Homologs of GFF353 from Variovorax sp. SCN45

FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster
SEED: FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster
KEGG: hypothetical protein

96 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF353 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster no data 100 100
o Variovorax sp. OAS795 ABID97_RS16965 Trm112 family protein no data 98 100
o Acidovorax sp. GW101-3H11 Ac3H11_2386 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster no data 88 97
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4507 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster no data 82 95
o Methylophilus sp. DMC18 GFF780 hypothetical protein no data 68 98
o Pseudomonas sp. BP01 JOY50_RS16855 Trm112 family protein no data 67 95
o Pseudomonas sp. SVBP6 COO64_RS05870 Trm112 family protein no data 67 95
o Pseudomonas putida KT2440 PP_1901 conserved protein of unknown function, UPF0434 family no data 67 95
o Xanthobacter sp. DMC5 GFF2435 hypothetical protein no data 64 98
o Pseudomonas sp. RS175 PFR28_03027 hypothetical protein no data 67 95
o Pseudomonas fluorescens FW300-N2E3 AO353_01445 hypothetical protein no data 65 95
o Pseudomonas sp. DMC3 GFF4774 hypothetical protein no data 65 95
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2087 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster no data 65 95
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_469 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster no data 65 95
o Pseudomonas fluorescens FW300-N2C3 AO356_20080 hypothetical protein no data 65 95
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5934 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster no data 65 95
o Pseudomonas fluorescens SBW25 PFLU_RS18380 Trm112 family protein no data 63 95
o Pseudomonas fluorescens SBW25-INTG PFLU_RS18380 Trm112 family protein no data 63 95
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03593 hypothetical protein no data 63 95
o Pseudomonas orientalis W4I3 QF045_RS18085 Trm112 family protein no data 63 95
o Pseudomonas simiae WCS417 PS417_16330 hypothetical protein no data 63 95
o Rhodopseudomonas palustris CGA009 TX73_001405 Trm112 family protein insig. 65 90
o Pseudomonas sp. S08-1 OH686_22065 Protein YcaR in KDO2-Lipid A biosynthesis cluster no data 63 95
o Sinorhizobium meliloti 1021 SMc03803 hypothetical protein no data 62 92
o Pseudomonas aeruginosa MRSN321 DY961_RS02070 Trm112 family protein no data 61 95
o Pseudomonas aeruginosa PA14 IKLFDK_15160 UPF0434 protein PA14_25520 no data 61 95
o Pseudomonas aeruginosa PUPa3 DQ20_RS33510 Trm112 family protein no data 61 95
o Dinoroseobacter shibae DFL-12 Dshi_0033 protein of unknown function DUF343 (RefSeq) insig. 60 88
o Dickeya dadantii 3937 DDA3937_RS09850 hypothetical protein no data 61 98
o Dickeya dianthicola 67-19 HGI48_RS09860 hypothetical protein no data 59 98
o Dickeya dianthicola ME23 DZA65_RS10190 hypothetical protein no data 59 98
o Rhizobium sp. OAE497 ABIE40_RS18440 Trm112 family protein strong 62 92
o Bosea sp. OAE506 ABIE41_RS04775 Trm112 family protein no data 60 92
  Azospirillum sp. SherDot2 MPMX19_01908 hypothetical protein no data 62 88
  Azospirillum brasilense Sp245 AZOBR_RS00135 hypothetical protein no data 62 88
o Kangiella aquimarina DSM 16071 B158DRAFT_1600 Uncharacterized conserved protein no data 57 97
o Serratia liquefaciens MT49 IAI46_08695 hypothetical protein no data 61 95
o Caulobacter crescentus NA1000 CCNA_00107 Trm112p-like protein sig. 60 88
o Caulobacter crescentus NA1000 Δfur CCNA_00107 Trm112p-like protein no data 60 88
o Pseudomonas stutzeri RCH2 Psest_1675 Uncharacterized conserved protein no data 60 95
o Rahnella sp. WP5 EX31_RS18200 hypothetical protein no data 61 95
o Pantoea sp. MT58 IAI47_12820 hypothetical protein no data 60 97
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS04510 hypothetical protein no data 60 97
o Pectobacterium carotovorum WPP14 HER17_RS12090 hypothetical protein no data 60 97
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3674 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster no data 58 95
o Agrobacterium fabrum C58 Atu3696 hypothetical protein no data 58 92
o Vibrio cholerae E7946 ATCC 55056 CSW01_09400 hypothetical protein no data 56 95
o Enterobacter asburiae PDN3 EX28DRAFT_2019 Uncharacterized conserved protein no data 58 95
o Enterobacter sp. TBS_079 MPMX20_01575 hypothetical protein no data 58 95
  Paraburkholderia graminis OAS925 ABIE53_003346 uncharacterized protein YbaR (Trm112 family) no data 59 85
o Escherichia coli BL21 ECD_00921 peroxide and acid resistance protein, UPF0434 family no data 58 95
o Escherichia fergusonii Becca EFB2_03147 hypothetical protein no data 58 95
o Escherichia coli ECOR27 NOLOHH_22000 ycaR protein YcaR no data 58 95
o Escherichia coli ECOR38 HEPCGN_23085 ycaR protein YcaR no data 58 95
o Escherichia coli ECRC100 OKFHMN_05440 ycaR protein YcaR no data 58 95
o Escherichia coli ECRC101 MCAODC_24830 ycaR protein YcaR no data 58 95
o Escherichia coli ECRC102 NIAGMN_03160 ycaR protein YcaR no data 58 95
o Escherichia coli ECRC62 BNILDI_20255 ycaR protein YcaR no data 58 95
o Escherichia coli ECRC98 JDDGAC_09050 ycaR protein YcaR no data 58 95
o Escherichia coli ECRC99 KEDOAH_22295 ycaR protein YcaR no data 58 95
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02750 hypothetical protein no data 58 95
o Escherichia coli Nissle 1917 ECOLIN_RS04855 protein YcaR no data 58 95
o Escherichia coli BW25113 b0917 ycaR hypothetical protein (NCBI) no data 58 95
  Burkholderia phytofirmans PsJN BPHYT_RS15875 hypothetical protein no data 59 85
  Paraburkholderia sabiae LMG 24235 QEN71_RS02825 Trm112 family protein no data 59 85
o Pseudomonas segetis P6 ACVTMO_RS10195 Trm112 family protein no data 58 95
o Erwinia amylovora T8 OLJFJH_16100 UPF0434 protein ETA_21370 no data 58 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04111 hypothetical protein no data 57 85
o Dechlorosoma suillum PS Dsui_3264 hypothetical protein insig. 53 95
o Klebsiella pneumoniae MKP103 KDGMDA_18010 protein YcaR no data 56 95
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14145 Trm112 family protein no data 53 88
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_20345 UPF0434 protein YcaR no data 56 95
o Erwinia tracheiphila SCR3 LU632_RS09840 hypothetical protein no data 56 95
o Klebsiella michiganensis M5al BWI76_RS09810 hypothetical protein no data 56 95
o Marinobacter adhaerens HP15 HP15_2062 YcaR-like protein sig. 54 95
o Herbaspirillum seropedicae SmR1 HSERO_RS05870 hypothetical protein no data 48 90
o Castellaniella sp019104865 MT123 ABCV34_RS05350 Trm112 family protein no data 56 90
  Phaeobacter inhibens DSM 17395 PGA1_c33250 Uncharacterized conserved protein strong 53 88
o Magnetospirillum magneticum AMB-1 AMB_RS00055 hypothetical protein no data 54 87
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS05080 hypothetical protein no data 55 85
o Ralstonia solanacearum GMI1000 RS_RS12690 hypothetical protein no data 55 85
o Ralstonia solanacearum UW163 UW163_RS08545 hypothetical protein no data 55 85
o Rhodospirillum rubrum S1H Rru_A3709 Protein of unknown function DUF343 (NCBI) no data 50 93
o Sphingobium sp. HT1-2 GFF2473 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster no data 56 90
o Ralstonia sp. UNC404CL21Col ABZR87_RS00730 Trm112 family protein no data 55 85
o Ralstonia solanacearum PSI07 RPSI07_RS12215 hypothetical protein no data 55 85
o Shewanella sp. ANA-3 Shewana3_2582 hypothetical protein (RefSeq) no data 49 92
o Shewanella oneidensis MR-1 SO2800 conserved hypothetical protein (NCBI ptt file) no data 49 92
o Cupriavidus basilensis FW507-4G11 RR42_RS03455 hypothetical protein no data 53 85
o Shewanella loihica PV-4 Shew_1640 hypothetical protein (RefSeq) no data 48 93
o Alteromonas macleodii MIT1002 MIT1002_01929 Trm112p-like protein insig. 50 90
o Shewanella amazonensis SB2B Sama_1339 hypothetical protein (RefSeq) no data 52 83
  Dickeya dianthicola 67-19 HGI48_RS07025 Trm112 family protein cofit 40 83
  Mycobacterium tuberculosis H37Rv Rv1684 Conserved hypothetical protein no data 44 95
  Dickeya dianthicola ME23 DZA65_RS07505 Trm112 family protein insig. 38 83
  Desulfovibrio vulgaris Hildenborough JW710 DVU0656 conserved hypothetical protein (TIGR) no data 39 98