| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Dickeya dianthicola ME23 | DZA65_RS14535 | | LysR family transcriptional regulator | insig. | 100 | 100 |
| o | Dickeya dianthicola 67-19 | HGI48_RS12725 | | LysR family transcriptional regulator | insig. | 42 | 94 |
| o | Pseudomonas sp. BP01 | JOY50_RS12325 | | LysR family transcriptional regulator | insig. | 41 | 93 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_2945 | | transcriptional regulator, LysR family | insig. | 43 | 94 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2945 | | transcriptional regulator, LysR family | insig. | 43 | 94 |
| o | Rahnella sp. WP5 | EX31_RS15470 | | LysR family transcriptional regulator | insig. | 40 | 93 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS05155 | | LysR family transcriptional regulator | insig. | 40 | 97 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS05155 | | LysR family transcriptional regulator | insig. | 40 | 97 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01223 | | HTH-type transcriptional regulator DmlR | insig. | 39 | 97 |
| o | Pseudomonas sp. SVBP6 | COO64_RS19755 | | LysR substrate-binding domain-containing protein | insig. | 40 | 95 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_989 | | Transcriptional regulator, LysR family | insig. | 39 | 93 |
| o | Serratia liquefaciens MT49 | IAI46_21735 | | LysR family transcriptional regulator | insig. | 38 | 99 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS20290 | | LysR family transcriptional regulator | sig. | 40 | 97 |
| | Pseudomonas sp. BP01 | JOY50_RS23715 | | LysR substrate-binding domain-containing protein | insig. | 40 | 95 |
| o | Pseudomonas putida KT2440 | PP_1615 | | Transcriptional regulator, LysR family | strong | 40 | 95 |
| | Klebsiella michiganensis M5al | BWI76_RS27965 | | LysR family transcriptional regulator | insig. | 40 | 97 |
| | Pseudomonas sp. BP01 | JOY50_RS02245 | | LysR family transcriptional regulator | insig. | 39 | 100 |
| o | Pseudomonas segetis P6 | ACVTMO_RS12405 | | LysR family transcriptional regulator | insig. | 38 | 95 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3107 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | insig. | 41 | 95 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_16575 | | LysR family transcriptional regulator | insig. | 41 | 95 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS12890 | | LysR family transcriptional regulator | insig. | 41 | 96 |
| | Acinetobacter baumannii LAC-4 | RR41_RS10935 | | LysR family transcriptional regulator | insig. | 37 | 97 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS20365 | | LysR family transcriptional regulator | insig. | 36 | 94 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21915 | | LysR family transcriptional regulator | strong | 39 | 95 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4683 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | insig. | 41 | 95 |
| | Rhizobium sp. OAE497 | ABIE40_RS14505 | | LysR family transcriptional regulator | insig. | 38 | 95 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3985 | | Transcriptional regulator | insig. | 39 | 97 |
| o | Pseudomonas sp. DMC3 | GFF2076 | | HTH-type transcriptional regulator DmlR | insig. | 41 | 95 |
| | Enterobacter sp. TBS_079 | MPMX20_00005 | | HTH-type transcriptional regulator PgrR | insig. | 40 | 97 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS42300 | gfnR;inference=COORDINATES | glutathione-dependent formaldehyde neutralization regulator | insig. | 39 | 94 |
| o | Pseudomonas sp. RS175 | PFR28_00419 | | HTH-type transcriptional regulator DmlR | strong | 40 | 95 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS14825 | gfnR;inference=COORDINATES | glutathione-dependent formaldehyde neutralization regulator | insig. | 39 | 94 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_05925 | | LysR family transcriptional regulator | strong | 41 | 95 |
| o | Pseudomonas orientalis W4I3 | QF045_RS09170 | | LysR substrate-binding domain-containing protein | insig. | 39 | 96 |
| | Dickeya dianthicola ME23 | DZA65_RS14555 | | LysR family transcriptional regulator | insig. | 36 | 94 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_18535 | | glutathione-dependent formaldehyde neutralization regulator | insig. | 39 | 94 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01435 | | HTH-type transcriptional regulator DmlR | cofit | 39 | 96 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS06390 | | LysR family transcriptional regulator | insig. | 39 | 96 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS06390 | | LysR family transcriptional regulator | cofit | 39 | 96 |
| o | Pseudomonas stutzeri RCH2 | Psest_2817 | | Transcriptional regulator | insig. | 40 | 96 |
| o | Alteromonas macleodii MIT1002 | MIT1002_03088 | | D-malate degradation protein R | insig. | 38 | 94 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1366 | | transcriptional regulator, LysR family | insig. | 38 | 96 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1366 | | transcriptional regulator, LysR family | insig. | 38 | 96 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3045 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | strong | 40 | 95 |
| | Serratia liquefaciens MT49 | IAI46_07465 | | LysR family transcriptional regulator | insig. | 40 | 94 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS03175 | | LysR family transcriptional regulator | insig. | 39 | 95 |
| o | Ralstonia solanacearum UW163 | UW163_RS10550 | | LysR family transcriptional regulator | insig. | 39 | 95 |
| o | Pseudomonas simiae WCS417 | PS417_06325 | | LysR family transcriptional regulator | strong | 39 | 94 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS09305 | | LysR family transcriptional regulator | insig. | 38 | 91 |
| o | Pseudomonas sp. S08-1 | OH686_18145 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | insig. | 39 | 95 |
| | Pseudomonas segetis P6 | ACVTMO_RS17005 | | LysR substrate-binding domain-containing protein | insig. | 37 | 96 |
| | Erwinia amylovora T8 | OLJFJH_03270 | | LysR family transcriptional regulator | insig. | 38 | 94 |
| | Shewanella loihica PV-4 | Shew_1539 | | LysR family transcriptional regulator (RefSeq) | insig. | 35 | 95 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_22295 | | LysR family transcriptional regulator | insig. | 39 | 92 |
| | Azospirillum sp. SherDot2 | MPMX19_05002 | | HTH-type transcriptional regulator DmlR | insig. | 38 | 95 |
| o | Variovorax sp. OAS795 | ABID97_RS18085 | | LysR family transcriptional regulator | insig. | 39 | 89 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3857 | | Transcriptional regulator, LysR family | insig. | 39 | 92 |
| | Serratia liquefaciens MT49 | IAI46_16195 | | LysR family transcriptional regulator | insig. | 38 | 95 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS13960 | | LysR family transcriptional regulator | cofit | 42 | 93 |
| | Paraburkholderia graminis OAS925 | ABIE53_006367 | | DNA-binding transcriptional LysR family regulator | insig. | 37 | 92 |
| | Rhodospirillum rubrum S1H | Rru_A1041 | | Transcriptional Regulator, LysR family (NCBI) | insig. | 39 | 94 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS02935 | | LysR family transcriptional regulator | insig. | 36 | 94 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00019 | | transcriptional regulator, LysR family | insig. | 36 | 95 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1558 | | transcriptional regulator, LysR family | insig. | 36 | 95 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1558 | | transcriptional regulator, LysR family | insig. | 36 | 95 |
| | Shewanella amazonensis SB2B | Sama_0005 | | LysR, substrate-binding (RefSeq) | insig. | 35 | 94 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_259 | | Transcriptional regulator, LysR family | insig. | 39 | 92 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF461 | | Transcriptional regulator, LysR family | insig. | 38 | 93 |
| | Serratia liquefaciens MT49 | IAI46_16790 | | LysR family transcriptional regulator | insig. | 37 | 95 |
| | Shewanella oneidensis MR-1 | SOA0165 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 36 | 94 |
| | Marinobacter adhaerens HP15 | HP15_936 | | transcriptional regulator, LysR family protein | insig. | 37 | 94 |
| | Paraburkholderia graminis OAS925 | ABIE53_001468 | | DNA-binding transcriptional LysR family regulator | insig. | 36 | 94 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_02650 | | LysR family transcriptional regulator | insig. | 37 | 96 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1549 | | Transcriptional regulator, LysR family | insig. | 36 | 95 |
| | Pseudomonas sp. RS175 | PFR28_02643 | | HTH-type transcriptional regulator DmlR | insig. | 38 | 92 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_21990 | | LysR family transcriptional regulator | insig. | 38 | 92 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_05040 | | LysR family transcriptional regulator | insig. | 35 | 98 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5905 | | Transcriptional regulator, LysR family | insig. | 38 | 92 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS15810 | | LysR family transcriptional regulator | insig. | 37 | 94 |
| | Shewanella oneidensis MR-1 | SO2053 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 37 | 94 |
| | Azospirillum brasilense Sp245 | AZOBR_RS16520 | | LysR family transcriptional regulator | insig. | 36 | 95 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_23640 | | LysR family transcriptional regulator | insig. | 35 | 96 |
| | Pseudomonas sp. DMC3 | GFF943 | | HTH-type transcriptional regulator DmlR | cofit | 37 | 92 |
| | Pseudomonas sp. BP01 | JOY50_RS28305 | | LysR family transcriptional regulator | no data | 35 | 94 |
| | Pseudomonas putida KT2440 | PP_3170 | | Transcriptional regulator, LysR family | insig. | 35 | 94 |
| | Pantoea sp. MT58 | IAI47_20450 | | LysR family transcriptional regulator | insig. | 40 | 94 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS11555 | | LysR family transcriptional regulator | insig. | 37 | 94 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03714 | | transcriptional regulator, LysR family | insig. | 37 | 93 |
| | Pseudomonas simiae WCS417 | PS417_16085 | | LysR family transcriptional regulator | insig. | 39 | 92 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3607 | | transcriptional regulator, LysR family | insig. | 37 | 92 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3607 | | transcriptional regulator, LysR family | insig. | 37 | 92 |
| | Shewanella sp. ANA-3 | Shewana3_1836 | | LysR family transcriptional regulator (RefSeq) | insig. | 36 | 94 |
| | Variovorax sp. SCN45 | GFF5667 | | Transcriptional regulator, LysR family | insig. | 36 | 92 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS12490 | | LysR family transcriptional regulator | insig. | 37 | 94 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS13100 | | LysR family transcriptional regulator | sig. | 37 | 94 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS12790 | | LysR family transcriptional regulator | insig. | 37 | 94 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS18050 | | LysR family transcriptional regulator | insig. | 39 | 92 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS18050 | | LysR family transcriptional regulator | insig. | 39 | 92 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2393 | | Transcriptional regulator, LysR family | insig. | 38 | 94 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_21435 | | LysR family transcriptional regulator | insig. | 36 | 95 |