U32 family peptidase cofit 34 40
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS10940 U32 family peptidase strong 34 40
  Bacteroides thetaiotaomicron VPI-5482 BT3072 collagenase precursor (NCBI ptt file) strong 35 39
  Bacteroides ovatus ATCC 8483 BACOVA_02723 peptidase, U32 family strong 33 40
  Desulfovibrio vulgaris Miyazaki F DvMF_2645 peptidase U32 (RefSeq) strong 35 38
  Klebsiella michiganensis M5al BWI76_RS19280 U32 family peptidase insig. 28 45
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05345 peptidase U32 family protein insig. 34 39
  Pseudomonas segetis P6 ACVTMO_RS03685 trhP prephenate-dependent tRNA uridine(34) hydroxylase TrhP insig. 28 48
  Pectobacterium carotovorum WPP14 HER17_RS06280 tRNA 5-hydroxyuridine modification protein YegQ cofit 27 47
  Desulfovibrio vulgaris Hildenborough JW710 DVU3314 peptidase, U32 family (TIGR) strong 35 48
  Klebsiella pneumoniae MRSN742743 KFA93_RS06810 yegQ;inference=COORDINATES tRNA 5-hydroxyuridine modification protein YegQ insig. 28 45
  Marinobacter adhaerens HP15 HP15_2983 peptidase, U32 family insig. 27 54
  Serratia liquefaciens MT49 IAI46_19015 tRNA 5-hydroxyuridine modification protein YegQ insig. 29 39
  Rahnella sp. WP5 EX31_RS20325 tRNA 5-hydroxyuridine modification protein YegQ insig. 28 45
  Klebsiella pneumoniae MKP103 KDGMDA_26330 tRNA 5-hydroxyuridine modification protein YegQ insig. 28 45
  Pantoea sp. MT58 IAI47_06845 tRNA 5-hydroxyuridine modification protein YegQ insig. 27 45
  Dechlorosoma suillum PS Dsui_0433 collagenase-like protease insig. 29 44
  Pseudomonas fluorescens FW300-N2E3 AO353_19800 protease insig. 28 45
  Pseudomonas fluorescens SBW25 PFLU_RS10460 tRNA 5-hydroxyuridine modification protein YegQ insig. 29 44
  Pseudomonas fluorescens SBW25-INTG PFLU_RS10460 tRNA 5-hydroxyuridine modification protein YegQ insig. 29 44
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS00955 U32 family peptidase cofit 27 45
  Pseudomonas simiae WCS417 PS417_10300 protease insig. 28 47
  Enterobacter asburiae PDN3 EX28DRAFT_0478 Collagenase and related proteases insig. 28 52
  Enterobacter sp. TBS_079 MPMX20_03067 23S rRNA 5-hydroxycytidine synthase sig. 28 52
  Dickeya dadantii 3937 DDA3937_RS15295 tRNA 5-hydroxyuridine modification protein YegQ insig. 27 48
  Desulfovibrio vulgaris Hildenborough JW710 DVU0654 peptidase, U32 family (TIGR) sig. 33 39
  Pseudomonas orientalis W4I3 QF045_RS12375 tRNA 5-hydroxyuridine modification protein YegQ cofit 29 46
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3925 Putative protease sig. 29 44
  Pseudomonas stutzeri RCH2 Psest_4096 Collagenase and related proteases insig. 29 48
  Pseudomonas sp. S08-1 OH686_13055 Uncharacterized protease YegQ insig. 28 46
  Pseudomonas sp. RS175 PFR28_02843 hypothetical protein insig. 28 45
  Pseudomonas fluorescens FW300-N2C3 AO356_21300 protease insig. 28 44
  Alteromonas macleodii MIT1002 MIT1002_02342 putative protease YhbU precursor insig. 28 40
  Escherichia coli BL21 ECD_01986 putative peptidase insig. 29 45
  Escherichia coli ECOR27 NOLOHH_15500 yegQ tRNA 5-hydroxyuridine modification protein YegQ insig. 29 45
  Escherichia coli ECOR38 HEPCGN_02845 yegQ tRNA 5-hydroxyuridine modification protein YegQ insig. 29 45
  Escherichia coli ECRC100 OKFHMN_24165 yegQ tRNA 5-hydroxyuridine modification protein YegQ cofit 29 45
  Escherichia coli ECRC101 MCAODC_20775 yegQ tRNA 5-hydroxyuridine modification protein YegQ insig. 29 45
  Escherichia coli ECRC102 NIAGMN_22110 yegQ tRNA 5-hydroxyuridine modification protein YegQ insig. 29 45
  Escherichia coli ECRC62 BNILDI_14415 yegQ tRNA 5-hydroxyuridine modification protein YegQ insig. 29 45
  Escherichia coli ECRC98 JDDGAC_28275 yegQ tRNA 5-hydroxyuridine modification protein YegQ insig. 29 45
  Escherichia coli ECRC99 KEDOAH_03985 yegQ tRNA 5-hydroxyuridine modification protein YegQ no data 29 45
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01623 putative protease YdcP insig. 29 45
  Escherichia coli Nissle 1917 ECOLIN_RS12250 tRNA 5-hydroxyuridine modification protein YegQ insig. 29 45
  Escherichia coli BW25113 b2081 yegQ predicted peptidase (NCBI) sig. 29 45
  Escherichia fergusonii Becca EFB2_01770 23S rRNA 5-hydroxycytidine synthase insig. 28 45
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2485 Putative protease insig. 29 39
  Kangiella aquimarina DSM 16071 B158DRAFT_1722 Collagenase and related proteases insig. 26 48
  Desulfovibrio vulgaris Miyazaki F DvMF_2141 peptidase U32 (RefSeq) no data 33 50
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_45 Putative protease insig. 28 44
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02169 23S rRNA 5-hydroxycytidine synthase insig. 29 42
  Shewanella sp. ANA-3 Shewana3_1068 peptidase U32 (RefSeq) strong 26 51
  Shewanella oneidensis MR-1 SO1252 peptidase, U32 family (NCBI ptt file) strong 26 51
  Pseudomonas sp. DMC3 GFF1422 23S rRNA 5-hydroxycytidine synthase cofit 29 39
  Pseudomonas putida KT2440 PP_2206 putative peptidase insig. 28 45
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3846 Putative protease insig. 28 45
  Shewanella loihica PV-4 Shew_2783 peptidase U32 (RefSeq) sig. 27 51
  Pseudomonas sp. BP01 JOY50_RS12690 yegQ tRNA 5-hydroxyuridine modification protein YegQ insig. 28 47
  Acinetobacter radioresistens SK82 MPMX26_02040 23S rRNA 5-hydroxycytidine synthase no data 26 54
  Pseudomonas aeruginosa MRSN321 DY961_RS25485 yegQ;inference=COORDINATES tRNA 5-hydroxyuridine modification protein YegQ insig. 29 44
  Pseudomonas aeruginosa PA14 IKLFDK_26220 tRNA 5-hydroxyuridine modification protein YegQ cofit 29 44
  Methylophilus sp. DMC18 GFF2319 hypothetical protein insig. 29 44
  Vibrio cholerae E7946 ATCC 55056 CSW01_03750 U32 family peptidase insig. 26 58
  Pseudomonas aeruginosa PUPa3 DQ20_RS57935 yegQ;inference=COORDINATES tRNA 5-hydroxyuridine modification protein YegQ insig. 29 44
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_18770 yegQ tRNA 5-hydroxyuridine modification protein YegQ cofit 26 49
  Erwinia tracheiphila SCR3 LU632_RS08665 yegQ tRNA 5-hydroxyuridine modification protein YegQ insig. 26 49
  Dickeya dianthicola 67-19 HGI48_RS15375 tRNA 5-hydroxyuridine modification protein YegQ insig. 27 48
  Dickeya dianthicola ME23 DZA65_RS16195 tRNA 5-hydroxyuridine modification protein YegQ insig. 27 48
  Shewanella oneidensis MR-1 SO1249 peptidase, U32 family (NCBI ptt file) insig. 31 39
  Acidovorax sp. GW101-3H11 Ac3H11_3295 Probable protease (EC 3.4.24.3) insig. 34 29
  Shewanella amazonensis SB2B Sama_1004 U32 family peptidase (RefSeq) strong 27 54
  Rhodopseudomonas palustris CGA009 TX73_004810 U32 family peptidase no data 30 41
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS09060 U32 family peptidase cofit 30 40
  Shewanella sp. ANA-3 Shewana3_1065 peptidase U32 (RefSeq) cofit 31 39
  Acinetobacter baumannii LAC-4 RR41_RS06110 tRNA 5-hydroxyuridine modification protein YegQ insig. 28 39
  Acidovorax sp. GW101-3H11 Ac3H11_4294 FIG139552: Putative protease sig. 30 40
  Pseudomonas sp. SVBP6 COO64_RS24350 yegQ tRNA 5-hydroxyuridine modification protein YegQ insig. 27 47
  Vibrio cholerae E7946 ATCC 55056 CSW01_03435 protease cofit 30 40
  Shewanella loihica PV-4 Shew_2787 peptidase U32 (RefSeq) insig. 31 40
  Erwinia tracheiphila SCR3 LU632_RS21005 U32 family peptidase insig. 29 39
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_14005 protease cofit 29 39
  Pectobacterium carotovorum WPP14 HER17_RS18160 U32 family peptidase cofit 31 38
  Pantoea sp. MT58 IAI47_16965 U32 family peptidase insig. 29 38
  Enterobacter asburiae PDN3 EX28DRAFT_3207 Collagenase and related proteases insig. 28 40
  Klebsiella michiganensis M5al BWI76_RS24970 peptidase U32 insig. 29 40
  Castellaniella sp019104865 MT123 ABCV34_RS06420 peptidase U32 family protein insig. 29 40
  Pseudomonas fluorescens FW300-N2E3 AO353_22050 protease insig. 30 39
  Enterobacter sp. TBS_079 MPMX20_04062 putative protease YhbU insig. 28 40
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5746 FIG139552: Putative protease sig. 31 39
  Dickeya dadantii 3937 DDA3937_RS03115 U32 family peptidase insig. 29 39
  Shewanella amazonensis SB2B Sama_0998 U32 family peptidase (RefSeq) insig. 28 40
  Escherichia fergusonii Becca EFB2_00665 putative protease YhbU cofit 30 40
  Escherichia coli Nissle 1917 ECOLIN_RS18140 peptidase U32 family protein insig. 29 40
  Klebsiella pneumoniae MKP103 KDGMDA_05840 protease insig. 29 40
  Klebsiella pneumoniae MRSN742743 KFA93_RS13035 peptidase U32 family protein insig. 29 40
  Escherichia coli BL21 ECD_03025 U32 peptidase family protein insig. 29 40
  Escherichia coli ECOR38 HEPCGN_17050 protease insig. 29 40
  Escherichia coli ECRC100 OKFHMN_18175 protease cofit 29 40
  Escherichia coli ECRC101 MCAODC_08695 protease insig. 29 40
  Escherichia coli ECRC98 JDDGAC_21800 protease insig. 29 40
  Escherichia coli ECRC99 KEDOAH_09975 protease no data 29 40
  Escherichia coli ECOR27 NOLOHH_09975 ubiU Ubiquinone biosynthesis protein UbiU insig. 29 40
  Escherichia coli ECRC102 NIAGMN_15935 ubiU Ubiquinone biosynthesis protein UbiU cofit 29 40
  Escherichia coli ECRC62 BNILDI_01555 ubiU Ubiquinone biosynthesis protein UbiU insig. 29 40
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00542 putative protease YhbU insig. 29 40
  Escherichia coli BW25113 b3158 yhbU predicted peptidase (collagenase-like) (NCBI) sig. 29 40
  Pseudomonas aeruginosa MRSN321 DY961_RS13305 peptidase U32 family protein insig. 29 41
  Pseudomonas aeruginosa PA14 IKLFDK_20175 protease insig. 29 41
  Pseudomonas aeruginosa PUPa3 DQ20_RS48610 peptidase U32 family protein insig. 29 41
  Dickeya dianthicola 67-19 HGI48_RS03290 U32 family peptidase insig. 29 39
  Dickeya dianthicola ME23 DZA65_RS03285 U32 family peptidase insig. 29 39
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1510 FIG139552: Putative protease insig. 29 38
  Magnetospirillum magneticum AMB-1 AMB_RS02530 U32 family peptidase strong 29 39
  Pseudomonas sp. SVBP6 COO64_RS14190 peptidase U32 family protein insig. 30 39
  Kangiella aquimarina DSM 16071 B158DRAFT_2375 Collagenase and related proteases insig. 27 39
  Agrobacterium fabrum C58 Atu4397 protease insig. 29 39
  Rahnella sp. WP5 EX31_RS08480 U32 family peptidase insig. 27 40
  Pseudomonas sp. RS175 PFR28_02214 putative protease YhbU insig. 30 39
  Pseudomonas stutzeri RCH2 Psest_0835 Collagenase and related proteases strong 28 40
  Pseudomonas simiae WCS417 PS417_15755 protease insig. 30 39
  Pseudomonas fluorescens FW300-N2C3 AO356_25160 protease strong 30 39
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_721 FIG139552: Putative protease strong 30 39
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS16695 protease insig. 30 40
  Ralstonia solanacearum UW163 UW163_RS18050 protease insig. 30 40
  Azospirillum sp. SherDot2 MPMX19_03049 putative protease YhbU insig. 30 40
  Ralstonia solanacearum PSI07 RPSI07_RS06750 U32 family peptidase insig. 28 40
  Sinorhizobium meliloti 1021 SMa1291 Protease insig. 29 39
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03433 putative protease YhbU cofit 29 39
  Serratia liquefaciens MT49 IAI46_02015 U32 family peptidase insig. 27 40
  Dechlorosoma suillum PS Dsui_0962 collagenase-like protease strong 27 41
  Azospirillum brasilense Sp245 AZOBR_RS28235 protease insig. 28 40
  Cupriavidus basilensis FW507-4G11 RR42_RS08775 protease insig. 28 38
  Ralstonia solanacearum GMI1000 RS_RS21795 U32 family peptidase insig. 30 40
  Rhodospirillum rubrum S1H Rru_A2525 Peptidase U32 (NCBI) strong 29 39