Homologs of Echvi_1161 from Echinicola vietnamensis KMM 6221, DSM 17526

tRNA and rRNA cytosine-C5-methylases
SEED: Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-)
KEGG: ribosomal RNA small subunit methyltransferase B

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1161 tRNA and rRNA cytosine-C5-methylases insig. 100 100
o Cellulophaga baltica 18 M666_RS18250 methyltransferase domain-containing protein insig. 53 91
  Shewanella loihica PV-4 Shew_1891 Fmu (Sun) domain-containing protein (RefSeq) insig. 54 66
  Shewanella amazonensis SB2B Sama_1664 tRNA and rRNA cytosine-C5-methylase (RefSeq) insig. 55 65
  Shewanella sp. ANA-3 Shewana3_2309 Fmu (Sun) domain-containing protein (RefSeq) insig. 49 75
  Shewanella oneidensis MR-1 SO2215 sun protein, putative (NCBI ptt file) sig. 54 65
  Rhodospirillum rubrum S1H Rru_A0243 tRNA/rRNA cytosine-C5-methylase (NCBI) cofit 37 78
o Dechlorosoma suillum PS Dsui_1543 tRNA/rRNA cytosine-C5-methylase sig. 33 89
o Castellaniella sp019104865 MT123 ABCV34_RS05220 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 35 88
o Herbaspirillum seropedicae SmR1 HSERO_RS05915 SAM-dependent methyltransferase sig. 32 92
o Acidovorax sp. GW101-3H11 Ac3H11_1706 Fmu (Sun) /eukaryotic nucleolar NOL1/Nop2p; tRNA and rRNA cytosine-C5-methylases insig. 35 83
o Paraburkholderia sabiae LMG 24235 QEN71_RS03045 RsmB/NOP family class I SAM-dependent RNA methyltransferase strong 33 92
o Methylophilus sp. DMC18 GFF2298 Ribosomal RNA small subunit methyltransferase B insig. 34 86
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF769 Fmu (Sun) /eukaryotic nucleolar NOL1/Nop2p; tRNA and rRNA cytosine-C5-methylases insig. 34 80
o Paraburkholderia graminis OAS925 ABIE53_003297 16S rRNA (cytosine967-C5)-methyltransferase insig. 33 92
o Burkholderia phytofirmans PsJN BPHYT_RS15665 SAM-dependent methyltransferase no data 33 92
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04074 16S rRNA (cytosine967-C5)-methyltransferase insig. 33 92
o Magnetospirillum magneticum AMB-1 AMB_RS19160 methyltransferase domain-containing protein cofit 31 90
o Synechococcus elongatus PCC 7942 Synpcc7942_0962 sun sun protein sig. 32 86
  Synechocystis sp000284455 PCC 6803 SGL_RS03855 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 37 65
o Azospirillum sp. SherDot2 MPMX19_01594 Ribosomal RNA small subunit methyltransferase B insig. 32 90
o Variovorax sp. OAS795 ABID97_RS07795 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 32 86
  Caulobacter crescentus NA1000 CCNA_01691 tRNA/rRNA methyltransferase strong 36 65
  Caulobacter crescentus NA1000 Δfur CCNA_01691 tRNA/rRNA methyltransferase cofit 36 65
o Cupriavidus basilensis FW507-4G11 RR42_RS17045 SAM-dependent methyltransferase sig. 33 91
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS04755 SAM-dependent methyltransferase strong 32 86
o Ralstonia solanacearum UW163 UW163_RS08915 SAM-dependent methyltransferase insig. 32 86
o Variovorax sp. SCN45 GFF6043 tRNA/rRNA cytosine-C5-methylase insig. 33 82
o Xanthobacter sp. DMC5 GFF12 Ribosomal RNA small subunit methyltransferase B insig. 31 91
o Bosea sp. OAE506 ABIE41_RS15995 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 31 90
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0881 tRNA and rRNA cytosine-C5-methylases insig. 32 86
o Ralstonia sp. UNC404CL21Col ABZR87_RS00375 RsmB/NOP family class I SAM-dependent RNA methyltransferase sig. 33 86
o Ralstonia solanacearum PSI07 RPSI07_RS12630 SAM-dependent methyltransferase insig. 36 65
o Ralstonia solanacearum GMI1000 RS_RS12315 SAM-dependent methyltransferase sig. 32 86
  Shewanella oneidensis MR-1 SO1575 NOL1/NOP2/sun family putative RNA methylase (NCBI ptt file) strong 29 92
  Agrobacterium fabrum C58 Atu0289 Sun protein insig. 36 58
  Alteromonas macleodii MIT1002 MIT1002_00018 Ribosomal RNA small subunit methyltransferase B cofit 32 69
  Rhizobium sp. OAE497 ABIE40_RS01295 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 32 65
o Sphingobium sp. HT1-2 GFF1999 Sun protein cofit 32 86
  Rhodopseudomonas palustris CGA009 TX73_011365 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 34 65
o Dinoroseobacter shibae DFL-12 Dshi_1645 Fmu (Sun) domain protein (RefSeq) sig. 31 90
  Shewanella sp. ANA-3 Shewana3_2867 Fmu (Sun) domain-containing protein (RefSeq) insig. 28 91
  Pectobacterium carotovorum WPP14 HER17_RS02215 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 34 68
  Pseudomonas simiae WCS417 PS417_00085 16S rRNA methyltransferase insig. 33 64
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1914 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) sig. 33 64
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00223 Ribosomal RNA small subunit methyltransferase B cofit 33 64
  Pseudomonas fluorescens SBW25 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 33 64
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB strong 33 64
  Sinorhizobium meliloti 1021 SMc00403 NOL1/NOP2/SUN family signature protein strong 35 58
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4121 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) strong 33 64
  Pseudomonas fluorescens FW300-N2E3 AO353_10630 16S rRNA methyltransferase sig. 33 64
  Enterobacter sp. TBS_079 MPMX20_04196 Ribosomal RNA small subunit methyltransferase B sig. 34 64
  Dickeya dadantii 3937 DDA3937_RS19135 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 33 69
  Pseudomonas orientalis W4I3 QF045_RS03020 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 32 64
  Pseudomonas stutzeri RCH2 Psest_0021 ribosomal RNA small subunit methyltransferase RsmB sig. 32 64
  Shewanella amazonensis SB2B Sama_1086 Fmu (Sun) (RefSeq) strong 28 91
  Marinobacter adhaerens HP15 HP15_3742 Fmu, rRNA SAM-dependent methyltransferase strong 32 70
  Pseudomonas sp. SVBP6 COO64_RS02215 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 33 64
  Pseudomonas fluorescens FW300-N2C3 AO356_11275 16S rRNA methyltransferase strong 33 64
  Pseudomonas segetis P6 ACVTMO_RS01345 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB sig. 32 64
  Pseudomonas fluorescens GW456-L13 PfGW456L13_652 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) sig. 33 64
  Vibrio cholerae E7946 ATCC 55056 CSW01_00225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 33 70
  Pantoea sp. MT58 IAI47_02280 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 32 65
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03035 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 31 81
  Rahnella sp. WP5 EX31_RS15985 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 34 68
  Pseudomonas sp. RS175 PFR28_04663 Ribosomal RNA small subunit methyltransferase B sig. 32 64
  Dickeya dianthicola 67-19 HGI48_RS19225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 33 69
  Erwinia tracheiphila SCR3 LU632_RS22480 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 33 68
  Erwinia amylovora T8 OLJFJH_03720 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 32 65
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2390 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 cofit 33 65
  Kangiella aquimarina DSM 16071 B158DRAFT_0396 ribosomal RNA small subunit methyltransferase RsmB insig. 34 65
  Shewanella amazonensis SB2B Sama_0041 sun protein (RefSeq) strong 34 65
o Phaeobacter inhibens DSM 17395 PGA1_c15230 rRNA methyltransferase-like protein insig. 33 86
  Pseudomonas sp. DMC3 GFF590 Ribosomal RNA small subunit methyltransferase B cofit 32 64
  Xanthobacter sp. DMC5 GFF4611 Ribosomal RNA small subunit methyltransferase B insig. 30 90
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_12470 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 33 68
  Klebsiella pneumoniae MKP103 KDGMDA_06550 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 33 65
  Serratia liquefaciens MT49 IAI46_23275 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 32 68
  Dickeya dianthicola ME23 DZA65_RS20350 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 33 69
  Pseudomonas putida KT2440 PP_0066 Ribosomal RNA small subunit methyltransferase B strong 32 64
  Enterobacter asburiae PDN3 EX28DRAFT_0039 16S rRNA (cytosine(967)-C(5))-methyltransferase cofit 32 64
  Pseudomonas sp. BP01 JOY50_RS08250 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 32 64
o Pseudomonas aeruginosa MRSN321 DY961_RS26285 rsmB;go_function=RNA 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB sig. 32 64
o Pseudomonas aeruginosa PUPa3 DQ20_RS58690 rsmB;go_function=RNA 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB sig. 32 64
  Escherichia fergusonii Becca EFB2_00535 Ribosomal RNA small subunit methyltransferase B insig. 31 65
  Escherichia coli Nissle 1917 ECOLIN_RS18875 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 31 65
o Pseudomonas aeruginosa PA14 IKLFDK_25475 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB strong 32 64
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS22525 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 32 65
  Escherichia coli ECOR38 HEPCGN_16350 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 31 65
  Shewanella loihica PV-4 Shew_2739 Fmu (Sun) domain-containing protein (RefSeq) strong 27 86
  Paraburkholderia graminis OAS925 ABIE53_000392 16S rRNA (cytosine967-C5)-methyltransferase insig. 32 70
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02237 16S rRNA (cytosine967-C5)-methyltransferase insig. 32 70
  Klebsiella michiganensis M5al BWI76_RS25680 16S rRNA m5C967 methyltransferase strong 30 69
  Escherichia coli ECOR27 NOLOHH_09320 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB sig. 30 65
  Escherichia coli ECRC62 BNILDI_02200 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 30 65
  Dechlorosoma suillum PS Dsui_0812 ribosomal RNA small subunit methyltransferase RsmB strong 33 71
  Escherichia coli BL21 ECD_03139 16S rRNA m(5)C967 methyltransferase, SAM-dependent sig. 30 65
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00415 Ribosomal RNA small subunit methyltransferase B strong 30 65
  Escherichia coli BW25113 b3289 rsmB 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) strong 30 65
  Escherichia coli ECRC100 OKFHMN_17520 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 30 65