Homologs of HP15_302 from Marinobacter adhaerens HP15

protein containing pseudouridine synthase domain
SEED: Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase A

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Marinobacter adhaerens HP15 HP15_302 protein containing pseudouridine synthase domain insig. 100 100
o Shewanella loihica PV-4 Shew_2547 pseudouridine synthase (RefSeq) insig. 43 93
o Kangiella aquimarina DSM 16071 B158DRAFT_0447 Pseudouridylate synthases, 23S RNA-specific insig. 47 88
  Dechlorosoma suillum PS Dsui_3205 pseudouridine synthase, RluA family insig. 35 67
  Bacteroides stercoris CC31F HMPREF1181_RS16530 RluA family pseudouridine synthase insig. 29 95
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03715 RluA family pseudouridine synthase insig. 31 96
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0664 pseudouridine synthase, RluA family strong 35 53
  Phocaeicola dorei CL03T12C01 ABI39_RS17485 RluA family pseudouridine synthase insig. 30 96
  Shewanella amazonensis SB2B Sama_2197 pseudouridylate synthase (RefSeq) insig. 36 62
  Fusobacterium nucleatum SB010 HUW76_08575 RluA family pseudouridine synthase strong 32 71
  Kangiella aquimarina DSM 16071 B158DRAFT_1363 Pseudouridylate synthases, 23S RNA-specific insig. 27 90
  Enterobacter sp. TBS_079 MPMX20_00752 Dual-specificity RNA pseudouridine synthase RluA insig. 34 70
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF184 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) cofit 33 70
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1033 pseudouridine synthase, RluA family no data 34 56
  Rahnella sp. WP5 EX31_RS03750 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 33 62
  Dechlorosoma suillum PS Dsui_2530 pseudouridine synthase, RluA family sig. 32 74
  Bacteroides ovatus ATCC 8483 BACOVA_02266 pseudouridine synthase, RluA family insig. 28 98
  Enterobacter asburiae PDN3 EX28DRAFT_3650 pseudouridine synthase, RluA family insig. 34 70
  Shewanella loihica PV-4 Shew_2529 pseudouridine synthase (RefSeq) insig. 39 50
  Escherichia coli BL21 ECD_00060 dual specificity 23S rRNA pseudouridine(746), tRNA pseudouridine(32) synthase, SAM-dependent cofit 33 70
  Escherichia coli ECOR27 NOLOHH_03150 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 33 70
  Escherichia coli ECOR38 HEPCGN_08795 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 33 70
  Escherichia coli ECRC62 BNILDI_08455 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 33 70
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03600 Ribosomal large subunit pseudouridine synthase A insig. 33 70
  Escherichia coli BW25113 b0058 rluA pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32) (NCBI) sig. 33 70
  Klebsiella michiganensis M5al BWI76_RS04565 bifunctional tRNA pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase RluA sig. 33 70
  Escherichia coli Nissle 1917 ECOLIN_RS00310 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 33 70
  Escherichia fergusonii Becca EFB2_03987 Dual-specificity RNA pseudouridine synthase RluA insig. 33 70
  Escherichia coli ECRC101 OKFHMN_10805 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 33 70
  Escherichia coli ECRC101 MCAODC_01320 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 33 70
  Escherichia coli ECRC102 NIAGMN_08655 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 33 70
  Escherichia coli ECRC98 JDDGAC_14400 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA no data 33 70
  Escherichia coli ECRC99 KEDOAH_17350 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA no data 33 70
  Bacteroides thetaiotaomicron VPI-5482 BT0642 RNA pseudouridylate synthase (NCBI ptt file) sig. 27 95
  Shewanella loihica PV-4 Shew_0783 pseudouridylate synthase (RefSeq) no data 30 65
  Enterobacter asburiae PDN3 EX28DRAFT_1359 Pseudouridylate synthases, 23S RNA-specific insig. 35 52
  Serratia liquefaciens MT49 IAI46_20985 RluA family pseudouridine synthase insig. 35 61
  Acinetobacter radioresistens SK82 MPMX26_02477 Dual-specificity RNA pseudouridine synthase RluA insig. 30 69
  Phaeobacter inhibens DSM 17395 PGA1_c33080 ribosomal large subunit pseudouridine synthase A sig. 33 69
  Caulobacter crescentus NA1000 CCNA_01343 ribosomal large subunit pseudouridine synthase C sig. 33 66
  Caulobacter crescentus NA1000 Δfur CCNA_01343 ribosomal large subunit pseudouridine synthase C cofit 33 66
  Methanococcus maripaludis JJ MMJJ_RS09155 RluA family pseudouridine synthase insig. 31 55
  Acidovorax sp. GW101-3H11 Ac3H11_1590 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) strong 31 78
  Desulfovibrio vulgaris Hildenborough JW710 DVU1024 rluD/coaE ribosomal large subunit pseudouridine synthase D/dephospho-CoA kinase (TIGR) insig. 35 54
  Pantoea sp. MT58 IAI47_16060 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 34 71
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF121 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) cofit 31 76
  Pseudomonas stutzeri RCH2 Psest_0709 pseudouridine synthase, RluA family strong 35 51
  Vibrio cholerae E7946 ATCC 55056 CSW01_12700 RNA pseudouridine synthase insig. 31 64
  Castellaniella sp019104865 MT123 ABCV34_RS01885 RluA family pseudouridine synthase strong 29 92
  Azospirillum sp. SherDot2 MPMX19_05442 Ribosomal large subunit pseudouridine synthase D strong 29 81
  Enterobacter sp. TBS_079 MPMX20_02187 Dual-specificity RNA pseudouridine synthase RluA insig. 34 52
  Pseudomonas putida KT2440 PP_1731 23S rRNA (746) and tRNA (32) pseudouridine synthase sig. 32 68
  Acidovorax sp. GW101-3H11 Ac3H11_1787 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) sig. 34 51
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS14830 RluA family pseudouridine synthase insig. 36 53
  Acidovorax sp. GW101-3H11 Ac3H11_174 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) insig. 36 64
  Sinorhizobium meliloti 1021 SMc00647 ribosomal large subunit pseudouridine synthase strong 29 92
  Shewanella sp. ANA-3 Shewana3_1430 pseudouridine synthase (RefSeq) sig. 32 62
  Pseudomonas syringae pv. syringae B728a Psyr_0726 ribosomal large subunit pseudouridine synthase D strong 32 51
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0726 ribosomal large subunit pseudouridine synthase D strong 32 51
  Rahnella sp. WP5 EX31_RS17740 RluA family pseudouridine synthase insig. 35 52
  Variovorax sp. SCN45 GFF988 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) cofit 34 51
  Shewanella loihica PV-4 Shew_1460 pseudouridine synthase (RefSeq) no data 33 62
  Kangiella aquimarina DSM 16071 B158DRAFT_1514 Pseudouridylate synthases, 23S RNA-specific insig. 27 73
  Shewanella sp. ANA-3 Shewana3_0799 ribosomal large subunit pseudouridine synthase A (RefSeq) insig. 32 66
  Klebsiella michiganensis M5al BWI76_RS17615 RNA pseudouridine synthase insig. 35 52
  Serratia liquefaciens MT49 IAI46_03270 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 34 68
  Rahnella sp. WP5 EX31_RS13065 tRNA pseudouridine(65) synthase TruC insig. 34 52
  Pantoea sp. MT58 IAI47_07280 RluA family pseudouridine synthase insig. 33 53
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS03255 pseudouridine synthase insig. 31 71
  Desulfovibrio vulgaris Miyazaki F DvMF_0912 pseudouridine synthase, RluA family (RefSeq) no data 36 51
  Pseudomonas fluorescens SBW25 PFLU_RS03870 23S rRNA pseudouridine(1911/1915/1917) synthase RluD insig. 33 52
  Pseudomonas fluorescens SBW25-INTG PFLU_RS03870 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 33 52
  Synechococcus elongatus PCC 7942 Synpcc7942_1374 rluA ribosomal large subunit pseudouridine synthase D sig. 33 58
  Rhodopseudomonas palustris CGA009 TX73_001905 RluA family pseudouridine synthase strong 33 70
  Pseudomonas simiae WCS417 PS417_03820 ribosomal large subunit pseudouridine synthase D no data 33 52
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1493 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) no data 32 51
  Lysobacter sp. OAE881 ABIE51_RS11800 RluA family pseudouridine synthase cofit 33 58
  Shewanella amazonensis SB2B Sama_0606 pseudouridylate synthase (RefSeq) sig. 32 66
  Ralstonia sp. UNC404CL21Col ABZR87_RS13315 RluA family pseudouridine synthase strong 29 82
  Acidovorax sp. GW101-3H11 Ac3H11_3112 tRNA pseudouridine synthase C (EC 4.2.1.70) insig. 35 68
  Pseudomonas fluorescens FW300-N2C3 AO356_19405 pseudouridine synthase insig. 31 64
  Marinobacter adhaerens HP15 HP15_2221 pseudouridine synthase, RluA family sig. 31 76
  Dickeya dianthicola 67-19 HGI48_RS18175 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 34 52
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2822 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) no data 33 51
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09310 pseudouridylate synthase insig. 32 64
  Rhizobium sp. OAE497 ABIE40_RS14790 RluA family pseudouridine synthase sig. 30 79
  Variovorax sp. SCN45 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) insig. 29 77
  Mycobacterium tuberculosis H37Rv Rv1540 Conserved hypothetical protein member of yabO/yceC/yfiI family no data 34 52
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2616.1 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) sig. 33 58
  Pseudomonas fluorescens FW300-N2E3 AO353_02385 pseudouridine synthase no data 31 64
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5794 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) strong 31 64
  Methanococcus maripaludis S2 MMP_RS05225 RluA family pseudouridine synthase insig. 30 55
  Rhodanobacter sp. FW510-T8 OKGIIK_01790 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 30 86
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_06180 pseudouridylate synthase insig. 35 54
  Dickeya dadantii 3937 DDA3937_RS18240 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 35 55
  Rhodanobacter denitrificans MT42 LRK55_RS04745 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 30 100
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS04965 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 30 100
  Pseudomonas fluorescens FW300-N2E3 AO353_14220 ribosomal large subunit pseudouridine synthase D strong 33 51
  Pseudomonas fluorescens FW300-N2C3 AO356_15925 ribosomal large subunit pseudouridine synthase D strong 33 51
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5127 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) no data 33 51