| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_02520 | | iron-regulated virulence regulatory protein IrgB | insig. | 100 | 100 |
| | Ralstonia solanacearum GMI1000 | RS_RS02710 | | LysR family transcriptional regulator | insig. | 30 | 97 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS09295 | | LysR substrate-binding domain-containing protein | insig. | 30 | 99 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS00610 | | LysR substrate-binding domain-containing protein | cofit | 30 | 99 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS00835 | | LysR substrate-binding domain-containing protein | insig. | 30 | 99 |
| | Variovorax sp. SCN45 | GFF2937 | | Transcriptional regulator, LysR family | insig. | 30 | 98 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS21310 | | LysR family transcriptional regulator | insig. | 29 | 97 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS11890 | | LysR family transcriptional regulator | insig. | 29 | 97 |
| | Ralstonia solanacearum UW163 | UW163_RS01700 | | LysR family transcriptional regulator | insig. | 29 | 97 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS07865 | | LysR family transcriptional regulator | sig. | 29 | 97 |
| | Klebsiella michiganensis M5al | BWI76_RS22630 | | LysR family transcriptional regulator | insig. | 32 | 98 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_06385 | | Transcriptional regulator | insig. | 30 | 99 |
| | Sinorhizobium meliloti 1021 | SMa1720 | | LysR family transcriptional regulator | insig. | 29 | 95 |
| | Azospirillum sp. SherDot2 | MPMX19_03275 | | HTH-type transcriptional regulator PgrR | insig. | 26 | 97 |
| | Serratia liquefaciens MT49 | IAI46_16295 | | LysR family transcriptional regulator | insig. | 30 | 98 |
| | Shewanella amazonensis SB2B | Sama_0401 | | LysR family transcriptional regulator (RefSeq) | strong | 29 | 97 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_05340 | | LysR family transcriptional regulator | cofit | 28 | 95 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_2834 | | Transcriptional regulator | insig. | 31 | 98 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4776 | | LysR-family transcriptional regulator STM2912 | insig. | 29 | 97 |
| | Pseudomonas putida KT2440 | PP_3934 | | Transcriptional regulator, LysR family | insig. | 30 | 98 |
| | Bosea sp. OAE506 | ABIE41_RS06975 | | LysR family transcriptional regulator | insig. | 30 | 100 |
| | Methylophilus sp. DMC18 | GFF2123 | | HTH-type transcriptional regulator PgrR | insig. | 29 | 96 |
| | Rhizobium sp. OAE497 | ABIE40_RS25630 | | LysR family transcriptional regulator | cofit | 27 | 96 |
| | Rhizobium sp. OAE497 | ABIE40_RS16690 | | LysR family transcriptional regulator | insig. | 24 | 97 |
| | Lysobacter sp. OAE881 | ABIE51_RS01040 | | LysR family transcriptional regulator | insig. | 25 | 97 |
| | Shewanella loihica PV-4 | Shew_0028 | | LysR family transcriptional regulator (RefSeq) | insig. | 33 | 63 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_09770 | | LysR family transcriptional regulator | cofit | 27 | 96 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS30065 | | LysR family transcriptional regulator | insig. | 29 | 96 |
| | Variovorax sp. SCN45 | GFF672 | | Transcriptional regulator, LysR family | insig. | 29 | 97 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS04035 | | LysR substrate-binding domain-containing protein | insig. | 27 | 96 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS00190 | | LysR family transcriptional regulator | insig. | 28 | 88 |
| | Serratia liquefaciens MT49 | IAI46_03125 | | LysR family transcriptional regulator | insig. | 28 | 96 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS02115 | | LysR substrate-binding domain-containing protein | insig. | 28 | 99 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_22575 | | LysR family transcriptional regulator | insig. | 27 | 99 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_08310 | | LysR family transcriptional regulator | insig. | 30 | 98 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS01140 | | LysR family transcriptional regulator | cofit | 27 | 96 |
| | Shewanella loihica PV-4 | Shew_2278 | | LysR family transcriptional regulator (RefSeq) | insig. | 28 | 97 |
| | Pseudomonas sp. BP01 | JOY50_RS03910 | | LysR family transcriptional regulator | insig. | 28 | 97 |
| | Pseudomonas sp. S08-1 | OH686_07440 | | Transcriptional regulator, LysR family | insig. | 28 | 98 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS35165 | | LysR family transcriptional regulator | insig. | 27 | 97 |
| | Enterobacter sp. TBS_079 | MPMX20_03624 | | HTH-type transcriptional regulator DmlR | sig. | 30 | 97 |
| | Shewanella sp. ANA-3 | Shewana3_0521 | | LysR family transcriptional regulator (RefSeq) | insig. | 27 | 99 |
| | Pseudomonas simiae WCS417 | PS417_04770 | | LysR family transcriptional regulator | insig. | 27 | 97 |
| | Shewanella oneidensis MR-1 | SO0523 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 27 | 99 |
| | Pseudomonas segetis P6 | ACVTMO_RS19835 | | LysR family transcriptional regulator | insig. | 27 | 98 |
| | Variovorax sp. OAS795 | ABID97_RS28810 | | LysR substrate-binding domain-containing protein | insig. | 31 | 97 |
| | Rahnella sp. WP5 | EX31_RS10405 | | LysR family transcriptional regulator | insig. | 27 | 97 |
| | Shewanella amazonensis SB2B | Sama_2485 | | LysR family transcriptional regulator (RefSeq) | strong | 25 | 99 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_19415 | | LysR family transcriptional regulator | insig. | 24 | 98 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3600 | | Transcriptional regulator | insig. | 26 | 92 |
| | Serratia liquefaciens MT49 | IAI46_19860 | | LysR family transcriptional regulator | insig. | 31 | 97 |
| | Shewanella loihica PV-4 | Shew_0468 | | LysR family transcriptional regulator (RefSeq) | strong | 30 | 96 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_09070 | | LysR family transcriptional regulator | insig. | 27 | 97 |
| | Pseudomonas segetis P6 | ACVTMO_RS22150 | | LysR family transcriptional regulator | insig. | 27 | 98 |
| | Pseudomonas sp. BP01 | JOY50_RS13500 | | LysR family transcriptional regulator | insig. | 25 | 97 |
| | Serratia liquefaciens MT49 | IAI46_11300 | | LysR family transcriptional regulator | insig. | 27 | 91 |
| | Agrobacterium fabrum C58 | Atu5546 | | LysR family transcriptional regulator | insig. | 25 | 96 |
| | Pectobacterium carotovorum WPP14 | HER17_RS02735 | | LysR family transcriptional regulator | insig. | 28 | 98 |
| | Enterobacter sp. TBS_079 | MPMX20_00697 | | HTH-type transcriptional regulator PgrR | insig. | 26 | 92 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS08360 | | LysR family transcriptional regulator | insig. | 26 | 100 |
| | Agrobacterium fabrum C58 | Atu3197 | | LysR family transcriptional regulator | insig. | 25 | 97 |
| | Klebsiella michiganensis M5al | BWI76_RS25460 | | transcriptional regulator | insig. | 25 | 98 |
| | Klebsiella michiganensis M5al | BWI76_RS27670 | | LysR family transcriptional regulator | insig. | 29 | 98 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS21170 | | LysR family transcriptional regulator | insig. | 29 | 91 |
| | Pseudomonas sp. BP01 | JOY50_RS14135 | | LysR family transcriptional regulator | insig. | 27 | 97 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS17675 | ptxR;inference=COORDINATES | HTH-type transcriptional regulator PtxR | insig. | 29 | 97 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_11080 | | HTH-type transcriptional regulator PtxR | sig. | 29 | 97 |
| | Alteromonas macleodii MIT1002 | MIT1002_02674 | | D-malate degradation protein R | strong | 26 | 95 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3589 | | Transcriptional regulator, LysR family | insig. | 26 | 98 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS10455 | | LysR family transcriptional regulator | insig. | 26 | 96 |
| | Variovorax sp. OAS795 | ABID97_RS25295 | | LysR family transcriptional regulator | insig. | 28 | 97 |
| | Sinorhizobium meliloti 1021 | SMa1602 | | LysR family transcriptional regulator | insig. | 27 | 97 |
| | Azospirillum sp. SherDot2 | MPMX19_02806 | | HTH-type transcriptional regulator DmlR | insig. | 27 | 98 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3294 | | Transcriptional regulator | insig. | 24 | 98 |
| | Enterobacter sp. TBS_079 | MPMX20_04149 | | HTH-type transcriptional regulator DmlR | insig. | 24 | 98 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS04600 | | LysR family transcriptional regulator | insig. | 29 | 99 |
| | Azospirillum brasilense Sp245 | AZOBR_RS27500 | | LysR family transcriptional regulator | insig. | 28 | 97 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_715 | | Transcriptional regulator, LysR family, in glycolate utilization operon | sig. | 28 | 100 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1938 | | Transcriptional regulator, LysR family | insig. | 27 | 96 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_19660 | | LysR family transcriptional regulator | insig. | 26 | 97 |
| | Shewanella loihica PV-4 | Shew_3407 | | LysR family transcriptional regulator (RefSeq) | insig. | 26 | 99 |
| | Variovorax sp. OAS795 | ABID97_RS21900 | | LysR family transcriptional regulator | insig. | 28 | 87 |
| | Sinorhizobium meliloti 1021 | SMa1828 | | transcriptional activator | insig. | 28 | 90 |
| | Paraburkholderia graminis OAS925 | ABIE53_004337 | | DNA-binding transcriptional LysR family regulator | insig. | 27 | 96 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_2241 | | transcriptional regulator, LysR family | insig. | 29 | 90 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS39900 | ptxR;inference=COORDINATES | HTH-type transcriptional regulator PtxR | insig. | 29 | 97 |
| | Shewanella sp. ANA-3 | Shewana3_1091 | | LysR family transcriptional regulator (RefSeq) | insig. | 28 | 98 |
| | Rhizobium sp. OAE497 | ABIE40_RS12790 | | LysR family transcriptional regulator | insig. | 27 | 96 |
| | Rhodopseudomonas palustris CGA009 | TX73_017515 | | LysR family transcriptional regulator | insig. | 27 | 82 |
| | Dechlorosoma suillum PS | Dsui_1006 | | transcriptional regulator | insig. | 28 | 79 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS31445 | | LysR family transcriptional regulator | insig. | 27 | 98 |
| | Azospirillum sp. SherDot2 | MPMX19_05002 | | HTH-type transcriptional regulator DmlR | insig. | 27 | 98 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS01420 | | LysR family transcriptional regulator | insig. | 27 | 99 |
| | Pseudomonas segetis P6 | ACVTMO_RS15295 | | LysR family transcriptional regulator | insig. | 26 | 95 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_06240 | | HTH-type transcriptional activator AaeR | insig. | 24 | 98 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS25255 | | LysR family transcriptional regulator | no data | 30 | 97 |
| | Variovorax sp. SCN45 | GFF7309 | | Transcriptional regulator, LysR family | insig. | 27 | 97 |
| | Pseudomonas sp. SVBP6 | COO64_RS08075 | | LysR family transcriptional regulator | insig. | 25 | 92 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01800 | | transcriptional regulator, LysR family | insig. | 27 | 96 |
| | Pseudomonas orientalis W4I3 | QF045_RS07770 | | LysR family transcriptional regulator | cofit | 27 | 97 |