Homologs of HMPREF1078_RS13185 from Parabacteroides merdae CL09T00C40

cytochrome c biogenesis protein CcdA
SEED: Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13185 cytochrome c biogenesis protein CcdA strong 100 100
o Bacteroides stercoris CC31F HMPREF1181_RS04920 thioredoxin family protein no data 60 100
o Bacteroides thetaiotaomicron VPI-5482 BT0186 thiol:disulfide interchange protein dsbD precursor (NCBI ptt file) no data 61 100
o Bacteroides ovatus ATCC 8483 BACOVA_01253 cytochrome C biogenesis protein transmembrane region no data 60 99
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14925 thioredoxin family protein no data 59 99
o Phocaeicola dorei CL03T12C01 ABI39_RS10645 thioredoxin family protein no data 59 99
  Bacteroides ovatus ATCC 8483 BACOVA_00294 cytochrome C biogenesis protein transmembrane region insig. 57 97
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_14340 disulfide bond formation protein DsbD no data 42 97
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS13750 hypothetical protein strong 58 64
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1202 Thiol:disulfide interchange protein no data 41 99
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20985 hypothetical protein no data 48 76
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20150 protein-disulfide reductase DsbD no data 51 65
  Shewanella oneidensis MR-1 SO0696 dsbD thiol:disulfide interchange protein DsbD (NCBI ptt file) strong 25 73
  Shewanella sp. ANA-3 Shewana3_3576 dipZ thiol:disulfide interchange protein precursor (RefSeq) strong 24 73
  Kangiella aquimarina DSM 16071 B158DRAFT_0153 Thiol:disulfide interchange protein strong 27 55
o Shewanella loihica PV-4 Shew_3266 dipZ thiol:disulfide interchange protein precursor (RefSeq) strong 23 80
  Lysobacter sp. OAE881 ABIE51_RS17705 protein-disulfide reductase DsbD strong 25 71
  Shewanella amazonensis SB2B Sama_0538 dipZ thiol:disulfide interchange protein precursor (RefSeq) strong 25 72
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20155 protein-disulfide reductase DsbD N-terminal domain-containing protein no data 39 21
  Marinobacter adhaerens HP15 HP15_2101 membrane protein containing cytochrome c assembly protein, transmembrane region domain strong 27 53
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS13745 sugar transporter strong 37 21
  Ralstonia solanacearum PSI07 RPSI07_RS10195 protein-disulfide reductase DsbD insig. 24 54
  Alteromonas macleodii MIT1002 MIT1002_03939 Thiol:disulfide interchange protein DsbD precursor no data 28 55
  Ralstonia solanacearum GMI1000 RS_RS14985 thiol:disulfide interchange protein DsbD no data 24 57
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20990 sugar transporter insig. 39 21
  Pseudomonas stutzeri RCH2 Psest_1022 Thiol:disulfide interchange protein strong 28 60
  Vibrio cholerae E7946 ATCC 55056 CSW01_13635 thiol:disulfide interchange protein DsbD strong 27 66
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS07045 protein-disulfide reductase DsbD strong 25 57
  Ralstonia solanacearum UW163 UW163_RS06570 protein-disulfide reductase DsbD insig. 25 57
  Ralstonia sp. UNC404CL21Col ABZR87_RS02695 protein-disulfide reductase DsbD no data 27 54
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2016 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) strong 28 54
  Enterobacter sp. TBS_079 MPMX20_02340 Thiol:disulfide interchange protein DsbD insig. 27 52
  Pseudomonas putida KT2440 PP_0561 thiol/disulfide interchange protein 1 insig. 29 51
  Klebsiella michiganensis M5al BWI76_RS02315 protein-disulfide reductase DsbD insig. 27 54
  Cupriavidus basilensis FW507-4G11 RR42_RS19110 thiol:disulfide interchange protein no data 25 54
  Enterobacter asburiae PDN3 EX28DRAFT_1132 Thiol:disulfide interchange protein insig. 27 54
  Acinetobacter radioresistens SK82 MPMX26_03164 Thiol:disulfide interchange protein DsbD strong 25 68
  Pectobacterium carotovorum WPP14 HER17_RS18850 protein-disulfide reductase DsbD cofit 25 55
  Pseudomonas syringae pv. syringae B728a Psyr_4398 Protein-disulfide reductase no data 27 56
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4398 Protein-disulfide reductase no data 27 56
  Herbaspirillum seropedicae SmR1 HSERO_RS00715 thiol:disulfide interchange protein no data 25 49
  Enterobacter sp. TBS_079 MPMX20_00416 Thiol:disulfide interchange protein DsbD sig. 25 50
  Pseudomonas fluorescens FW300-N2E3 AO353_13690 thiol:disulfide interchange protein sig. 28 56
  Acinetobacter radioresistens SK82 MPMX26_01995 Thiol:disulfide interchange protein DsbD insig. 25 48
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05598 thiol:disulfide interchange protein DsbD no data 24 56
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2398 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) no data 23 71
  Enterobacter asburiae PDN3 EX28DRAFT_3333 Thiol:disulfide interchange protein insig. 26 50
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_210 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) insig. 25 71
  Pseudomonas fluorescens FW300-N2C3 AO356_02870 thiol:disulfide interchange protein no data 23 71
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3291 Membrane protein, suppressor for copper-sensitivity ScsB insig. 27 45
  Dechlorosoma suillum PS Dsui_0718 thiol:disulfide interchange protein no data 32 33
  Escherichia coli BW25113 b4136 dipZ thiol:disulfide interchange protein precursor (NCBI) insig. 25 54
  Castellaniella sp019104865 MT123 ABCV34_RS03205 protein-disulfide reductase DsbD cofit 24 58
  Escherichia fergusonii Becca EFB2_04399 Thiol:disulfide interchange protein DsbD insig. 26 50
  Escherichia coli ECRC62 BNILDI_06775 dsbD protein-disulfide reductase DsbD insig. 25 54
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1306 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) sig. 26 67
  Escherichia coli Nissle 1917 ECOLIN_RS24030 protein-disulfide reductase DsbD cofit 25 50
  Rahnella sp. WP5 EX31_RS08975 protein-disulfide reductase DsbD insig. 25 59
  Escherichia coli BL21 ECD_04006 thiol:disulfide interchange protein and activator of DsbC insig. 25 54
  Escherichia coli ECOR27 NOLOHH_04715 dsbD protein-disulfide reductase DsbD cofit 25 54
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03907 Thiol:disulfide interchange protein DsbD cofit 25 54
  Escherichia coli ECOR38 HEPCGN_10675 dsbD protein-disulfide reductase DsbD cofit 24 54
  Serratia liquefaciens MT49 IAI46_01465 protein-disulfide reductase DsbD insig. 24 54
  Escherichia coli ECRC101 OKFHMN_12450 dsbD protein-disulfide reductase DsbD insig. 24 54
  Escherichia coli ECRC102 NIAGMN_10295 dsbD protein-disulfide reductase DsbD insig. 24 54
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2298 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) insig. 25 56
  Escherichia coli ECRC98 JDDGAC_16085 dsbD protein-disulfide reductase DsbD no data 24 54
  Escherichia coli ECRC99 KEDOAH_15715 dsbD protein-disulfide reductase DsbD no data 24 54
  Pseudomonas sp. RS175 PFR28_01029 Thiol:disulfide interchange protein DsbD no data 23 70
  Escherichia coli ECRC101 MCAODC_02960 dsbD protein-disulfide reductase DsbD insig. 24 54
  Pseudomonas stutzeri RCH2 Psest_1603 Thiol:disulfide interchange protein insig. 26 50
  Dinoroseobacter shibae DFL-12 Dshi_3407 putative suppressor for copper-sensitivity B precursor (RefSeq) strong 26 41
  Pseudomonas fluorescens GW456-L13 PfGW456L13_49 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) insig. 31 33
  Burkholderia phytofirmans PsJN BPHYT_RS17970 thiol:disulfide interchange protein no data 23 51
  Dinoroseobacter shibae DFL-12 Dshi_3779 thiol:disulfide interchange protein DsbD 1 precursor (RefSeq) no data 31 32
  Dinoroseobacter shibae DFL-12 Dshi_4055 thiol:disulfide interchange protein DsbD 1 precursor (RefSeq) no data 31 32
  Pseudomonas simiae WCS417 PS417_19525 thiol:disulfide interchange protein no data 24 56
  Paraburkholderia graminis OAS925 ABIE53_000167 thiol:disulfide interchange protein DsbD insig. 23 49
o Paraburkholderia sabiae LMG 24235 QEN71_RS28120 protein-disulfide reductase DsbD no data 23 55
  Dickeya dianthicola ME23 DZA65_RS02835 protein-disulfide reductase DsbD cofit 24 50
  Klebsiella michiganensis M5al BWI76_RS10440 protein-disulfide reductase insig. 23 68
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS11500 protein-disulfide reductase DsbD insig. 27 33
  Dickeya dianthicola 67-19 HGI48_RS02680 protein-disulfide reductase DsbD insig. 24 50
  Pseudomonas sp. S08-1 OH686_07580 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase no data 25 57
  Pseudomonas fluorescens SBW25 PFLU_RS21490 protein-disulfide reductase DsbD no data 23 56
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21490 protein-disulfide reductase DsbD no data 23 56
  Azospirillum sp. SherDot2 MPMX19_01078 Thiol:disulfide interchange protein DsbD no data 26 31
  Dickeya dadantii 3937 DDA3937_RS02705 protein-disulfide reductase DsbD sig. 25 50
  Pseudomonas fluorescens FW300-N2E3 AO353_19365 thiol:disulfide interchange protein strong 25 56
  Erwinia tracheiphila SCR3 LU632_RS01840 protein-disulfide reductase DsbD insig. 25 57
  Pantoea sp. MT58 IAI47_17335 protein-disulfide reductase DsbD insig. 24 51
  Shewanella amazonensis SB2B Sama_2713 thiol:disulfide interchange protein (RefSeq) insig. 28 29
  Serratia liquefaciens MT49 IAI46_17920 thioredoxin family protein insig. 21 63
  Rhodospirillum rubrum S1H Rru_A3058 putative suppressor for copper-sensitivity B precursor (NCBI) no data 27 33
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS17095 protein-disulfide reductase DsbD strong 26 27
  Desulfovibrio vulgaris Hildenborough JW710 DVU0999 thio:disulfide interchange protein, putative (TIGR) insig. 23 47
  Desulfovibrio vulgaris Miyazaki F DvMF_3036 cytochrome c biogenesis protein transmembrane region (RefSeq) strong 22 49
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.682.1 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) no data 26 27
  Azospirillum brasilense Sp245 AZOBR_RS10520 copper-resistance protein no data 25 28
  Magnetospirillum magneticum AMB-1 AMB_RS17105 thiol:disulfide interchange protein DsbD no data 26 31