Homologs of LRK53_RS07075 from Rhodanobacter sp000427505 FW510-R12

helix-hairpin-helix domain-containing protein
KEGG: competence protein ComEA

98 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS07075 helix-hairpin-helix domain-containing protein no data 100 100
o Rhodanobacter denitrificans MT42 LRK55_RS02665 helix-hairpin-helix domain-containing protein no data 84 91
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS02915 helix-hairpin-helix domain-containing protein no data 84 91
o Rhodanobacter sp. FW510-T8 OKGIIK_09895 Competence protein ComEA no data 93 70
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS09315 helix-hairpin-helix domain-containing protein no data 63 78
  Lysobacter sp. OAE881 ABIE51_RS15800 ComEA family DNA-binding protein no data 53 66
  Klebsiella pneumoniae MKP103 KDGMDA_14635 competence protein ComEA insig. 51 69
  Pseudomonas putida KT2440 PP_1813 ComEA-related protein insig. 55 53
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2499 Competence protein ComEA helix-hairpin-helix region precursor insig. 57 51
  Pseudomonas sp. DMC3 GFF4652 putative protein insig. 54 56
  Kangiella aquimarina DSM 16071 B158DRAFT_2332 competence protein ComEA helix-hairpin-helix repeat region insig. 53 53
  Pseudomonas simiae WCS417 PS417_08250 competence protein ComEA sig. 55 53
  Marinobacter adhaerens HP15 HP15_2885 secreted protein containing competence protein ComEA, helix-hairpin-helix region domain insig. 64 50
  Pseudomonas sp. BP01 JOY50_RS15890 ComEA family DNA-binding protein insig. 53 53
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4358 FIG01200701: possible membrane protein insig. 52 55
  Vibrio cholerae E7946 ATCC 55056 CSW01_09590 competence protein ComEA insig. 60 53
  Klebsiella michiganensis M5al BWI76_RS06550 competence protein ComEA insig. 55 50
  Pseudomonas aeruginosa MRSN321 DY961_RS01200 ComEA family DNA-binding protein sig. 53 53
  Pseudomonas aeruginosa PUPa3 DQ20_RS34355 ComEA family DNA-binding protein sig. 53 53
  Pseudomonas fluorescens SBW25 PFLU_RS08195 ComEA family DNA-binding protein no data 53 53
  Pseudomonas fluorescens SBW25-INTG PFLU_RS08195 ComEA family DNA-binding protein no data 53 53
  Pseudomonas orientalis W4I3 QF045_RS10970 ComEA family DNA-binding protein insig. 53 53
  Enterobacter asburiae PDN3 EX28DRAFT_2528 competence protein ComEA helix-hairpin-helix repeat region insig. 50 55
  Escherichia coli BL21 ECD_00394 putative competence-suppressing periplasmic helix-hairpin-helix DNA-binding protein insig. 48 55
  Escherichia fergusonii Becca EFB2_03615 hypothetical protein insig. 48 55
  Pseudomonas stutzeri RCH2 Psest_2957 competence protein ComEA helix-hairpin-helix repeat region insig. 53 51
  Escherichia coli ECOR27 NOLOHH_01240 ybaV Uncharacterized protein YbaV insig. 48 55
  Escherichia coli ECOR38 HEPCGN_06920 ybaV Uncharacterized protein YbaV insig. 48 55
  Escherichia coli ECRC62 BNILDI_22655 ybaV Uncharacterized protein YbaV insig. 48 55
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03231 hypothetical protein insig. 48 55
  Escherichia coli Nissle 1917 ECOLIN_RS02650 helix-hairpin-helix domain-containing protein insig. 48 55
  Escherichia coli BW25113 b0442 ybaV hypothetical protein (NCBI) insig. 48 55
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01780 hypothetical protein no data 60 49
  Pseudomonas aeruginosa PA14 IKLFDK_16000 competence protein ComEA sig. 52 53
  Pseudomonas sp. RS175 PFR28_00933 hypothetical protein insig. 58 49
  Pseudomonas syringae pv. syringae B728a Psyr_3635 Competence protein ComEA helix-hairpin-helix region no data 61 49
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3635 Competence protein ComEA helix-hairpin-helix region insig. 61 49
  Escherichia coli ECRC100 OKFHMN_08305 ybaV Uncharacterized protein YbaV insig. 48 53
  Escherichia coli ECRC101 MCAODC_27530 ybaV Uncharacterized protein YbaV insig. 48 53
  Escherichia coli ECRC102 NIAGMN_06360 ybaV Uncharacterized protein YbaV insig. 48 53
  Escherichia coli ECRC98 JDDGAC_11960 ybaV Uncharacterized protein YbaV insig. 48 53
  Escherichia coli ECRC99 KEDOAH_19660 ybaV Uncharacterized protein YbaV no data 48 53
  Pseudomonas fluorescens FW300-N2E3 AO353_01965 competence protein ComEA sig. 54 49
  Pseudomonas sp. SVBP6 COO64_RS06590 helix-hairpin-helix domain-containing protein insig. 54 49
  Enterobacter sp. TBS_079 MPMX20_01033 hypothetical protein insig. 50 55
  Pseudomonas sp. S08-1 OH686_20920 hypothetical protein cofit 55 51
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_322 nucleotide sugar epimerase/dehydratase WbpM sig. 56 49
  Serratia liquefaciens MT49 IAI46_05035 helix-hairpin-helix domain-containing protein insig. 53 51
  Pseudomonas segetis P6 ACVTMO_RS15340 ComEA family DNA-binding protein no data 48 53
  Pseudomonas fluorescens FW300-N2C3 AO356_03335 competence protein ComEA insig. 54 49
  Dickeya dianthicola 67-19 HGI48_RS05710 helix-hairpin-helix domain-containing protein insig. 48 53
  Dickeya dadantii 3937 DDA3937_RS05665 helix-hairpin-helix domain-containing protein insig. 48 53
  Paraburkholderia sabiae LMG 24235 QEN71_RS22360 helix-hairpin-helix domain-containing protein no data 44 85
  Dickeya dianthicola ME23 DZA65_RS06035 competence protein ComEA insig. 48 53
  Pectobacterium carotovorum WPP14 HER17_RS15825 helix-hairpin-helix domain-containing protein insig. 54 48
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00819 competence protein ComEA insig. 44 85
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1684.1 DNA transport competence protein insig. 55 51
  Erwinia amylovora T8 OLJFJH_17945 AraC family transcriptional regulator insig. 35 72
  Paraburkholderia sabiae LMG 24235 QEN71_RS04130 helix-hairpin-helix domain-containing protein insig. 51 71
  Shewanella loihica PV-4 Shew_2489 helix-hairpin-helix repeat-containing competence protein ComEA (RefSeq) insig. 50 55
  Paraburkholderia graminis OAS925 ABIE53_002035 competence protein ComEA insig. 45 83
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS10565 hypothetical protein no data 47 53
  Pantoea sp. MT58 IAI47_14630 helix-hairpin-helix domain-containing protein insig. 48 48
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03912 competence protein ComEA sig. 49 71
  Burkholderia phytofirmans PsJN BPHYT_RS14850 competence protein ComE no data 51 71
  Acinetobacter baumannii LAC-4 RR41_RS16065 ComEA family DNA-binding protein insig. 43 54
o Methylophilus sp. DMC18 GFF738 hypothetical protein insig. 37 89
  Paraburkholderia graminis OAS925 ABIE53_003145 competence protein ComEA insig. 49 71
  Erwinia tracheiphila SCR3 LU632_RS18320 helix-hairpin-helix domain-containing protein insig. 49 58
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS13820 competence protein ComEA no data 36 91
o Ralstonia solanacearum UW163 UW163_RS15990 competence protein ComEA insig. 36 91
  Burkholderia phytofirmans PsJN BPHYT_RS09000 competence protein ComE insig. 47 64
  Shewanella oneidensis MR-1 SO1813 DNA-binding protein, putative (NCBI ptt file) insig. 49 56
  Acinetobacter radioresistens SK82 MPMX26_00542 hypothetical protein no data 35 61
  Shewanella sp. ANA-3 Shewana3_2642 helix-hairpin-helix repeat-containing competence protein ComEA (RefSeq) insig. 48 53
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_16465 Competence protein ComEA cofit 47 58
  Cupriavidus basilensis FW507-4G11 RR42_RS04525 hypothetical protein no data 46 75
  Rahnella sp. WP5 EX31_RS22270 competence protein ComEA insig. 46 49
  Ralstonia solanacearum GMI1000 RS_RS04555 competence protein ComEA insig. 34 91
  Ralstonia solanacearum PSI07 RPSI07_RS19650 competence protein ComEA strong 34 91
  Shewanella amazonensis SB2B Sama_1243 DNA uptake protein-related DNA-binding protein (RefSeq) sig. 42 49
  Mycobacterium tuberculosis H37Rv Rv2415c Conserved hypothetical protein insig. 51 37
  Ralstonia sp. UNC404CL21Col ABZR87_RS09510 helix-hairpin-helix domain-containing protein insig. 43 47
  Bifidobacterium breve UCC2003 BBR_RS16270 competence protein ComEA insig. 37 51
  Synechocystis sp000284455 PCC 6803 SGL_RS14595 phospholipase D-like domain-containing protein insig. 42 59
  Alteromonas macleodii MIT1002 MIT1002_00982 ComE operon protein 1 insig. 36 47
  Herbaspirillum seropedicae SmR1 HSERO_RS18380 transporter insig. 41 62
  Pseudomonas aeruginosa MRSN321 DY961_RS11875 Tex family protein sig. 40 50
  Pseudomonas aeruginosa PA14 IKLFDK_27470 RNA-binding transcriptional accessory protein sig. 40 50
  Pseudomonas aeruginosa PUPa3 DQ20_RS50240 Tex family protein sig. 40 50
  Pseudomonas segetis P6 ACVTMO_RS03815 Tex family protein sig. 40 50
  Rhodopseudomonas palustris CGA009 TX73_003025 Tex family protein insig. 40 57
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02750 RNA-binding transcriptional accessory protein insig. 36 50
  Pseudomonas stutzeri RCH2 Psest_3996 Transcriptional accessory protein strong 38 50
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2426.1 Transcription accessory protein (S1 RNA-binding domain) insig. 36 57
  Pseudomonas sp. S08-1 OH686_11100 Transcription accessory protein (S1 RNA-binding domain) cofit 38 50
  Desulfovibrio vulgaris Hildenborough JW710 DVU2246 S1 RNA binding domain protein (TIGR) insig. 40 47
  Acidovorax sp. GW101-3H11 Ac3H11_2501 Transcription accessory protein (S1 RNA-binding domain) no data 36 48