Homologs of PS417_04675 from Pseudomonas simiae WCS417

deoxyribonuclease
SEED: GGDEF domain protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_04675 deoxyribonuclease sig. 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS04750 GGDEF domain-containing protein insig. 88 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS04750 GGDEF domain-containing protein insig. 88 99
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01138 hypothetical protein cofit 87 96
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1660 GGDEF domain protein insig. 61 96
o Pseudomonas fluorescens FW300-N2E3 AO353_15375 deoxyribonuclease strong 62 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_936 GGDEF domain protein cofit 61 95
o Pseudomonas sp. RS175 PFR28_03580 hypothetical protein insig. 62 97
o Pseudomonas sp. DMC3 GFF4411 hypothetical protein insig. 59 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5364 GGDEF domain protein insig. 62 98
o Pseudomonas fluorescens FW300-N2C3 AO356_17195 deoxyribonuclease sig. 62 98
o Pseudomonas syringae pv. syringae B728a Psyr_1125 GGDEF domain protein insig. 53 96
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1125 GGDEF domain protein insig. 53 96
o Pseudomonas sp. SVBP6 COO64_RS11300 sensor domain-containing diguanylate cyclase insig. 54 96
o Pseudomonas putida KT2440 PP_0798 GGDEF domain protein insig. 53 98
o Pseudomonas sp. BP01 JOY50_RS19290 GGDEF domain-containing protein insig. 52 98
o Rhodospirillum rubrum S1H Rru_A0985 Putative diguanylate cyclase (GGDEF domain) (NCBI) insig. 46 96
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02129 diguanylate cyclase (GGDEF) domain-containing protein insig. 40 99
o Paraburkholderia graminis OAS925 ABIE53_004409 diguanylate cyclase (GGDEF)-like protein sig. 39 95
o Ralstonia sp. UNC404CL21Col ABZR87_RS23605 sensor domain-containing diguanylate cyclase no data 40 94
o Burkholderia phytofirmans PsJN BPHYT_RS01980 diguanylate cyclase insig. 40 97
  Paraburkholderia graminis OAS925 ABIE53_000542 diguanylate cyclase (GGDEF)-like protein insig. 39 96
o Ralstonia solanacearum PSI07 RPSI07_RS07115 GGDEF domain-containing protein insig. 39 96
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01602 diguanylate cyclase (GGDEF) domain-containing protein insig. 39 98
  Ralstonia sp. UNC404CL21Col ABZR87_RS17590 sensor domain-containing diguanylate cyclase insig. 38 97
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS16595 sensor domain-containing diguanylate cyclase insig. 38 97
o Ralstonia solanacearum UW163 UW163_RS17950 sensor domain-containing diguanylate cyclase insig. 38 97
o Ralstonia solanacearum GMI1000 RS_RS24470 GGDEF domain-containing protein insig. 38 97
o Paraburkholderia sabiae LMG 24235 QEN71_RS43240 sensor domain-containing diguanylate cyclase insig. 39 93
  Paraburkholderia sabiae LMG 24235 QEN71_RS32265 diguanylate cyclase insig. 37 95
  Burkholderia phytofirmans PsJN BPHYT_RS25280 diguanylate cyclase insig. 37 97
  Paraburkholderia graminis OAS925 ABIE53_004284 diguanylate cyclase (GGDEF)-like protein insig. 38 92
  Ralstonia solanacearum GMI1000 RS_RS19075 sensor domain-containing diguanylate cyclase insig. 40 90
  Ralstonia solanacearum PSI07 RPSI07_RS01585 GGDEF domain-containing protein insig. 38 95
  Ralstonia solanacearum GMI1000 RS_RS19085 GGDEF domain-containing protein insig. 38 97
  Ralstonia solanacearum UW163 UW163_RS17650 GGDEF domain-containing protein insig. 37 95
  Ralstonia solanacearum PSI07 RPSI07_RS01600 GGDEF domain-containing protein insig. 38 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS28550 diguanylate cyclase insig. 37 96
o Xanthobacter sp. DMC5 GFF2622 hypothetical protein insig. 38 91
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01777 diguanylate cyclase insig. 38 94
  Ralstonia sp. UNC404CL21Col ABZR87_RS08355 GGDEF domain-containing protein insig. 38 95
  Burkholderia phytofirmans PsJN BPHYT_RS27385 DeoR family transcriptional regulator insig. 37 95
o Herbaspirillum seropedicae SmR1 HSERO_RS23180 membrane protein sig. 34 95
o Rhodopseudomonas palustris CGA009 TX73_004565 diguanylate cyclase insig. 34 98
  Herbaspirillum seropedicae SmR1 HSERO_RS20205 membrane protein insig. 35 97
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3834 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 35 99
  Xanthobacter sp. DMC5 GFF713 hypothetical protein insig. 36 95
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5815 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 33 99
  Pseudomonas fluorescens FW300-N2E3 AO353_28530 diguanylate cyclase insig. 37 77
  Pseudomonas sp. DMC3 GFF2800 hypothetical protein insig. 37 80
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_40 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 35 76
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3970 Two-component response regulator insig. 34 77
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1740.1 response regulator insig. 33 91
  Pseudomonas sp. SVBP6 COO64_RS08975 diguanylate cyclase cofit 37 78
  Pseudomonas sp. RS175 PFR28_01205 hypothetical protein insig. 35 77
  Pseudomonas sp. DMC3 GFF1185 hypothetical protein cofit 33 94
  Pseudomonas sp. DMC3 GFF1350 hypothetical protein insig. 30 98
  Pseudomonas fluorescens FW300-N2C3 AO356_01855 diguanylate cyclase insig. 35 72
  Pseudomonas syringae pv. syringae B728a Psyr_3328 GGDEF domain protein insig. 34 83
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3328 GGDEF domain protein insig. 34 83
  Herbaspirillum seropedicae SmR1 HSERO_RS17710 response regulator insig. 37 79
o Pseudomonas sp. S08-1 OH686_18335 hypothetical protein insig. 33 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2239 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 34 77
  Herbaspirillum seropedicae SmR1 HSERO_RS22490 diguanylate cyclase sig. 32 93
o Serratia liquefaciens MT49 IAI46_16330 diguanylate cyclase insig. 31 94
  Variovorax sp. OAS795 ABID97_RS28160 sensor domain-containing diguanylate cyclase insig. 35 77
  Pseudomonas fluorescens FW300-N2E3 AO353_22495 diguanylate cyclase insig. 36 77
  Pseudomonas sp. RS175 PFR28_01649 hypothetical protein insig. 32 95
  Variovorax sp. SCN45 GFF4645 GGDEF domain protein insig. 37 77
  Pseudomonas fluorescens FW300-N2C3 AO356_25285 diguanylate cyclase insig. 33 95
  Pseudomonas fluorescens FW300-N2E3 AO353_20465 diguanylate cyclase cofit 34 77
  Pseudomonas sp. SVBP6 COO64_RS23080 sensor domain-containing diguanylate cyclase insig. 32 91
o Enterobacter sp. TBS_079 MPMX20_01827 hypothetical protein cofit 29 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1357 PUTATIVE TRANSMEMBRANE PROTEIN insig. 33 92
  Pseudomonas syringae pv. syringae B728a Psyr_2281 GGDEF domain protein insig. 32 94
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2281 GGDEF domain protein insig. 32 94
  Pseudomonas putida KT2440 PP_3242 GGDEF domain protein insig. 31 95
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4717.1 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 29 90
o Enterobacter asburiae PDN3 EX28DRAFT_1789 diguanylate cyclase (GGDEF) domain insig. 29 94
  Pseudomonas sp. BP01 JOY50_RS26570 sensor domain-containing diguanylate cyclase no data 30 95
  Herbaspirillum seropedicae SmR1 HSERO_RS07715 diguanylate cyclase insig. 30 90
o Azospirillum sp. SherDot2 MPMX19_01436 hypothetical protein insig. 32 83
o Pseudomonas stutzeri RCH2 Psest_0664 diguanylate cyclase (GGDEF) domain insig. 30 90
  Pectobacterium carotovorum WPP14 HER17_RS06510 sensor domain-containing diguanylate cyclase insig. 30 77
  Acidovorax sp. GW101-3H11 Ac3H11_1624 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) strong 34 61
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS12495 GGDEF domain-containing protein cofit 31 76
  Dechlorosoma suillum PS Dsui_2893 diguanylate cyclase (GGDEF) domain-containing protein cofit 33 75
  Pseudomonas syringae pv. syringae B728a Psyr_1309 response regulator receiver modulated diguanylate cyclase insig. 45 37
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1309 response regulator receiver modulated diguanylate cyclase insig. 45 37
  Shewanella loihica PV-4 Shew_3381 diguanylate cyclase (RefSeq) strong 46 35
  Synechococcus elongatus PCC 7942 Synpcc7942_2096 diguanylate cyclase with GAF sensor insig. 48 34
  Pseudomonas sp. BP01 JOY50_RS11815 wspR Wsp signal transduction system regulator diguanylate cyclase WspR insig. 46 37
  Shewanella amazonensis SB2B Sama_3210 GGDEF domain-containing protein (RefSeq) strong 45 35
  Dickeya dianthicola 67-19 HGI48_RS08030 GGDEF domain-containing protein insig. 29 76
  Azospirillum sp. SherDot2 MPMX19_02025 Protein-glutamate methylesterase/protein-glutamine glutaminase insig. 45 35
  Pseudomonas fluorescens FW300-N2C3 AO356_06245 diguanylate cyclase insig. 51 33
  Pseudomonas sp. SVBP6 COO64_RS05065 PleD family two-component system response regulator insig. 45 37
  Desulfovibrio vulgaris Hildenborough JW710 DVU1805 GGDEF domain protein (TIGR) insig. 52 33
  Pseudomonas sp. RS175 PFR28_00357 Protein-glutamate methylesterase/protein-glutamine glutaminase insig. 51 33
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3117 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 51 33