Homologs of MPMX26_02040 from Acinetobacter radioresistens SK82

23S rRNA 5-hydroxycytidine synthase
SEED: Putative protease
KEGG: putative protease

204 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Acinetobacter radioresistens SK82 MPMX26_02040 23S rRNA 5-hydroxycytidine synthase no data 100 100
o Acinetobacter baumannii LAC-4 RR41_RS06110 tRNA 5-hydroxyuridine modification protein YegQ insig. 78 98
o Serratia liquefaciens MT49 IAI46_19015 tRNA 5-hydroxyuridine modification protein YegQ insig. 67 96
o Alteromonas macleodii MIT1002 MIT1002_02342 putative protease YhbU precursor insig. 68 95
o Klebsiella pneumoniae MRSN742743 GJGHJB_01635 yegQ tRNA 5-hydroxyuridine modification protein YegQ insig. 68 95
o Klebsiella pneumoniae MKP103 KDGMDA_26330 tRNA 5-hydroxyuridine modification protein YegQ insig. 68 95
o Pseudomonas stutzeri RCH2 Psest_4096 Collagenase and related proteases insig. 67 97
o Rahnella sp. WP5 EX31_RS20325 tRNA 5-hydroxyuridine modification protein YegQ insig. 68 96
o Pseudomonas segetis P6 ACVTMO_RS03685 trhP prephenate-dependent tRNA uridine(34) hydroxylase TrhP insig. 67 96
o Klebsiella michiganensis M5al BWI76_RS19280 U32 family peptidase insig. 67 95
o Vibrio cholerae E7946 ATCC 55056 CSW01_03750 U32 family peptidase insig. 69 96
o Pseudomonas fluorescens SBW25 PFLU_RS10460 tRNA 5-hydroxyuridine modification protein YegQ insig. 67 95
o Pseudomonas fluorescens SBW25-INTG PFLU_RS10460 tRNA 5-hydroxyuridine modification protein YegQ insig. 67 95
o Pantoea sp. MT58 IAI47_06845 tRNA 5-hydroxyuridine modification protein YegQ insig. 68 95
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS07220 trhP prephenate-dependent tRNA uridine(34) hydroxylase TrhP cofit 67 95
o Pseudomonas orientalis W4I3 QF045_RS12375 tRNA 5-hydroxyuridine modification protein YegQ cofit 67 95
o Pseudomonas simiae WCS417 PS417_10300 protease insig. 67 95
o Pectobacterium carotovorum WPP14 HER17_RS06280 tRNA 5-hydroxyuridine modification protein YegQ cofit 66 96
o Escherichia coli ECOR38 HEPCGN_02845 yegQ tRNA 5-hydroxyuridine modification protein YegQ insig. 68 95
o Escherichia coli BL21 ECD_01986 putative peptidase insig. 68 95
o Escherichia coli ECRC100 OKFHMN_24165 yegQ tRNA 5-hydroxyuridine modification protein YegQ cofit 68 95
o Escherichia coli ECRC101 MCAODC_20775 yegQ tRNA 5-hydroxyuridine modification protein YegQ insig. 68 95
o Escherichia coli ECRC102 NIAGMN_22110 yegQ tRNA 5-hydroxyuridine modification protein YegQ insig. 68 95
o Escherichia coli ECRC62 BNILDI_14415 yegQ tRNA 5-hydroxyuridine modification protein YegQ insig. 68 95
o Escherichia coli ECRC98 JDDGAC_28275 yegQ tRNA 5-hydroxyuridine modification protein YegQ insig. 68 95
o Escherichia coli ECRC99 KEDOAH_03985 yegQ tRNA 5-hydroxyuridine modification protein YegQ no data 68 95
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01623 putative protease YdcP insig. 68 95
o Escherichia coli Nissle 1917 ECOLIN_RS12250 tRNA 5-hydroxyuridine modification protein YegQ insig. 68 95
o Pseudomonas sp. FW215-L2 GFF4662 putative protease YdcP insig. 66 95
o Escherichia coli ECOR27 NOLOHH_15500 yegQ tRNA 5-hydroxyuridine modification protein YegQ sig. 68 95
o Escherichia coli BW25113 b2081 yegQ predicted peptidase (NCBI) sig. 68 95
o Escherichia fergusonii Becca EFB2_01770 23S rRNA 5-hydroxycytidine synthase insig. 68 95
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3846 Putative protease insig. 68 95
o Shewanella amazonensis SB2B Sama_1004 U32 family peptidase (RefSeq) strong 65 96
o Pseudomonas fluorescens FW300-N2C3 AO356_21300 protease insig. 65 96
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_18770 yegQ tRNA 5-hydroxyuridine modification protein YegQ cofit 67 97
o Erwinia tracheiphila SCR3 LU632_RS08665 yegQ tRNA 5-hydroxyuridine modification protein YegQ insig. 67 97
o Shewanella oneidensis MR-1 SO1252 peptidase, U32 family (NCBI ptt file) strong 64 96
o Pseudomonas sp. S08-1 OH686_13055 Uncharacterized protease YegQ insig. 66 94
o Pseudomonas sp. DMC3 GFF1422 23S rRNA 5-hydroxycytidine synthase cofit 66 95
o Dickeya dadantii 3937 DDA3937_RS15295 tRNA 5-hydroxyuridine modification protein YegQ insig. 64 96
o Pseudomonas sp. RS175 PFR28_02843 hypothetical protein insig. 65 95
o Shewanella loihica PV-4 Shew_2783 peptidase U32 (RefSeq) sig. 65 96
o Pseudomonas fluorescens FW300-N2E3 AO353_19800 protease insig. 66 95
o Shewanella sp. ANA-3 Shewana3_1068 peptidase U32 (RefSeq) strong 64 96
o Enterobacter sp. TBS_079 MPMX20_03067 23S rRNA 5-hydroxycytidine synthase sig. 68 95
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3925 Putative protease sig. 65 95
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_45 Putative protease insig. 65 96
o Pseudomonas lactucae CFBP13502 GEMAOFIL_02169 23S rRNA 5-hydroxycytidine synthase insig. 66 94
o Enterobacter asburiae PDN3 EX28DRAFT_0478 Collagenase and related proteases insig. 68 95
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2485 Putative protease insig. 65 95
o Pseudomonas sp. SVBP6 COO64_RS24350 yegQ tRNA 5-hydroxyuridine modification protein YegQ insig. 67 96
o Pseudomonas protegens RBAN4 FABNJH_20725 yegQ tRNA 5-hydroxyuridine modification protein YegQ insig. 66 96
o Dickeya dianthicola ME23 DZA65_RS16195 tRNA 5-hydroxyuridine modification protein YegQ insig. 65 96
o Dickeya dianthicola 67-19 HGI48_RS15375 tRNA 5-hydroxyuridine modification protein YegQ insig. 65 96
o Pseudomonas aeruginosa MRSN321 PFGADD_05698 yegQ tRNA 5-hydroxyuridine modification protein YegQ insig. 66 95
o Pseudomonas aeruginosa PA14 IKLFDK_26220 tRNA 5-hydroxyuridine modification protein YegQ cofit 66 95
o Pseudomonas putida KT2440 PP_2206 putative peptidase insig. 66 92
o Pseudomonas aeruginosa PUPa3 NPBIFN_05774 yegQ tRNA 5-hydroxyuridine modification protein YegQ insig. 66 95
o Pseudomonas sp. BP01 JOY50_RS12690 yegQ tRNA 5-hydroxyuridine modification protein YegQ insig. 65 96
o Marinobacter adhaerens HP15 HP15_2983 peptidase, U32 family insig. 61 95
o Kangiella aquimarina DSM 16071 B158DRAFT_1722 Collagenase and related proteases insig. 62 92
o Methylophilus sp. DMC18 GFF2319 hypothetical protein insig. 58 92
o Acidovorax sp. GW101-3H11 Ac3H11_3295 Probable protease (EC 3.4.24.3) insig. 52 98
o Dechlorosoma suillum PS Dsui_0433 collagenase-like protease insig. 54 95
o Fusobacterium nucleatum SB010 HUW76_02115 U32 family peptidase strong 36 84
  Desulfovibrio vulgaris Hildenborough JW710 DVU0654 peptidase, U32 family (TIGR) sig. 36 74
  Bifidobacterium breve UCC2003 BBR_RS19280 peptidase U32 insig. 34 69
  Desulfovibrio vulgaris Miyazaki F DvMF_2645 peptidase U32 (RefSeq) strong 35 74
  Methanococcus maripaludis JJ MMJJ_RS01595 U32 family peptidase insig. 33 74
  Synechococcus elongatus PCC 7942 Synpcc7942_1622 probable proteinase insig. 33 85
  Methanococcus maripaludis S2 MMP_RS03460 U32 family peptidase insig. 32 74
  Acidovorax sp. GW101-3H11 Ac3H11_4294 FIG139552: Putative protease sig. 31 67
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS09995 U32 family peptidase insig. 29 87
  Klebsiella michiganensis M5al BWI76_RS13375 protease insig. 29 88
  Fusobacterium nucleatum SB010 HUW76_01120 U32 family peptidase strong 28 73
  Escherichia fergusonii Becca EFB2_02547 23S rRNA 5-hydroxycytidine synthase insig. 29 89
  Escherichia coli Nissle 1917 ECOLIN_RS08280 23S rRNA 5-hydroxycytidine C2501 synthase no data 29 89
  Castellaniella sp019104865 MT123 ABCV34_RS06420 peptidase U32 family protein insig. 32 67
  Escherichia coli ECOR27 NOLOHH_19275 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase insig. 29 87
  Enterobacter sp. TBS_079 MPMX20_02244 23S rRNA 5-hydroxycytidine synthase insig. 28 89
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS16695 protease insig. 31 70
  Ralstonia solanacearum UW163 UW163_RS18050 protease insig. 31 70
  Enterobacter asburiae PDN3 EX28DRAFT_1222 Collagenase and related proteases insig. 28 89
  Escherichia coli ECOR38 HEPCGN_26220 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase insig. 28 89
  Ralstonia solanacearum PSI07 RPSI07_RS06750 U32 family peptidase insig. 29 72
  Klebsiella pneumoniae MKP103 KDGMDA_23145 collagenase-like protease insig. 28 88
  Shewanella oneidensis MR-1 SO1249 peptidase, U32 family (NCBI ptt file) insig. 31 67
  Escherichia coli BL21 ECD_01393 putative peptidase no data 28 89
  Escherichia coli ECRC62 BNILDI_17725 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase insig. 28 89
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02280 putative protease YdcP insig. 28 89
  Bacteroides ovatus ATCC 8483 BACOVA_03008 peptidase, U32 family cofit 28 85
  Phocaeicola dorei CL03T12C01 ABI39_RS10365 U32 family peptidase cofit 28 85
  Bacteroides thetaiotaomicron VPI-5482 BT2412 putative collagenase (NCBI ptt file) sig. 28 85
  Escherichia coli ECRC101 MCAODC_16340 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase insig. 28 89
  Escherichia coli ECRC102 NIAGMN_25735 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase insig. 28 89
  Escherichia coli ECRC98 JDDGAC_04090 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase insig. 28 89
  Escherichia coli ECRC99 KEDOAH_26840 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase no data 28 89
  Escherichia coli BW25113 b1435 ydcP putative collagenase (VIMSS) insig. 28 89
  Escherichia coli ECRC100 OKFHMN_01600 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase insig. 28 89
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14685 U32 family peptidase sig. 28 85
  Klebsiella pneumoniae MRSN742743 GJGHJB_02247 rlhA Protease YdcP insig. 27 88
  Shewanella sp. ANA-3 Shewana3_0800 peptidase U32 (RefSeq) cofit 28 93
  Bacteroides stercoris CC31F HMPREF1181_RS00100 U32 family peptidase cofit 28 85
  Shewanella sp. ANA-3 Shewana3_1065 peptidase U32 (RefSeq) cofit 31 67
  Pseudomonas fluorescens FW300-N2C3 AO356_25280 protease insig. 28 88
  Pseudomonas sp. SVBP6 COO64_RS08140 U32 family peptidase insig. 28 89
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2594 putative collagenase insig. 27 86
  Dechlorosoma suillum PS Dsui_0962 collagenase-like protease strong 30 68
  Shewanella amazonensis SB2B Sama_0998 U32 family peptidase (RefSeq) insig. 32 67
  Pseudomonas sp. RS175 PFR28_01648 23S rRNA 5-hydroxycytidine synthase insig. 28 88
  Pseudomonas simiae WCS417 PS417_13670 protease insig. 28 88
  Shewanella loihica PV-4 Shew_0818 peptidase U32 (RefSeq) insig. 28 85
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1358 Putative collagenase insig. 28 88
  Pseudomonas fluorescens SBW25 PFLU_RS15170 U32 family peptidase insig. 27 88
  Pseudomonas fluorescens SBW25-INTG PFLU_RS15170 U32 family peptidase insig. 27 88
  Shewanella oneidensis MR-1 SO3797 peptidase, U32 family (NCBI ptt file) insig. 29 92
  Pseudomonas sp. FW215-L2 GFF6566 putative protease YdcP no data 28 88
  Pseudomonas orientalis W4I3 QF045_RS16350 U32 family peptidase insig. 27 88
  Pseudomonas stutzeri RCH2 Psest_2765 Collagenase and related proteases insig. 27 86
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5107 Putative collagenase insig. 29 68
  Dechlorosoma suillum PS Dsui_2754 collagenase-like protease insig. 28 87
  Magnetospirillum magneticum AMB-1 AMB_RS02530 U32 family peptidase strong 32 68
  Shewanella loihica PV-4 Shew_2787 peptidase U32 (RefSeq) insig. 29 67
  Pseudomonas sp. BP01 JOY50_RS06055 U32 family peptidase insig. 27 88
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03082 23S rRNA 5-hydroxycytidine synthase cofit 27 88
  Pseudomonas putida KT2440 PP_3497 putative peptidase insig. 26 88
  Pseudomonas syringae pv. syringae B728a Psyr_3097 Peptidase U32 insig. 30 68
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3097 Peptidase U32 insig. 30 68
  Pseudomonas sp. DMC3 GFF2971 23S rRNA 5-hydroxycytidine synthase insig. 27 88
  Vibrio cholerae E7946 ATCC 55056 CSW01_03435 protease cofit 30 67
  Pseudomonas protegens RBAN4 FABNJH_15310 ydcP Protease YdcP insig. 28 88
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3578 Putative collagenase insig. 27 88
  Azospirillum sp. SherDot2 MPMX19_03049 putative protease YhbU insig. 32 68
  Pseudomonas stutzeri RCH2 Psest_0835 Collagenase and related proteases strong 30 67
  Bacteroides stercoris CC31F HMPREF1181_RS01520 U32 family peptidase sig. 27 78
  Acidovorax sp. GW101-3H11 Ac3H11_551 Probable collagenase (EC 3.4.24.3) insig. 27 84
  Kangiella aquimarina DSM 16071 B158DRAFT_2375 Collagenase and related proteases insig. 30 67
  Bacteroides ovatus ATCC 8483 BACOVA_02723 peptidase, U32 family strong 28 87
  Pantoea sp. MT58 IAI47_16965 U32 family peptidase insig. 30 67
  Rhodopseudomonas palustris CGA009 TX73_004810 U32 family peptidase no data 28 76
  Bacteroides thetaiotaomicron VPI-5482 BT3072 collagenase precursor (NCBI ptt file) strong 27 87
  Cupriavidus basilensis FW507-4G11 RR42_RS08775 protease insig. 30 71
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS17185 ubiU ubiquinone anaerobic biosynthesis protein UbiU cofit 29 67
  Dickeya dianthicola 67-19 HGI48_RS03290 U32 family peptidase insig. 28 71
  Dickeya dianthicola ME23 DZA65_RS03285 U32 family peptidase insig. 28 71
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4570 Probable collagenase (EC 3.4.24.3) insig. 29 69
  Klebsiella michiganensis M5al BWI76_RS24970 peptidase U32 insig. 29 67
  Shewanella amazonensis SB2B Sama_0677 U32 family peptidase (RefSeq) insig. 28 83
  Azospirillum brasilense Sp245 AZOBR_RS28235 protease insig. 32 68
  Dickeya dadantii 3937 DDA3937_RS03115 U32 family peptidase insig. 28 71
  Pseudomonas aeruginosa MRSN321 PFGADD_01045 ubiU Ubiquinone biosynthesis protein UbiU insig. 29 72
  Pseudomonas aeruginosa PA14 IKLFDK_20175 protease insig. 29 72
  Pseudomonas aeruginosa PUPa3 NPBIFN_01049 ubiU Ubiquinone biosynthesis protein UbiU insig. 29 72
  Pectobacterium carotovorum WPP14 HER17_RS18160 U32 family peptidase cofit 28 67
  Sinorhizobium meliloti 1021 SMa1291 Protease insig. 31 66
  Methylophilus sp. DMC18 GFF2553 23S rRNA 5-hydroxycytidine synthase insig. 26 83
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1510 FIG139552: Putative protease insig. 28 67
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_14005 protease cofit 29 67
  Erwinia tracheiphila SCR3 LU632_RS21005 U32 family peptidase insig. 29 67
  Escherichia fergusonii Becca EFB2_00665 putative protease YhbU cofit 29 67
  Escherichia coli Nissle 1917 ECOLIN_RS18140 peptidase U32 family protein insig. 29 67
  Klebsiella pneumoniae MKP103 KDGMDA_05840 protease insig. 28 67
  Klebsiella pneumoniae MRSN742743 GJGHJB_00558 rlhA Ubiquinone biosynthesis protein UbiU insig. 28 67
  Pseudomonas fluorescens FW300-N2E3 AO353_22050 protease insig. 29 67
  Pseudomonas sp. S08-1 OH686_20270 Uncharacterized protease YdcP insig. 29 68
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5746 FIG139552: Putative protease sig. 29 67
  Pseudomonas sp. SVBP6 COO64_RS14190 peptidase U32 family protein insig. 29 67
  Escherichia coli BL21 ECD_03025 U32 peptidase family protein insig. 28 67
  Escherichia coli ECOR27 NOLOHH_09975 ubiU Ubiquinone biosynthesis protein UbiU insig. 28 67
  Escherichia coli ECOR38 HEPCGN_17050 protease insig. 28 67
  Escherichia coli ECRC100 OKFHMN_18175 protease cofit 28 67
  Escherichia coli ECRC101 MCAODC_08695 protease insig. 28 67
  Escherichia coli ECRC62 BNILDI_01555 ubiU Ubiquinone biosynthesis protein UbiU insig. 28 67
  Escherichia coli ECRC98 JDDGAC_21800 protease insig. 28 67
  Escherichia coli ECRC99 KEDOAH_09975 protease no data 28 67
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00542 putative protease YhbU insig. 28 67
  Escherichia coli BW25113 b3158 yhbU predicted peptidase (collagenase-like) (NCBI) sig. 28 67
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05345 peptidase U32 family protein insig. 26 77
  Escherichia coli ECRC102 NIAGMN_15935 ubiU Ubiquinone biosynthesis protein UbiU cofit 28 67
  Enterobacter sp. TBS_079 MPMX20_04062 putative protease YhbU insig. 29 67
  Enterobacter asburiae PDN3 EX28DRAFT_3207 Collagenase and related proteases insig. 27 67
  Pseudomonas fluorescens FW300-N2C3 AO356_25160 protease strong 28 67
  Ralstonia solanacearum GMI1000 RS_RS21795 U32 family peptidase insig. 29 70
  Desulfovibrio vulgaris Miyazaki F DvMF_2141 peptidase U32 (RefSeq) no data 34 50
  Pseudomonas simiae WCS417 PS417_15755 protease insig. 29 67
  Agrobacterium fabrum C58 Atu4397 protease insig. 30 66
  Pseudomonas sp. RS175 PFR28_02214 putative protease YhbU insig. 27 67
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_721 FIG139552: Putative protease strong 27 67
  Serratia liquefaciens MT49 IAI46_02015 U32 family peptidase insig. 27 67
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03433 putative protease YhbU cofit 28 67
  Rahnella sp. WP5 EX31_RS08480 U32 family peptidase insig. 28 67
  Phocaeicola dorei CL03T12C01 ABI39_RS06130 U32 family peptidase cofit 27 87
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS10940 U32 family peptidase strong 27 87
  Desulfovibrio vulgaris Hildenborough JW710 DVU3314 peptidase, U32 family (TIGR) strong 35 48
  Rhodospirillum rubrum S1H Rru_A2525 Peptidase U32 (NCBI) strong 27 73
  Shewanella sp. ANA-3 Shewana3_1064 peptidase U32 (RefSeq) insig. 26 22
  Shewanella loihica PV-4 Shew_2788 peptidase U32 (RefSeq) insig. 30 21
  Shewanella oneidensis MR-1 SO1248 hypothetical peptidase (NCBI ptt file) insig. 26 22
  Rhodopseudomonas palustris CGA009 TX73_004815 U32 family peptidase no data 36 13
  Agrobacterium fabrum C58 Atu4398 hypothetical protein insig. 27 33
  Vibrio cholerae E7946 ATCC 55056 CSW01_03430 U32 family peptidase insig. 29 22
  Dechlorosoma suillum PS Dsui_0963 collagenase-like protease strong 27 37
  Rahnella sp. WP5 EX31_RS08485 U32 family peptidase insig. 28 22