| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pseudomonas simiae WCS417 | PS417_16085 | | LysR family transcriptional regulator | insig. | 100 | 100 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS18050 | | LysR family transcriptional regulator | insig. | 98 | 100 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS18050 | | LysR family transcriptional regulator | insig. | 98 | 100 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02593 | | HTH-type transcriptional regulator DmlR | cofit | 96 | 100 |
| o | Pseudomonas orientalis W4I3 | QF045_RS13895 | | LysR family transcriptional regulator | insig. | 97 | 100 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3857 | | Transcriptional regulator, LysR family | insig. | 85 | 99 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5905 | | Transcriptional regulator, LysR family | insig. | 83 | 100 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_22295 | | LysR family transcriptional regulator | insig. | 84 | 99 |
| o | Pseudomonas sp. DMC3 | GFF943 | | HTH-type transcriptional regulator DmlR | cofit | 84 | 99 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_3607 | | transcriptional regulator, LysR family | insig. | 80 | 100 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3607 | | transcriptional regulator, LysR family | insig. | 80 | 100 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_259 | | Transcriptional regulator, LysR family | insig. | 79 | 99 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_21990 | | LysR family transcriptional regulator | insig. | 79 | 99 |
| o | Pseudomonas sp. RS175 | PFR28_02643 | | HTH-type transcriptional regulator DmlR | insig. | 80 | 98 |
| o | Pseudomonas putida KT2440 | PP_3811 | | Transcriptional regulator, LysR family | insig. | 76 | 99 |
| o | Pseudomonas sp. BP01 | JOY50_RS04745 | | LysR family transcriptional regulator | insig. | 75 | 99 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS26820 | | LysR family transcriptional regulator | insig. | 53 | 98 |
| o | Paraburkholderia graminis OAS925 | ABIE53_005907 | | DNA-binding transcriptional LysR family regulator | insig. | 53 | 98 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02887 | | transcriptional regulator, LysR family | no data | 53 | 98 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS14890 | | LysR family transcriptional regulator | insig. | 51 | 99 |
| o | Rahnella sp. WP5 | EX31_RS16730 | | LysR family transcriptional regulator | insig. | 49 | 98 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS21915 | | LysR family transcriptional regulator | strong | 48 | 99 |
| o | Azospirillum sp. SherDot2 | MPMX19_05002 | | HTH-type transcriptional regulator DmlR | insig. | 47 | 99 |
| o | Pantoea sp. MT58 | IAI47_20580 | | LysR family transcriptional regulator | sig. | 51 | 98 |
| o | Magnetospirillum magneticum AMB-1 | AMB_RS01140 | | LysR family transcriptional regulator | cofit | 47 | 97 |
| o | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS14170 | | LysR family transcriptional regulator | insig. | 50 | 98 |
| o | Marinobacter adhaerens HP15 | HP15_936 | | transcriptional regulator, LysR family protein | insig. | 44 | 97 |
| o | Rhodospirillum rubrum S1H | Rru_A1041 | | Transcriptional Regulator, LysR family (NCBI) | insig. | 43 | 98 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS02935 | | LysR family transcriptional regulator | insig. | 39 | 99 |
| o | Methylophilus sp. DMC18 | GFF2818 | | HTH-type transcriptional regulator DmlR | insig. | 39 | 99 |
| o | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS15810 | | LysR family transcriptional regulator | insig. | 42 | 99 |
| o | Rhodanobacter denitrificans MT42 | LRK55_RS12490 | | LysR family transcriptional regulator | insig. | 42 | 99 |
| o | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS12790 | | LysR family transcriptional regulator | insig. | 42 | 99 |
| o | Shewanella sp. ANA-3 | Shewana3_3800 | | LysR family transcriptional regulator (RefSeq) | insig. | 40 | 100 |
| | Pseudomonas sp. RS175 | PFR28_00753 | | HTH-type transcriptional regulator DmlR | insig. | 41 | 99 |
| | Serratia liquefaciens MT49 | IAI46_16195 | | LysR family transcriptional regulator | insig. | 42 | 98 |
| o | Shewanella loihica PV-4 | Shew_2278 | | LysR family transcriptional regulator (RefSeq) | insig. | 39 | 98 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF461 | | Transcriptional regulator, LysR family | insig. | 42 | 97 |
| | Azospirillum brasilense Sp245 | AZOBR_RS30015 | | LysR family transcriptional regulator | insig. | 42 | 98 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4454 | | Transcriptional regulator, LysR family | insig. | 41 | 99 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2951 | | transcriptional regulator, LysR family | insig. | 40 | 97 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2951 | | transcriptional regulator, LysR family | insig. | 40 | 97 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS09305 | | LysR family transcriptional regulator | insig. | 43 | 96 |
| o | Alteromonas macleodii MIT1002 | MIT1002_02164 | | D-malate degradation protein R | insig. | 38 | 99 |
| o | Bosea sp. OAE506 | ABIE41_RS06370 | | LysR family transcriptional regulator | insig. | 42 | 99 |
| | Azospirillum sp. SherDot2 | MPMX19_04565 | | HTH-type transcriptional regulator PgrR | insig. | 42 | 97 |
| o | Synechocystis sp000284455 PCC 6803 | SGL_RS07535 | | LysR family transcriptional regulator | strong | 38 | 98 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_23090 | | LysR family transcriptional regulator | insig. | 40 | 98 |
| o | Lysobacter sp. OAE881 | ABIE51_RS12770 | | LysR family transcriptional regulator | insig. | 40 | 99 |
| o | Dechlorosoma suillum PS | Dsui_2353 | | transcriptional regulator | insig. | 41 | 97 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS03985 | | LysR family transcriptional regulator | insig. | 38 | 99 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS15205 | | LysR family transcriptional regulator | insig. | 39 | 99 |
| | Rhodospirillum rubrum S1H | Rru_A2257 | | Transcriptional Regulator, LysR family (NCBI) | strong | 40 | 99 |
| o | Pseudomonas segetis P6 | ACVTMO_RS22150 | | LysR family transcriptional regulator | insig. | 39 | 99 |
| o | Variovorax sp. SCN45 | GFF7142 | | Transcriptional regulator, LysR family | insig. | 38 | 99 |
| o | Rhizobium sp. OAE497 | ABIE40_RS03550 | | LysR family transcriptional regulator | strong | 38 | 98 |
| | Shewanella oneidensis MR-1 | SOA0165 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 37 | 99 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_19415 | | LysR family transcriptional regulator | insig. | 37 | 99 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01562 | | transcriptional regulator, LysR family | insig. | 40 | 98 |
| o | Sinorhizobium meliloti 1021 | SMc00831 | | transcriptional regulator | insig. | 38 | 97 |
| | Shewanella loihica PV-4 | Shew_1539 | | LysR family transcriptional regulator (RefSeq) | insig. | 39 | 97 |
| | Bosea sp. OAE506 | ABIE41_RS22155 | | LysR family transcriptional regulator | insig. | 39 | 98 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03714 | | transcriptional regulator, LysR family | insig. | 39 | 97 |
| | Pseudomonas sp. BP01 | JOY50_RS26935 | | LysR substrate-binding domain-containing protein | insig. | 39 | 98 |
| o | Pseudomonas sp. S08-1 | OH686_04560 | | Transcriptional regulator, LysR family | cofit | 41 | 96 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS04600 | | LysR family transcriptional regulator | insig. | 39 | 98 |
| o | Dickeya dianthicola ME23 | DZA65_RS14555 | | LysR family transcriptional regulator | insig. | 37 | 100 |
| | Serratia liquefaciens MT49 | IAI46_12425 | | LysR family transcriptional regulator | sig. | 39 | 96 |
| o | Dinoroseobacter shibae DFL-12 | Dshi_0123 | | transcriptional regulator, LysR family (RefSeq) | sig. | 38 | 97 |
| | Shewanella oneidensis MR-1 | SO0369 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 38 | 99 |
| o | Phaeobacter inhibens DSM 17395 | PGA1_c29160 | | HTH-type transcriptional regulator, LysR family | insig. | 38 | 99 |
| | Rhizobium sp. OAE497 | ABIE40_RS03475 | | LysR family transcriptional regulator | insig. | 39 | 98 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS01575 | | transcriptional regulator | sig. | 37 | 99 |
| | Pseudomonas sp. SVBP6 | COO64_RS24670 | | LysR family transcriptional regulator | insig. | 40 | 99 |
| o | Castellaniella sp019104865 MT123 | ABCV34_RS01420 | | LysR family transcriptional regulator | insig. | 40 | 99 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS12295 | | LysR family transcriptional regulator | sig. | 37 | 98 |
| | Lysobacter sp. OAE881 | ABIE51_RS06090 | | LysR family transcriptional regulator | insig. | 42 | 97 |
| | Azospirillum sp. SherDot2 | MPMX19_04441 | | HTH-type transcriptional regulator DmlR | insig. | 39 | 100 |
| | Azospirillum sp. SherDot2 | MPMX19_02783 | | HTH-type transcriptional regulator DmlR | insig. | 39 | 98 |
| | Agrobacterium fabrum C58 | Atu0664 | | transcriptional regulator, LysR family | strong | 38 | 97 |
| | Alteromonas macleodii MIT1002 | MIT1002_02674 | | D-malate degradation protein R | strong | 37 | 98 |
| | Paraburkholderia graminis OAS925 | ABIE53_002538 | | DNA-binding transcriptional LysR family regulator | sig. | 37 | 98 |
| | Ralstonia solanacearum GMI1000 | RS_RS21490 | | LysR family transcriptional regulator | insig. | 37 | 99 |
| | Bosea sp. OAE506 | ABIE41_RS20280 | | LysR family transcriptional regulator | insig. | 41 | 95 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS08715 | | LysR family transcriptional regulator | sig. | 40 | 98 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS16850 | | LysR family transcriptional regulator | insig. | 42 | 99 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS39125 | | LysR family transcriptional regulator | insig. | 42 | 99 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS33760 | | hypothetical protein | insig. | 38 | 96 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00578 | | transcriptional regulator, LysR family | insig. | 37 | 98 |
| | Shewanella amazonensis SB2B | Sama_0005 | | LysR, substrate-binding (RefSeq) | insig. | 36 | 98 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_10365 | | LysR family transcriptional regulator | insig. | 42 | 99 |
| o | Pseudomonas stutzeri RCH2 | Psest_2163 | | Transcriptional regulator | insig. | 40 | 95 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3107 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | insig. | 38 | 99 |
| | Methylophilus sp. DMC18 | GFF2116 | | HTH-type transcriptional regulator PgrR | insig. | 37 | 100 |
| | Ralstonia solanacearum GMI1000 | RS_RS22650 | | LysR family transcriptional regulator | insig. | 41 | 97 |
| | Alteromonas macleodii MIT1002 | MIT1002_03088 | | D-malate degradation protein R | insig. | 36 | 99 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS36620 | | LysR family transcriptional regulator | insig. | 38 | 97 |
| | Dechlorosoma suillum PS | Dsui_0016 | | transcriptional regulator | strong | 38 | 98 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_28465 | | LysR family transcriptional regulator | insig. | 43 | 91 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS01230 | | LysR family transcriptional regulator | insig. | 41 | 98 |