| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Agrobacterium fabrum C58 | Atu3697 | | ATP-dependent protease LA 2 | strong | 100 | 100 |
| o | Rhizobium sp. OAE497 | ABIE40_RS18445 | | LON peptidase substrate-binding domain-containing protein | insig. | 71 | 100 |
| o | Sinorhizobium meliloti 1021 | SMc03802 | | hypothetical protein | sig. | 69 | 98 |
| o | Rhodopseudomonas palustris CGA009 | TX73_001400 | | LON peptidase substrate-binding domain-containing protein | insig. | 58 | 98 |
| o | Bosea sp. OAE506 | ABIE41_RS08295 | | LON peptidase substrate-binding domain-containing protein | insig. | 56 | 99 |
| o | Xanthobacter sp. DMC5 | GFF2506 | | Lon protease 2 | insig. | 57 | 98 |
| o | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS14150 | | LON peptidase substrate-binding domain-containing protein | no data | 54 | 92 |
| o | Caulobacter crescentus NA1000 | CCNA_00108 | | lon endopeptidase-related protein | strong | 50 | 100 |
| o | Caulobacter crescentus NA1000 Δfur | CCNA_00108 | | lon endopeptidase-related protein | cofit | 50 | 100 |
| o | Phaeobacter inhibens DSM 17395 | PGA1_c33240 | | putative ATP-dependent protease La | insig. | 51 | 95 |
| o | Dinoroseobacter shibae DFL-12 | Dshi_0034 | | peptidase S16 lon domain protein (RefSeq) | strong | 50 | 95 |
| o | Magnetospirillum magneticum AMB-1 | AMB_RS00050 | | ATP-dependent protease | cofit | 45 | 97 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS00140 | | peptidase S16 | strong | 47 | 99 |
| o | Azospirillum sp. SherDot2 | MPMX19_01907 | | hypothetical protein | insig. | 48 | 95 |
| o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_2171 | | Uncharacterized protein, similar to the N-terminal domain of Lon protease | insig. | 42 | 93 |
| o | Sphingobium sp. HT1-2 | GFF2474 | | Uncharacterized protein, similar to the N-terminal domain of Lon protease | insig. | 41 | 96 |
| o | Rhodospirillum rubrum S1H | Rru_A3710 | | Peptidase S16, lon-like (NCBI) | insig. | 45 | 97 |
| | Pseudomonas sp. DMC3 | GFF3868 | | hypothetical protein | cofit | 30 | 89 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS13630 | | LON peptidase substrate-binding domain-containing protein | strong | 37 | 48 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1352 | | Uncharacterized protein, similar to the N-terminal domain of Lon protease | insig. | 29 | 89 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2684 | | Uncharacterized protein, similar to the N-terminal domain of Lon protease | insig. | 29 | 89 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_06510 | | ATP-dependent protease | insig. | 29 | 89 |
| | Pseudomonas sp. SVBP6 | COO64_RS15645 | | LON peptidase substrate-binding domain-containing protein | insig. | 29 | 89 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4990 | | Uncharacterized protein, similar to the N-terminal domain of Lon protease | insig. | 29 | 89 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS14555 | | endopeptidase La | strong | 25 | 94 |
| | Pseudomonas sp. RS175 | PFR28_03875 | | hypothetical protein | insig. | 30 | 77 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_0882 | lon | Peptidase S16, lon-like | strong | 31 | 62 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0638 | | Peptidase S16, lon N-terminal | insig. | 30 | 90 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0638 | | Peptidase S16, lon N-terminal | insig. | 30 | 90 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_15275 | | ATP-dependent protease | insig. | 28 | 89 |
| | Variovorax sp. OAS795 | ABID97_RS08410 | | LON peptidase substrate-binding domain-containing protein | insig. | 32 | 61 |
| | Variovorax sp. SCN45 | GFF3879 | | Uncharacterized protein, similar to the N-terminal domain of Lon protease | insig. | 31 | 61 |
| | Shewanella sp. ANA-3 | Shewana3_2464 | | peptidase S16, lon domain-containing protein (RefSeq) | insig. | 28 | 89 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS21705 | | peptidase S16 | insig. | 37 | 44 |
| | Mycobacterium tuberculosis H37Rv | Rv0434 | | Conserved hypothetical protein | insig. | 30 | 87 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_2039 | | Uncharacterized protein, similar to the N-terminal domain of Lon protease | insig. | 26 | 91 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0837 | | ATP-dependent protease (NCBI ptt file) | no data | 25 | 91 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS15670 | | endopeptidase La | cofit | 29 | 55 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS12795 | | LON peptidase substrate-binding domain-containing protein | sig. | 30 | 94 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_20690 | | ATP-dependent protease | insig. | 30 | 94 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS48125 | | LON peptidase substrate-binding domain-containing protein | insig. | 30 | 94 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS16185 | | endopeptidase La | insig. | 29 | 88 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_17025 | | peptidase S16 | insig. | 34 | 46 |
| | Shewanella oneidensis MR-1 | SO1987 | | ATP-dependent protease La (LON) domain protein (NCBI ptt file) | insig. | 36 | 42 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS02880 | | ATP-dependent protease | insig. | 38 | 43 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS17380 | | LON peptidase substrate-binding domain-containing protein | sig. | 43 | 40 |
| | Pseudomonas segetis P6 | ACVTMO_RS05170 | | LON peptidase substrate-binding domain-containing protein | insig. | 34 | 42 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS06350 | | LON peptidase substrate-binding domain-containing protein | insig. | 33 | 46 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS06605 | | LON peptidase substrate-binding domain-containing protein | insig. | 33 | 46 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02571 | | endopeptidase La | strong | 25 | 91 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS01730 | | LON peptidase substrate-binding domain-containing protein | insig. | 37 | 43 |
| | Cellulophaga baltica 18 | M666_RS11425 | | endopeptidase La | strong | 23 | 95 |
| | Alteromonas macleodii MIT1002 | MIT1002_02683 | | hypothetical protein | strong | 35 | 39 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_11720 | | ATP-dependent protease | insig. | 33 | 41 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS11140 | | ATP-dependent protease | insig. | 28 | 83 |
| | Ralstonia solanacearum UW163 | UW163_RS02440 | | ATP-dependent protease | insig. | 28 | 83 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS22160 | | ATP-dependent protease | insig. | 27 | 86 |
| | Pseudomonas sp. S08-1 | OH686_09355 | | Uncharacterized protein, similar to the N-terminal domain of Lon protease | insig. | 35 | 44 |
| | Variovorax sp. OAS795 | ABID97_RS17590 | | endopeptidase La | strong | 24 | 87 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01932 | | hypothetical protein | insig. | 36 | 43 |
| | Pseudomonas sp. BP01 | JOY50_RS17665 | | LON peptidase substrate-binding domain-containing protein | insig. | 35 | 43 |
| | Pseudomonas putida KT2440 | PP_4814 | | ATP-dependent protease La domain protein | strong | 35 | 43 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_05106 | | hypothetical protein | cofit | 28 | 87 |
| | Erwinia tracheiphila SCR3 | LU632_RS18335 | lon | endopeptidase La | no data | 22 | 89 |
| | Paraburkholderia graminis OAS925 | ABIE53_000713 | | Lon protease-like protein | insig. | 36 | 43 |
| | Dechlorosoma suillum PS | Dsui_0994 | | peptidase S16, lon domain protein | insig. | 31 | 87 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS26695 | | ATP-dependent protease | insig. | 27 | 87 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS26695 | | ATP-dependent protease | insig. | 27 | 87 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_16450 | lon | endopeptidase La | no data | 22 | 89 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS07030 | | LON peptidase substrate-binding domain-containing protein | sig. | 27 | 83 |
| | Dechlorosoma suillum PS | Dsui_2198 | | ATP-dependent protease La | strong | 23 | 90 |
| | Pseudomonas orientalis W4I3 | QF045_RS27045 | | LON peptidase substrate-binding domain-containing protein | insig. | 25 | 87 |
| | Dickeya dianthicola 67-19 | HGI48_RS05695 | | endopeptidase La | cofit | 22 | 89 |
| | Dickeya dianthicola ME23 | DZA65_RS06020 | | endopeptidase La | strong | 22 | 89 |
| | Dickeya dadantii 3937 | DDA3937_RS05650 | | endopeptidase La | insig. | 22 | 89 |
| | Ralstonia solanacearum GMI1000 | RS_RS01990 | | ATP-dependent protease | insig. | 28 | 83 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS01805 | | LON peptidase substrate-binding domain-containing protein | insig. | 34 | 42 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_00045 | | endopeptidase La | cofit | 27 | 53 |
| | Pectobacterium carotovorum WPP14 | HER17_RS15840 | | endopeptidase La | no data | 22 | 89 |
| | Rahnella sp. WP5 | EX31_RS22255 | | endopeptidase La | cofit | 22 | 89 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS02055 | | ATP-dependent protease | insig. | 33 | 43 |
| | Pseudomonas simiae WCS417 | PS417_24760 | | ATP-dependent protease | no data | 25 | 87 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS05125 | | endopeptidase La | no data | 24 | 90 |
| | Azospirillum brasilense Sp245 | AZOBR_RS22005 | | Lon protease | insig. | 26 | 88 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS21975 | | endopeptidase La | strong | 22 | 89 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00898 | | ATP-dependent proteinase. Serine peptidase. MEROPS family S16 | no data | 22 | 89 |