Homologs of GFF3160 from Sphingobium sp. HT1-2

LSU ribosomal protein L4p (L1e)
SEED: LSU ribosomal protein L4p (L1e)
KEGG: large subunit ribosomal protein L4

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF3160 LSU ribosomal protein L4p (L1e) no data 100 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3730 50S ribosomal protein L4, bacterial/organelle no data 74 100
o Xanthobacter sp. DMC5 GFF1378 50S ribosomal protein L4 no data 54 99
o Bosea sp. OAE506 ABIE41_RS14555 50S ribosomal protein L4 no data 54 100
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03915 50S ribosomal protein L4 no data 53 100
o Rhizobium sp. OAE497 ABIE40_RS07860 50S ribosomal protein L4 no data 52 99
o Rhodospirillum rubrum S1H Rru_A2687 Ribosomal protein L4/L1e (NCBI) no data 52 100
o Rhodopseudomonas palustris CGA009 TX73_016800 50S ribosomal protein L4 no data 50 100
o Dinoroseobacter shibae DFL-12 Dshi_0277 ribosomal protein L4/L1e (RefSeq) no data 52 100
o Agrobacterium fabrum C58 Atu1945 50S ribosomal protein L4 no data 52 99
o Sinorhizobium meliloti 1021 SMc01308 50S ribosomal protein L4 no data 51 99
o Caulobacter crescentus NA1000 CCNA_01307 LSU ribosomal protein L1E-L4P no data 51 99
o Caulobacter crescentus NA1000 Δfur CCNA_01307 LSU ribosomal protein L1E-L4P no data 51 99
o Phaeobacter inhibens DSM 17395 PGA1_c01560 50S ribosomal protein L4 no data 50 99
o Azospirillum brasilense Sp245 AZOBR_RS11465 50S ribosomal protein L4 no data 50 99
o Magnetospirillum magneticum AMB-1 AMB_RS15765 50S ribosomal protein L4 no data 52 99
o Azospirillum sp. SherDot2 MPMX19_00393 50S ribosomal protein L4 no data 51 99
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS16975 50S ribosomal protein L4 no data 34 100
o Bacteroides thetaiotaomicron VPI-5482 BT2726 50S ribosomal protein L4 (NCBI ptt file) no data 35 98
o Desulfovibrio vulgaris Miyazaki F DvMF_0080 rplD 50S ribosomal protein L4 (RefSeq) no data 37 99
o Bacteroides stercoris CC31F HMPREF1181_RS00520 50S ribosomal protein L4 no data 33 98
o Phocaeicola dorei CL03T12C01 ABI39_RS03725 50S ribosomal protein L4 no data 34 98
o Fusobacterium nucleatum SB010 HUW76_09200 50S ribosomal protein L4 no data 37 97
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09340 50S ribosomal protein L4 no data 34 98
o Bacteroides ovatus ATCC 8483 BACOVA_01026 putative 50S ribosomal protein L4 no data 34 98
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0254 50S ribosomal protein L4, bacterial/organelle no data 37 91
o Desulfovibrio vulgaris Hildenborough JW710 DVU1304 rplD ribosomal protein L4 (TIGR) no data 37 99
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS16920 50S ribosomal protein L4 no data 34 99
o Cellulophaga baltica 18 M666_RS01010 50S ribosomal protein L4 no data 34 98
o Acinetobacter radioresistens SK82 MPMX26_02720 50S ribosomal protein L4 no data 32 96
o Acinetobacter baumannii LAC-4 RR41_RS02165 50S ribosomal protein L4 no data 34 97
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00455 50S ribosomal protein L4 no data 32 99
o Mycobacterium tuberculosis H37Rv Rv0702 50S ribosomal protein L4 RplD no data 35 98
o Vibrio cholerae E7946 ATCC 55056 CSW01_13135 50S ribosomal protein L4 no data 35 92
o Alteromonas macleodii MIT1002 MIT1002_00385 50S ribosomal protein L4 no data 33 92
o Pseudomonas stutzeri RCH2 Psest_3605 50S ribosomal protein L4, bacterial/organelle no data 32 94
o Synechococcus elongatus PCC 7942 Synpcc7942_2231 rplD 50S ribosomal protein L4 no data 33 98
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19350 50S ribosomal protein L4 no data 29 100
o Pseudomonas sp. DMC3 GFF3765 50S ribosomal protein L4 no data 32 98
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1255 LSU ribosomal protein L4p (L1e) no data 32 98
o Pseudomonas sp. SVBP6 COO64_RS16215 rplD 50S ribosomal protein L4 no data 34 98
o Pseudomonas fluorescens SBW25 PFLU_RS27160 50S ribosomal protein L4 no data 32 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS27160 50S ribosomal protein L4 no data 32 98
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05221 50S ribosomal protein L4 no data 32 98
o Pseudomonas orientalis W4I3 QF045_RS27555 50S ribosomal protein L4 no data 32 98
o Pseudomonas simiae WCS417 PS417_25530 50S ribosomal protein L4 no data 32 98
o Pseudomonas sp. BP01 JOY50_RS20445 rplD 50S ribosomal protein L4 no data 34 98
o Pseudomonas putida KT2440 PP_0455 50S ribosomal protein L4 no data 34 98
o Pseudomonas syringae pv. syringae B728a Psyr_4547 LSU ribosomal protein L4P no data 32 98
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4547 LSU ribosomal protein L4P no data 32 98
o Acidovorax sp. GW101-3H11 Ac3H11_2134 LSU ribosomal protein L4p (L1e) no data 32 93
o Pseudomonas sp. RS175 PFR28_04001 50S ribosomal protein L4 no data 32 98
o Pseudomonas fluorescens FW300-N2E3 AO353_06995 50S ribosomal protein L4 no data 32 98
o Pseudomonas fluorescens FW300-N2C3 AO356_14650 50S ribosomal protein L4 no data 32 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4860 LSU ribosomal protein L4p (L1e) no data 32 98
o Bifidobacterium breve UCC2003 BBR_RS18930 50S ribosomal protein L4 no data 32 98
o Rhodanobacter sp. FW510-T8 OKGIIK_10460 rplD 50S ribosomal protein L4 no data 35 94
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS06375 50S ribosomal protein L4 no data 35 94
o Pseudomonas aeruginosa MRSN321 DY961_RS29545 rplD;go_component=cytosolic 50S ribosomal protein L4 no data 32 94
o Pseudomonas aeruginosa PA14 IKLFDK_21935 50S ribosomal protein L4 no data 32 94
o Pseudomonas aeruginosa PUPa3 DQ20_RS43870 rplD;go_component=cytosolic 50S ribosomal protein L4 no data 32 94
o Kangiella aquimarina DSM 16071 B158DRAFT_1877 LSU ribosomal protein L4P no data 31 94
o Variovorax sp. OAS795 ABID97_RS00650 50S ribosomal protein L4 no data 30 99
o Pseudomonas segetis P6 ACVTMO_RS04645 rplD 50S ribosomal protein L4 no data 29 94
o Shewanella sp. ANA-3 Shewana3_0200 rplD 50S ribosomal protein L4 (RefSeq) no data 31 92
o Shewanella oneidensis MR-1 SO0232 rplD ribosomal protein L4 (NCBI ptt file) no data 31 92
o Variovorax sp. SCN45 GFF3636 LSU ribosomal protein L4p (L1e) no data 30 99
o Rhodanobacter denitrificans MT42 LRK55_RS03320 50S ribosomal protein L4 no data 34 94
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS03570 50S ribosomal protein L4 no data 34 94
o Klebsiella michiganensis M5al BWI76_RS25835 50S ribosomal protein L4 no data 32 92
o Pantoea sp. MT58 IAI47_02120 50S ribosomal protein L4 no data 31 92
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS22365 50S ribosomal protein L4 no data 31 92
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2583 LSU ribosomal protein L4p (L1e) no data 31 98
o Escherichia coli BL21 ECD_03170 50S ribosomal subunit protein L4 no data 32 92
o Escherichia fergusonii Becca EFB2_00504 50S ribosomal protein L4 no data 32 92
o Escherichia coli ECOR27 NOLOHH_09165 rplD 50S ribosomal protein L4 no data 32 92
o Escherichia coli ECOR38 HEPCGN_16195 rplD 50S ribosomal protein L4 no data 32 92
o Escherichia coli ECRC100 OKFHMN_17365 rplD 50S ribosomal protein L4 no data 32 92
o Escherichia coli ECRC101 MCAODC_07895 rplD 50S ribosomal protein L4 no data 32 92
o Escherichia coli ECRC102 NIAGMN_15135 rplD 50S ribosomal protein L4 no data 32 92
o Escherichia coli ECRC62 BNILDI_02355 rplD 50S ribosomal protein L4 no data 32 92
o Escherichia coli ECRC98 JDDGAC_20995 rplD 50S ribosomal protein L4 no data 32 92
o Escherichia coli ECRC99 KEDOAH_10775 rplD 50S ribosomal protein L4 no data 32 92
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00384 50S ribosomal protein L4 no data 32 92
o Escherichia coli Nissle 1917 ECOLIN_RS19030 50S ribosomal protein L4 no data 32 92
o Enterobacter asburiae PDN3 EX28DRAFT_0007 LSU ribosomal protein L4P no data 32 92
o Enterobacter sp. TBS_079 MPMX20_04226 50S ribosomal protein L4 no data 32 92
o Erwinia amylovora T8 OLJFJH_03880 50S ribosomal protein L4 no data 32 92
o Escherichia coli BW25113 b3319 rplD 50S ribosomal protein L4 (NCBI) no data 32 92
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2361 LSU ribosomal protein L4p (L1e) no data 32 92
o Pectobacterium carotovorum WPP14 HER17_RS02070 50S ribosomal protein L4 no data 32 92
o Dechlorosoma suillum PS Dsui_0358 50S ribosomal protein L4, bacterial/organelle no data 31 98
o Dickeya dadantii 3937 DDA3937_RS19280 50S ribosomal protein L4 no data 31 92
o Pseudomonas sp. S08-1 OH686_15360 50S ribosomal protein L4 no data 31 94
o Dickeya dianthicola 67-19 HGI48_RS19380 50S ribosomal protein L4 no data 32 92
o Dickeya dianthicola ME23 DZA65_RS20500 50S ribosomal protein L4 no data 32 92
o Marinobacter adhaerens HP15 HP15_381 50S ribosomal protein L4 no data 30 90
o Rahnella sp. WP5 EX31_RS16135 50S ribosomal protein L4 no data 31 92
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS21900 50S ribosomal protein L4 no data 33 94
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2910 LSU ribosomal protein L4p (L1e) no data 29 99