Homologs of GFF741 from Xanthobacter sp. DMC5

putative cyclic di-GMP phosphodiesterase PdeB
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF741 putative cyclic di-GMP phosphodiesterase PdeB insig. 100 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4919.1 FIG01210508: hypothetical protein insig. 39 100
o Rhizobium sp. OAE497 ABIE40_RS05110 EAL domain-containing protein insig. 41 99
o Sphingobium sp. HT1-2 GFF2536 hypothetical protein insig. 40 99
o Enterobacter sp. TBS_079 MPMX20_01055 putative cyclic di-GMP phosphodiesterase PdeB insig. 37 99
o Herbaspirillum seropedicae SmR1 HSERO_RS18635 signal transduction protein insig. 40 88
o Enterobacter asburiae PDN3 EX28DRAFT_2505 Predicted signal transduction protein containing sensor and EAL domains cofit 36 99
o Pseudomonas sp. BP01 JOY50_RS21070 EAL domain-containing protein insig. 36 95
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4372 Uncharacterized protein ylaB insig. 34 100
o Pseudomonas putida KT2440 PP_0131 putative membrane-anchored phosphodiesterase sig. 36 95
o Escherichia coli Nissle 1917 ECOLIN_RS02725 cyclic-guanylate-specific phosphodiesterase PdeB insig. 33 98
o Escherichia coli ECOR38 HEPCGN_06845 pdeB cyclic-guanylate-specific phosphodiesterase PdeB insig. 33 98
o Escherichia fergusonii Becca EFB2_03601 putative cyclic di-GMP phosphodiesterase PdeB insig. 33 98
o Escherichia coli ECOR27 NOLOHH_01165 pdeB cyclic-guanylate-specific phosphodiesterase PdeB cofit 33 98
o Escherichia coli ECRC62 BNILDI_22580 pdeB cyclic-guanylate-specific phosphodiesterase PdeB cofit 33 98
o Escherichia coli BW25113 b0457 ylaB orf, hypothetical protein (VIMSS) insig. 33 98
o Escherichia coli ECRC100 OKFHMN_08230 pdeB cyclic-guanylate-specific phosphodiesterase PdeB cofit 32 98
o Escherichia coli ECRC101 MCAODC_27455 pdeB cyclic-guanylate-specific phosphodiesterase PdeB insig. 32 98
o Escherichia coli ECRC102 NIAGMN_06285 pdeB cyclic-guanylate-specific phosphodiesterase PdeB cofit 32 98
o Escherichia coli ECRC99 KEDOAH_19735 pdeB cyclic-guanylate-specific phosphodiesterase PdeB no data 32 98
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03217 putative cyclic di-GMP phosphodiesterase PdeB insig. 33 98
o Pseudomonas sp. RS175 PFR28_04632 putative cyclic di-GMP phosphodiesterase PdeB insig. 34 94
o Escherichia coli ECRC98 JDDGAC_11885 pdeB cyclic-guanylate-specific phosphodiesterase PdeB insig. 32 98
o Escherichia coli BL21 ECD_00408 putative membrane-anchored cyclic-di-GMP phosphodiesterase sig. 32 98
o Pseudomonas fluorescens GW456-L13 PfGW456L13_586 Rtn protein insig. 34 98
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1883 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 46 60
o Pseudomonas sp. DMC3 GFF623 putative cyclic di-GMP phosphodiesterase PdeB cofit 34 99
  Pseudomonas sp. SVBP6 COO64_RS02515 EAL domain-containing protein insig. 45 61
o Pseudomonas fluorescens FW300-N2E3 AO353_10970 diguanylate phosphodiesterase insig. 46 56
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4154 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 46 56
  Pseudomonas fluorescens FW300-N2C3 AO356_11425 diguanylate phosphodiesterase insig. 47 55
  Enterobacter sp. TBS_079 MPMX20_00280 putative cyclic di-GMP phosphodiesterase PdeC cofit 32 98
  Escherichia coli BL21 ECD_03933 putative membrane-anchored cyclic-di-GMP phosphodiesterase insig. 32 98
  Escherichia coli ECOR38 HEPCGN_11495 pdeC c-di-GMP phosphodiesterase PdeC insig. 32 98
  Escherichia coli BW25113 b4061 yjcC predicted signal transduction protein (EAL domain containing protein) (NCBI) insig. 32 98
o Acidovorax sp. GW101-3H11 Ac3H11_3798 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 32 100
o Klebsiella michiganensis M5al BWI76_RS01990 cyclic diguanylate phosphodiesterase sig. 31 96
  Enterobacter asburiae PDN3 EX28DRAFT_4243 Predicted signal transduction protein containing sensor and EAL domains insig. 32 98
  Escherichia coli Nissle 1917 ECOLIN_RS23500 c-di-GMP phosphodiesterase PdeC insig. 32 98
o Klebsiella pneumoniae MKP103 KDGMDA_14745 putative cyclic di-GMP phosphodiesterase PdeB insig. 33 99
  Escherichia fergusonii Becca EFB2_04530 putative cyclic di-GMP phosphodiesterase PdeC insig. 32 98
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03980 putative cyclic di-GMP phosphodiesterase PdeC insig. 32 98
  Escherichia coli ECRC62 BNILDI_06395 pdeC c-di-GMP phosphodiesterase PdeC insig. 32 98
  Escherichia coli ECRC100 OKFHMN_12880 pdeC c-di-GMP phosphodiesterase PdeC insig. 32 98
  Escherichia coli ECRC101 MCAODC_03390 pdeC c-di-GMP phosphodiesterase PdeC insig. 32 98
  Escherichia coli ECRC98 JDDGAC_16515 pdeC c-di-GMP phosphodiesterase PdeC insig. 32 98
  Escherichia coli ECRC99 KEDOAH_15270 pdeC c-di-GMP phosphodiesterase PdeC no data 32 98
  Escherichia coli ECRC102 NIAGMN_10725 pdeC c-di-GMP phosphodiesterase PdeC insig. 32 98
  Klebsiella michiganensis M5al BWI76_RS06685 cyclic diguanylate phosphodiesterase (EAL) domain-containing protein insig. 34 98
  Escherichia coli ECOR27 NOLOHH_05130 pdeC c-di-GMP phosphodiesterase PdeC insig. 32 98
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1440 FIG00638940: hypothetical protein cofit 32 98
o Synechococcus elongatus PCC 7942 Synpcc7942_0122 EAL insig. 30 97
  Klebsiella pneumoniae MKP103 KDGMDA_10480 EAL domain-containing protein insig. 30 98
  Pseudomonas sp. S08-1 OH686_12165 Rtn protein cofit 50 46
  Acidovorax sp. GW101-3H11 Ac3H11_392 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 32 97
o Pectobacterium carotovorum WPP14 HER17_RS16195 EAL domain-containing protein insig. 30 99
  Erwinia amylovora T8 OLJFJH_04460 cyclic diguanylate phosphodiesterase insig. 38 59
  Pseudomonas fluorescens SBW25 PFLU_RS05520 GGDEF and EAL domain-containing protein insig. 41 50
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05520 GGDEF and EAL domain-containing protein insig. 41 50
  Pseudomonas aeruginosa PUPa3 DQ20_RS36445 EAL domain-containing protein insig. 42 49
  Pseudomonas aeruginosa MRSN321 DY961_RS22900 EAL domain-containing protein insig. 42 49
  Pseudomonas aeruginosa PA14 IKLFDK_22535 bifunctional diguanylate cyclase/phosphodiesterase insig. 42 49
  Escherichia coli ECRC100 OKFHMN_04530 eAL EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) no data 36 60
  Escherichia coli ECRC101 MCAODC_23905 eAL EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) insig. 36 60
  Escherichia coli ECRC102 NIAGMN_23805 eAL EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) insig. 36 60
  Escherichia coli ECRC98 JDDGAC_08140 eAL EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) insig. 36 60
  Escherichia coli ECRC99 KEDOAH_23215 eAL EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) no data 36 60
  Pantoea sp. MT58 IAI47_01435 EAL domain-containing protein insig. 39 56
  Pseudomonas sp. SVBP6 COO64_RS20895 bifunctional diguanylate cyclase/phosphodiesterase insig. 41 50
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 41 50
  Pseudomonas sp. SVBP6 COO64_RS01840 EAL domain-containing protein insig. 42 48
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3196 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 39 54
  Shewanella oneidensis MR-1 SO0141 sensory box protein (NCBI ptt file) strong 38 48
  Pseudomonas aeruginosa MRSN321 DY961_RS17255 EAL domain-containing protein insig. 29 95
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS17945 EAL domain-containing protein cofit 38 56
  Cupriavidus basilensis FW507-4G11 RR42_RS34735 diguanylate phosphodiesterase insig. 40 53
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1521 diguanylate cyclase (GGDEF) domain cofit 40 49
  Kangiella aquimarina DSM 16071 B158DRAFT_0955 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 40 49
  Pseudomonas aeruginosa PUPa3 DQ20_RS39495 EAL domain-containing protein insig. 29 95
  Herbaspirillum seropedicae SmR1 HSERO_RS23840 hypothetical protein sig. 42 49
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04630 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein insig. 41 47
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01275 hypothetical protein cofit 39 50
  Paraburkholderia sabiae LMG 24235 QEN71_RS02090 EAL domain-containing protein insig. 41 47
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5465 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 52
  Pseudomonas simiae WCS417 PS417_05435 diguanylate cyclase insig. 40 50
  Pseudomonas fluorescens FW300-N2C3 AO356_17705 diguanylate cyclase insig. 37 52
  Pseudomonas sp. DMC3 GFF2936 putative cyclic di-GMP phosphodiesterase PdeG cofit 33 60
  Methylophilus sp. DMC18 GFF247 hypothetical protein insig. 40 48
  Enterobacter sp. TBS_079 MPMX20_04655 putative cyclic di-GMP phosphodiesterase PdeG insig. 38 54
  Marinobacter adhaerens HP15 HP15_1415 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) insig. 41 48
  Pseudomonas sp. RS175 PFR28_03484 hypothetical protein strong 38 52
  Pseudomonas stutzeri RCH2 Psest_3777 diguanylate cyclase (GGDEF) domain sig. 39 50
  Bosea sp. OAE506 ABIE41_RS11330 EAL domain-containing protein insig. 38 49
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4274 Sensory box/GGDEF family protein insig. 40 49
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 38 51
  Rhodospirillum rubrum S1H Rru_A2406 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation (NCBI) insig. 41 50
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2007 Sensory box/GGDEF family protein insig. 40 48
  Pseudomonas orientalis W4I3 QF045_RS02015 bifunctional diguanylate cyclase/phosphodiesterase cofit 38 50
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_790 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 52
  Rhodanobacter denitrificans MT42 LRK55_RS08620 GGDEF and EAL domain-containing protein insig. 41 50