Homologs of LRK55_RS13575 from Rhodanobacter denitrificans MT42

GGDEF domain-containing protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodanobacter denitrificans MT42 LRK55_RS13575 GGDEF domain-containing protein insig. 100 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS13860 phosphodiesterase insig. 100 100
o Rhodanobacter sp. FW510-T8 OKGIIK_13885 eAL phosphodiesterase insig. 92 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS35195 phosphodiesterase insig. 44 97
o Acidovorax sp. GW101-3H11 Ac3H11_1101 diguanylate cyclase/phosphodiesterase insig. 43 97
o Variovorax sp. SCN45 GFF6204 Diguanylate cyclase/phosphodiesterase domain 2 (EAL) insig. 45 97
o Burkholderia phytofirmans PsJN BPHYT_RS02060 diguanylate cyclase insig. 42 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS00990 phosphodiesterase insig. 43 93
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02115 diguanylate cyclase/phosphodiesterase insig. 42 95
o Cupriavidus basilensis FW507-4G11 RR42_RS35575 diguanylate cyclase insig. 44 89
o Ralstonia sp. UNC404CL21Col ABZR87_RS22805 phosphodiesterase insig. 43 94
o Ralstonia solanacearum PSI07 RPSI07_RS01135 phosphodiesterase insig. 43 94
o Herbaspirillum seropedicae SmR1 HSERO_RS09540 diguanylate cyclase insig. 38 95
o Dechlorosoma suillum PS Dsui_2890 diguanylate cyclase (GGDEF) domain-containing protein cofit 38 96
o Pseudomonas fluorescens FW300-N2C3 AO356_19330 diguanylate phosphodiesterase insig. 35 95
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5779 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 35 95
o Pseudomonas sp. RS175 PFR28_03170 hypothetical protein insig. 35 94
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3740 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 35 95
o Pseudomonas syringae pv. syringae B728a Psyr_1598 diguanylate cyclase/phosphodiesterase insig. 35 95
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1598 diguanylate cyclase/phosphodiesterase insig. 35 95
o Pseudomonas fluorescens FW300-N2E3 AO353_02445 diguanylate phosphodiesterase insig. 35 95
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4208 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 35 95
o Pseudomonas simiae WCS417 PS417_09320 diguanylate phosphodiesterase insig. 34 96
o Pseudomonas fluorescens SBW25 PFLU_RS09975 EAL and GGDEF domain-containing protein insig. 34 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS09975 EAL and GGDEF domain-containing protein insig. 34 96
o Castellaniella sp019104865 MT123 ABCV34_RS04665 GGDEF domain-containing protein insig. 37 96
  Castellaniella sp019104865 MT123 ABCV34_RS03850 GGDEF domain-containing protein insig. 35 97
o Shewanella oneidensis MR-1 SO0555 conserved hypothetical protein (NCBI ptt file) insig. 32 96
o Shewanella amazonensis SB2B Sama_3153 putative diguanylate phosphodiesterase (RefSeq) insig. 32 96
  Paraburkholderia graminis OAS925 ABIE53_000557 EAL domain-containing protein (putative c-di-GMP-specific phosphodiesterase class I) insig. 39 71
o Shewanella sp. ANA-3 Shewana3_0554 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 32 92
o Shewanella loihica PV-4 Shew_0436 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 31 90
  Pseudomonas sp. S08-1 OH686_19705 hypothetical protein insig. 34 79
  Desulfovibrio vulgaris Miyazaki F DvMF_0617 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 29 89
  Desulfovibrio vulgaris Hildenborough JW710 DVU1959 EAL domain/GGDEF domain protein (TIGR) insig. 30 92
o Agrobacterium fabrum C58 Atu0826 hypothetical protein insig. 30 94
o Rhizobium sp. OAE497 ABIE40_RS04540 EAL domain-containing protein insig. 29 91
o Sinorhizobium meliloti 1021 SMc00033 hypothetical protein insig. 29 93
o Azospirillum sp. SherDot2 MPMX19_00227 hypothetical protein insig. 32 91
o Magnetospirillum magneticum AMB-1 AMB_RS05620 GGDEF domain-containing protein cofit 29 88
  Dechlorosoma suillum PS Dsui_2301 diguanylate cyclase (GGDEF) domain-containing protein cofit 29 86
  Rhodospirillum rubrum S1H Rru_A3230 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) (NCBI) insig. 27 77
  Ralstonia solanacearum GMI1000 RS_RS26035 GGDEF domain-containing protein insig. 50 22
  Pseudomonas putida KT2440 PP_1718 putative diguanylate phosphodiesterase containing EAL domain insig. 33 53
  Vibrio cholerae E7946 ATCC 55056 CSW01_07985 EAL domain-containing protein cofit 33 38
  Paraburkholderia graminis OAS925 ABIE53_000556 GGDEF domain-containing protein insig. 48 24
  Kangiella aquimarina DSM 16071 B158DRAFT_0955 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 33 38
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1521 diguanylate cyclase (GGDEF) domain cofit 39 39
  Cupriavidus basilensis FW507-4G11 RR42_RS26740 protein serine/threonine phosphatase insig. 39 30
  Pseudomonas stutzeri RCH2 Psest_1188 FOG: EAL domain insig. 36 37
  Pantoea sp. MT58 IAI47_03300 EAL domain-containing protein insig. 34 39
  Pseudomonas sp. S08-1 OH686_19830 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 36 37
  Rhizobium sp. OAE497 ABIE40_RS15540 EAL domain-containing protein insig. 35 37
  Dechlorosoma suillum PS Dsui_2421 EAL domain-containing protein cofit 34 39
  Desulfovibrio vulgaris Miyazaki F DvMF_0768 response regulator receiver modulated diguanylate cyclase (RefSeq) insig. 40 23
  Variovorax sp. SCN45 GFF1588 Serine phosphatase RsbU, regulator of sigma subunit insig. 39 22
  Desulfovibrio vulgaris Hildenborough JW710 DVU2067 GGDEF domain protein (TIGR) insig. 38 23
  Pseudomonas putida KT2440 PP_1144 conserved membrane protein of unknown function insig. 36 37
  Rahnella sp. WP5 EX31_RS09160 EAL domain-containing protein insig. 34 39
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS21640 GGDEF domain-containing protein insig. 36 40
  Ralstonia solanacearum UW163 UW163_RS17545 GGDEF domain-containing protein insig. 36 40
  Marinobacter adhaerens HP15 HP15_1500 sensory box/GGDEF family protein insig. 33 37
  Rhizobium sp. OAE497 ABIE40_RS16615 EAL domain-containing protein cofit 33 39
  Pectobacterium carotovorum WPP14 HER17_RS16155 SpoIIE family protein phosphatase insig. 39 25
  Pseudomonas syringae pv. syringae B728a Psyr_3843 diguanylate cyclase/phosphodiesterase insig. 31 42
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3843 diguanylate cyclase/phosphodiesterase insig. 31 42
  Lysobacter sp. OAE881 ABIE51_RS13765 EAL domain-containing protein sig. 34 38
  Dickeya dianthicola 67-19 HGI48_RS05410 SpoIIE family protein phosphatase insig. 44 21
  Pseudomonas syringae pv. syringae B728a Psyr_2432 diguanylate cyclase/phosphodiesterase insig. 33 37
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2432 diguanylate cyclase/phosphodiesterase insig. 33 37
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2695.1 GAF domain/GGDEF domain/EAL domain protein insig. 34 37
  Ralstonia sp. UNC404CL21Col ABZR87_RS22185 EAL domain-containing protein insig. 36 39
  Kangiella aquimarina DSM 16071 B158DRAFT_2250 FOG: EAL domain insig. 28 39
  Dickeya dadantii 3937 DDA3937_RS05325 SpoIIE family protein phosphatase insig. 43 21
  Dechlorosoma suillum PS Dsui_3113 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 31 37
  Dickeya dianthicola ME23 DZA65_RS05710 SpoIIE family protein phosphatase insig. 42 21
  Ralstonia solanacearum GMI1000 RS_RS18985 GGDEF domain-containing protein insig. 36 39
  Ralstonia solanacearum PSI07 RPSI07_RS01485 GGDEF domain-containing protein insig. 36 39
  Pseudomonas syringae pv. syringae B728a Psyr_0171 EAL insig. 32 39
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0171 EAL insig. 32 39
  Pseudomonas fluorescens FW300-N2E3 AO353_17145 diguanylate phosphodiesterase insig. 31 37
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3621 FOG: EAL domain sig. 35 38
  Vibrio cholerae E7946 ATCC 55056 CSW01_08600 hypothetical protein insig. 30 37
  Rhodospirillum rubrum S1H Rru_A2934 Putative diguanylate phosphodiesterase (EAL domain) (NCBI) cofit 32 40
  Synechococcus elongatus PCC 7942 Synpcc7942_1158 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) insig. 28 36
  Acidovorax sp. GW101-3H11 Ac3H11_2715 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 35 37
  Ralstonia sp. UNC404CL21Col ABZR87_RS16870 EAL domain-containing protein insig. 36 37
  Klebsiella michiganensis M5al BWI76_RS18710 GGDEF-domain containing protein strong 32 39
  Herbaspirillum seropedicae SmR1 HSERO_RS18680 hypothetical protein insig. 36 22
  Agrobacterium fabrum C58 Atu3244 diguanylate cyclase insig. 33 41
  Mycobacterium tuberculosis H37Rv Rv1354c Conserved hypothetical protein insig. 34 37
  Caulobacter crescentus NA1000 CCNA_03507 GGDEF/EAL phosphodiesterase PdeA cofit 36 35
  Caulobacter crescentus NA1000 Δfur CCNA_03507 GGDEF/EAL phosphodiesterase PdeA cofit 36 35
  Acidovorax sp. GW101-3H11 Ac3H11_448 Sensory box/GGDEF family protein insig. 35 37
  Acidovorax sp. GW101-3H11 Ac3H11_2210 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 33 36
  Rhodopseudomonas palustris CGA009 TX73_002030 EAL domain-containing protein insig. 32 37
  Dechlorosoma suillum PS Dsui_1565 diguanylate cyclase (GGDEF) domain-containing protein cofit 32 36
  Sinorhizobium meliloti 1021 SM_b20447 hypothetical protein insig. 32 36
  Alteromonas macleodii MIT1002 MIT1002_01199 Bacteriophytochrome cph2 insig. 31 36
  Shewanella loihica PV-4 Shew_0979 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 30 39