Homologs of MIT1002_02998 from Alteromonas macleodii MIT1002

Efflux pump membrane transporter BepE
SEED: RND efflux system, inner membrane transporter CmeB

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Alteromonas macleodii MIT1002 MIT1002_02998 Efflux pump membrane transporter BepE insig. 100 100
o Shewanella sp. ANA-3 Shewana3_1078 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) cofit 75 100
o Shewanella oneidensis MR-1 SO3492 mexF RND multidrug efflux transporter MexF (NCBI ptt file) insig. 76 100
o Pseudomonas fluorescens SBW25 PFLU_RS14260 efflux RND transporter permease subunit insig. 70 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS14260 efflux RND transporter permease subunit insig. 70 100
o Pseudomonas simiae WCS417 PS417_13190 transporter insig. 70 100
o Pseudomonas stutzeri RCH2 Psest_2144 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family sig. 71 100
o Pseudomonas putida KT2440 PP_3426 Multidrug efflux RND transporter MexF sig. 70 100
o Pseudomonas syringae pv. syringae B728a Psyr_2968 Hydrophobe/amphiphile efflux-1 HAE1 sig. 69 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2968 Hydrophobe/amphiphile efflux-1 HAE1 strong 69 100
o Pseudomonas fluorescens FW300-N2C3 AO356_27605 transporter strong 69 100
o Pseudomonas sp. S08-1 OH686_01005 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) cofit 70 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4864 Multidrug efflux transporter MexF insig. 69 100
o Pseudomonas fluorescens FW300-N2E3 AO353_23960 transporter sig. 69 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_824 Multidrug efflux transporter MexF strong 69 100
o Pseudomonas sp. RS175 PFR28_01728 multidrug efflux RND transporter permease subunit OqxB27 insig. 69 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3060 Multidrug efflux transporter MexF insig. 69 100
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_948 Multidrug efflux transporter MexF insig. 68 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS15400 efflux RND transporter permease subunit cofit 68 100
o Rhodanobacter denitrificans MT42 LRK55_RS07890 efflux RND transporter permease subunit cofit 68 100
o Rhodanobacter sp. FW510-T8 OKGIIK_14955 oqxB multidrug efflux RND transporter permease subunit insig. 68 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS08140 multidrug efflux RND transporter permease subunit insig. 68 100
o Acidovorax sp. GW101-3H11 Ac3H11_258 RND multidrug efflux transporter; Acriflavin resistance protein insig. 66 100
o Variovorax sp. OAS795 ABID97_RS17350 efflux RND transporter permease subunit insig. 65 100
o Rhizobium sp. OAE497 ABIE40_RS14875 multidrug efflux RND transporter permease subunit insig. 65 100
o Variovorax sp. SCN45 GFF429 RND efflux system, inner membrane transporter insig. 64 100
o Magnetospirillum magneticum AMB-1 AMB_RS09480 multidrug efflux RND transporter permease subunit cofit 64 100
o Rhodospirillum rubrum S1H Rru_A0886 Hydrophobe/amphiphile efflux-1 HAE1 (NCBI) insig. 64 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS19400 efflux RND transporter permease subunit insig. 66 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS20105 efflux RND transporter permease subunit cofit 64 100
o Ralstonia solanacearum PSI07 RPSI07_RS05175 multidrug efflux RND transporter permease subunit strong 66 100
o Ralstonia solanacearum UW163 UW163_RS20755 multidrug efflux RND transporter permease subunit insig. 66 100
o Azospirillum brasilense Sp245 AZOBR_RS28205 transporter insig. 64 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS18375 multidrug efflux RND transporter permease subunit strong 66 100
o Ralstonia solanacearum GMI1000 RS_RS22490 multidrug efflux RND transporter permease subunit strong 65 100
o Sinorhizobium meliloti 1021 SMc01095 multidrug-efflux system transmembrane protein insig. 64 100
o Paraburkholderia graminis OAS925 ABIE53_004106 multidrug efflux pump strong 63 100
o Agrobacterium fabrum C58 Atu2483 AcrB/AcrD/AcrF family protein strong 65 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03190 multidrug efflux pump insig. 63 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4246 RND efflux system, inner membrane transporter CmeB insig. 61 100
o Burkholderia phytofirmans PsJN BPHYT_RS22515 multidrug efflux RND transporter permease subunit strong 63 100
o Dechlorosoma suillum PS Dsui_2026 hydrophobe/amphiphile efflux-1 (HAE1) family transporter cofit 63 100
o Azospirillum sp. SherDot2 MPMX19_02968 multidrug efflux RND transporter permease subunit OqxB28 insig. 63 100
o Cupriavidus basilensis FW507-4G11 RR42_RS27685 multidrug efflux RND transporter permease subunit sig. 65 99
o Serratia liquefaciens MT49 IAI46_13385 efflux RND transporter permease subunit insig. 60 100
o Herbaspirillum seropedicae SmR1 HSERO_RS01560 transporter insig. 64 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0436 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family insig. 60 100
  Paraburkholderia sabiae LMG 24235 QEN71_RS37930 multidrug efflux RND transporter permease subunit insig. 61 100
  Pseudomonas sp. RS175 PFR28_02013 multidrug efflux RND transporter permease subunit OqxB10 insig. 58 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3477.1 RND efflux system, inner membrane transporter CmeB insig. 57 100
o Pantoea sp. MT58 IAI47_10310 multidrug efflux RND transporter permease subunit OqxB insig. 57 100
o Rahnella sp. WP5 EX31_RS01495 multidrug efflux RND transporter permease subunit insig. 57 100
  Serratia liquefaciens MT49 IAI46_09925 multidrug efflux RND transporter permease subunit SdeB insig. 57 100
o Klebsiella michiganensis M5al BWI76_RS12955 multidrug efflux RND transporter permease subunit OqxB sig. 57 100
o Enterobacter asburiae PDN3 EX28DRAFT_1472 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family cofit 57 100
o Enterobacter sp. TBS_079 MPMX20_01155 multidrug efflux RND transporter permease subunit OqxB3 insig. 57 100
o Lysobacter sp. OAE881 ABIE51_RS01060 multidrug efflux RND transporter permease subunit cofit 55 100
  Sinorhizobium meliloti 1021 SMc03971 multidrug-efflux system transmembrane protein insig. 52 99
  Rhizobium sp. OAE497 ABIE40_RS14935 efflux RND transporter permease subunit insig. 51 100
  Magnetospirillum magneticum AMB-1 AMB_RS17325 multidrug efflux RND transporter permease subunit insig. 51 100
  Azospirillum brasilense Sp245 AZOBR_RS16485 RND transporter insig. 51 100
  Paraburkholderia graminis OAS925 ABIE53_002687 hydrophobe/amphiphile efflux-1 (HAE1) family protein sig. 48 100
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1850 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family insig. 50 99
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS09925 multidrug efflux RND transporter permease subunit strong 48 99
o Desulfovibrio vulgaris Hildenborough JW710 DVU0061 multidrug resistance protein, putative (TIGR) strong 47 99
o Desulfovibrio vulgaris Miyazaki F DvMF_0036 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family (RefSeq) insig. 46 100
o Shewanella loihica PV-4 Shew_1164 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) insig. 46 100
  Desulfovibrio vulgaris Hildenborough JW710 DVU3248 AcrB/AcrD/AcrF family protein (TIGR) insig. 47 99
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3519 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family strong 49 100
  Pseudomonas sp. S08-1 OH686_07370 RND efflux system, inner membrane transporter cofit 45 100
  Desulfovibrio vulgaris Miyazaki F DvMF_2163 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family (RefSeq) strong 47 99
  Rhizobium sp. OAE497 ABIE40_RS23875 multidrug efflux RND transporter permease subunit insig. 46 100
  Sinorhizobium meliloti 1021 SMa1662 Cation/multidrug efflux pump insig. 44 100
o Marinobacter adhaerens HP15 HP15_933 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family insig. 44 100
  Dechlorosoma suillum PS Dsui_1871 hydrophobe/amphiphile efflux-1 (HAE1) family transporter strong 43 100
  Burkholderia phytofirmans PsJN BPHYT_RS20640 multidrug efflux RND transporter permease subunit insig. 44 99
  Paraburkholderia graminis OAS925 ABIE53_005788 multidrug efflux pump insig. 43 100
  Shewanella loihica PV-4 Shew_3796 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) insig. 43 100
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02440 multidrug efflux RND transporter permease subunit insig. 43 100
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3740 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family strong 44 100
o Bacteroides ovatus ATCC 8483 BACOVA_02607 RND transporter, HAE1 family cofit 43 100
o Phocaeicola dorei CL03T12C01 ABI39_RS01690 multidrug efflux RND transporter permease subunit insig. 43 99
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03655 multidrug efflux RND transporter permease subunit strong 43 100
o Bacteroides thetaiotaomicron VPI-5482 BT0886 putative cation efflux pump (NCBI ptt file) sig. 43 100
o Bacteroides stercoris CC31F HMPREF1181_RS14290 efflux RND transporter permease subunit insig. 43 100
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01393 hydrophobic/amphiphilic exporter-1, HAE1 family insig. 43 99
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS07690 multidrug efflux RND transporter permease subunit insig. 43 99
o Rhodopseudomonas palustris CGA009 TX73_015325 efflux RND transporter permease subunit insig. 41 100
  Herbaspirillum seropedicae SmR1 HSERO_RS02410 acriflavine resistance protein B strong 41 100
  Burkholderia phytofirmans PsJN BPHYT_RS29005 transporter insig. 43 100
  Paraburkholderia sabiae LMG 24235 QEN71_RS03455 multidrug efflux RND transporter permease subunit insig. 43 100
  Paraburkholderia sabiae LMG 24235 QEN71_RS09205 multidrug efflux RND transporter permease subunit no data 43 100
  Sinorhizobium meliloti 1021 SM_b21498 acriflavin resistance protein insig. 44 100
  Enterobacter sp. TBS_079 MPMX20_01142 Efflux pump membrane transporter BepG insig. 41 99
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12545 efflux RND transporter permease subunit cofit 42 99
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01877 multidrug efflux pump insig. 43 100
  Sinorhizobium meliloti 1021 SMc02867 multidrug-efflux system transmembrane protein strong 43 98
  Enterobacter asburiae PDN3 EX28DRAFT_2418 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family insig. 41 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4772 RND efflux system, inner membrane transporter CmeB strong 42 98
  Enterobacter asburiae PDN3 EX28DRAFT_0191 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family insig. 41 100