Homologs of HMPREF1078_RS00200 from Parabacteroides merdae CL09T00C40

Holliday junction resolvase RuvX
SEED: Putative Holliday junction resolvase YqgF
KEGG: putative holliday junction resolvase

85 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00200 Holliday junction resolvase RuvX insig. 100 100
o Bacteroides stercoris CC31F HMPREF1181_RS04285 Holliday junction resolvase RuvX no data 71 99
o Bacteroides ovatus ATCC 8483 BACOVA_01773 Holliday junction resolvase-like protein no data 69 99
o Bacteroides thetaiotaomicron VPI-5482 BT0419 putative endonuclease (NCBI ptt file) no data 69 99
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS07050 Holliday junction resolvase RuvX no data 71 99
o Phocaeicola dorei CL03T12C01 ABI39_RS20940 Holliday junction resolvase RuvX no data 70 99
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS22055 Holliday junction resolvase RuvX no data 54 96
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_18175 Holliday junction resolvase RuvX no data 55 97
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20370 Holliday junction resolvase RuvX no data 50 98
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1885 RNAse H-fold protein YqgF no data 46 96
o Synechococcus elongatus PCC 7942 Synpcc7942_2398 Holliday junction resolvase-like protein strong 31 95
o Fusobacterium nucleatum SB010 HUW76_04355 Holliday junction resolvase RuvX no data 30 100
o Magnetospirillum magneticum AMB-1 AMB_RS08015 Holliday junction resolvase RuvX no data 29 96
o Phaeobacter inhibens DSM 17395 PGA1_c19190 RNAse H-fold protein YqgF no data 26 96
o Desulfovibrio vulgaris Hildenborough JW710 DVU3070 conserved hypothetical protein (TIGR) no data 34 94
  Bosea sp. OAE506 ABIE41_RS17195 Holliday junction resolvase RuvX no data 29 95
o Rhizobium sp. OAE497 ABIE40_RS07415 Holliday junction resolvase RuvX no data 29 94
o Mycobacterium tuberculosis H37Rv Rv2554c Conserved protein no data 28 96
o Caulobacter crescentus NA1000 CCNA_02521 endonuclease involved in recombination no data 30 94
o Caulobacter crescentus NA1000 Δfur CCNA_02521 endonuclease involved in recombination cofit 30 94
o Agrobacterium fabrum C58 Atu1316 hypothetical protein no data 28 94
  Sinorhizobium meliloti 1021 SMc01355 Holliday junction resolvase-like protein no data 26 94
o Dinoroseobacter shibae DFL-12 Dshi_1064 Holliday junction resolvase YqgF (RefSeq) no data 27 94
o Paraburkholderia sabiae LMG 24235 QEN71_RS25790 Holliday junction resolvase RuvX no data 31 94
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04270 Holliday junction resolvase RuvX no data 27 96
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04815 putative holliday junction resolvase no data 31 94
o Ralstonia sp. UNC404CL21Col ABZR87_RS08615 Holliday junction resolvase RuvX no data 27 95
o Bifidobacterium breve UCC2003 BBR_RS15065 Holliday junction resolvase RuvX no data 28 96
o Desulfovibrio vulgaris Miyazaki F DvMF_2352 Holliday junction resolvase YqgF (RefSeq) no data 36 92
o Rhodopseudomonas palustris CGA009 TX73_016100 Holliday junction resolvase RuvX no data 26 95
  Rahnella sp. WP5 EX31_RS02675 Holliday junction resolvase RuvX no data 30 97
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS12615 Holliday junction resolvase RuvX no data 27 97
  Pseudomonas putida KT2440 PP_4996 Putative Holliday junction resolvase no data 31 94
o Shewanella amazonensis SB2B Sama_2473 Holliday junction resolvase-like protein (RefSeq) no data 28 97
  Erwinia tracheiphila SCR3 LU632_RS05470 ruvX Holliday junction resolvase RuvX no data 31 94
  Paraburkholderia graminis OAS925 ABIE53_001129 putative Holliday junction resolvase no data 31 94
  Pectobacterium carotovorum WPP14 HER17_RS02625 Holliday junction resolvase RuvX no data 30 95
  Ralstonia solanacearum UW163 UW163_RS00950 Holliday junction resolvase RuvX no data 27 97
  Cupriavidus basilensis FW507-4G11 RR42_RS15870 Holliday junction DNA helicase no data 28 95
  Azospirillum sp. SherDot2 MPMX19_01571 Putative pre-16S rRNA nuclease no data 28 94
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0078 RNAse H-fold protein YqgF no data 27 95
  Ralstonia solanacearum GMI1000 RS_RS03400 Holliday junction resolvase RuvX no data 27 95
  Azospirillum brasilense Sp245 AZOBR_RS20625 Holliday junction resolvase insig. 27 94
  Enterobacter sp. TBS_079 MPMX20_03807 Putative pre-16S rRNA nuclease no data 29 95
  Dechlorosoma suillum PS Dsui_0594 RNAse H-fold protein YqgF no data 28 96
  Ralstonia solanacearum PSI07 RPSI07_RS20645 Holliday junction resolvase RuvX no data 26 96
  Burkholderia phytofirmans PsJN BPHYT_RS04225 Holliday junction resolvase no data 33 94
  Escherichia fergusonii Becca EFB2_00953 Putative pre-16S rRNA nuclease no data 28 96
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00769 Putative pre-16S rRNA nuclease no data 28 96
  Escherichia coli Nissle 1917 ECOLIN_RS16405 Holliday junction resolvase RuvX no data 28 96
  Escherichia coli BW25113 b2949 yqgF Holliday junction resolvase-like protein (NCBI) no data 28 96
  Escherichia coli BL21 ECD_02779 putative Holliday junction resolvase no data 28 96
  Escherichia coli ECOR27 NOLOHH_11135 ruvX Holliday junction resolvase RuvX no data 28 96
  Escherichia coli ECOR38 HEPCGN_18570 ruvX Holliday junction resolvase RuvX no data 28 96
  Escherichia coli ECRC62 BNILDI_09715 ruvX Holliday junction resolvase RuvX no data 28 96
  Enterobacter asburiae PDN3 EX28DRAFT_2987 RNAse H-fold protein YqgF no data 28 95
  Pseudomonas fluorescens SBW25 PFLU_RS28335 Holliday junction resolvase RuvX no data 29 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28335 Holliday junction resolvase RuvX no data 29 94
  Serratia liquefaciens MT49 IAI46_21400 Holliday junction resolvase RuvX no data 28 95
  Escherichia coli ECRC100 OKFHMN_19265 ruvX Holliday junction resolvase RuvX no data 28 96
  Escherichia coli ECRC101 MCAODC_09785 ruvX Holliday junction resolvase RuvX no data 28 96
  Escherichia coli ECRC102 NIAGMN_17030 ruvX Holliday junction resolvase RuvX no data 28 96
  Escherichia coli ECRC98 JDDGAC_22895 ruvX Holliday junction resolvase RuvX no data 28 96
  Escherichia coli ECRC99 KEDOAH_08875 ruvX Holliday junction resolvase RuvX no data 28 96
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1018 Putative Holliday junction resolvase YggF no data 28 94
  Dickeya dianthicola 67-19 HGI48_RS18505 Holliday junction resolvase RuvX no data 28 95
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3051 Putative Holliday junction resolvase YggF no data 28 96
  Pseudomonas simiae WCS417 PS417_26690 Holliday junction resolvase no data 28 94
  Alteromonas macleodii MIT1002 MIT1002_03057 Putative Holliday junction resolvase no data 29 95
  Dickeya dianthicola ME23 DZA65_RS19640 Holliday junction resolvase RuvX no data 27 95
  Pseudomonas syringae pv. syringae B728a Psyr_0484 Conserved hypothetical protein 250 no data 30 94
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0484 Conserved hypothetical protein 250 no data 30 94
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2349 Putative Holliday junction resolvase YggF no data 28 94
  Pseudomonas sp. RS175 PFR28_04235 Putative pre-16S rRNA nuclease no data 28 94
  Kangiella aquimarina DSM 16071 B158DRAFT_0192 RNAse H-fold protein YqgF no data 27 95
  Shewanella oneidensis MR-1 SO3347 conserved hypothetical protein TIGR00250 (NCBI ptt file) no data 28 94
  Pantoea sp. MT58 IAI47_03605 Holliday junction resolvase RuvX no data 30 94
  Dickeya dadantii 3937 DDA3937_RS18570 Holliday junction resolvase RuvX no data 28 95
  Pseudomonas fluorescens FW300-N2C3 AO356_13460 Holliday junction resolvase no data 28 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4608 Putative Holliday junction resolvase YggF no data 28 94
  Shewanella sp. ANA-3 Shewana3_1199 Holliday junction resolvase-like protein (RefSeq) no data 27 94
  Pseudomonas fluorescens FW300-N2E3 AO353_08125 Holliday junction resolvase no data 28 94
  Shewanella loihica PV-4 Shew_1143 Holliday junction resolvase-like protein (RefSeq) no data 25 94
  Klebsiella michiganensis M5al BWI76_RS24085 Holliday junction resolvase RuvX no data 26 95
  Rhodospirillum rubrum S1H Rru_A3178 Holliday junction resolvase YqgF (NCBI) no data 22 97