Homologs of Atu1803 from Agrobacterium fabrum C58

cold shock protein
SEED: Cold shock protein CspB
KEGG: cold shock protein (beta-ribbon, CspA family)

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Agrobacterium fabrum C58 Atu1803 cold shock protein strong 100 100
o Rhizobium sp. OAE497 ABIE40_RS08740 cold-shock protein no data 86 100
o Sinorhizobium meliloti 1021 SMc00289 cold shock transcription regulator protein no data 82 100
  Rhodopseudomonas palustris CGA009 TX73_013040 cold-shock protein strong 71 87
o Xanthobacter sp. DMC5 GFF888 hypothetical protein insig. 64 90
o Bosea sp. OAE506 ABIE41_RS14945 cold-shock protein no data 60 85
o Caulobacter crescentus NA1000 CCNA_01451 cold shock protein cspD sig. 46 88
o Caulobacter crescentus NA1000 Δfur CCNA_01451 cold shock protein cspD cofit 46 88
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS05885 cold-shock protein insig. 46 81
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3426 Cold shock proteins insig. 42 88
o Phaeobacter inhibens DSM 17395 PGA1_c16790 putative cold shock protein sig. 40 88
o Azospirillum sp. SherDot2 MPMX19_01980 hypothetical protein no data 37 82
o Dinoroseobacter shibae DFL-12 Dshi_1788 cold-shock DNA-binding domain protein (RefSeq) strong 37 81
o Azospirillum brasilense Sp245 AZOBR_RS05440 cold-shock protein insig. 36 82
  Azospirillum brasilense Sp245 AZOBR_RS31150 putative Cold-shock DNA-binding protein (fragment) no data 40 79
  Magnetospirillum magneticum AMB-1 AMB_RS19780 cold-shock protein no data 36 82
  Azospirillum sp. SherDot2 MPMX19_05652 hypothetical protein insig. 34 82
  Azospirillum brasilense Sp245 AZOBR_RS20315 cold-shock protein no data 36 82
  Xanthobacter sp. DMC5 GFF3908 hypothetical protein no data 34 81
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2537 Cold shock proteins no data 34 71
  Sphingobium sp. HT1-2 GFF3676 Cold shock protein of CSP family => dimer no data 36 72
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00535 cold-shock protein no data 44 38
  Escherichia coli BL21 ECD_03406 RNA chaperone and antiterminator, cold-inducible no data 40 35
  Escherichia fergusonii Becca EFB2_00251 Cold shock protein CspA insig. 40 35
  Escherichia coli ECOR27 NOLOHH_07950 cspA Major cold shock protein insig. 40 35
  Escherichia coli ECOR38 HEPCGN_14895 cspA Major cold shock protein insig. 40 35
  Escherichia coli ECRC100 OKFHMN_16005 cspA Major cold shock protein no data 40 35
  Escherichia coli ECRC101 MCAODC_06520 cspA Major cold shock protein insig. 40 35
  Escherichia coli ECRC102 NIAGMN_13765 cspA Major cold shock protein insig. 40 35
  Escherichia coli ECRC62 BNILDI_03595 cspA Major cold shock protein cofit 40 35
  Escherichia coli ECRC98 JDDGAC_19635 cspA Major cold shock protein insig. 40 35
  Escherichia coli ECRC99 KEDOAH_12145 cspA Major cold shock protein no data 40 35
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00150 Cold shock protein CspA insig. 40 35
  Escherichia coli Nissle 1917 ECOLIN_RS20345 RNA chaperone/antiterminator CspA insig. 40 35
  Escherichia coli BW25113 b3556 cspA major cold shock protein (NCBI) no data 40 35
  Klebsiella pneumoniae MKP103 KDGMDA_07710 Major cold shock protein insig. 40 35
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF454 Cold shock protein CspA insig. 40 35
  Enterobacter asburiae PDN3 EX28DRAFT_3819 Cold shock proteins no data 40 35
  Pectobacterium carotovorum WPP14 HER17_RS11745 RNA chaperone/antiterminator CspA no data 44 31
  Castellaniella sp019104865 MT123 ABCV34_RS05315 cold-shock protein insig. 44 33
  Enterobacter sp. TBS_079 MPMX20_00176 Cold shock protein CspA sig. 38 35
  Klebsiella michiganensis M5al BWI76_RS10395 cold-shock protein insig. 44 31
  Klebsiella michiganensis M5al BWI76_RS26980 cold-shock protein sig. 39 35
  Vibrio cholerae E7946 ATCC 55056 CSW01_18795 cold-shock protein CspV insig. 37 35
  Pseudomonas simiae WCS417 PS417_19715 cold-shock protein no data 44 31
  Enterobacter asburiae PDN3 EX28DRAFT_2409 Cold shock proteins no data 42 31
  Enterobacter sp. TBS_079 MPMX20_02529 Cold shock protein CspA sig. 42 31
  Erwinia tracheiphila SCR3 LU632_RS16440 cspE transcription antiterminator/RNA stability regulator CspE no data 42 31
  Erwinia amylovora T8 OLJFJH_17275 transcription antiterminator/RNA stability regulator CspE no data 42 31
o Azospirillum sp. SherDot2 MPMX19_01980 hypothetical protein no data 39 38
  Pantoea sp. MT58 IAI47_14075 transcription antiterminator/RNA stability regulator CspE sig. 38 36
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS03205 transcription antiterminator/RNA stability regulator CspE cofit 38 36
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS20805 RNA chaperone/antiterminator CspA cofit 43 30
  Dickeya dadantii 3937 DDA3937_RS06115 transcription antiterminator/RNA stability regulator CspE no data 36 36
  Dickeya dianthicola 67-19 HGI48_RS06165 transcription antiterminator/RNA stability regulator CspE no data 36 36
  Dickeya dianthicola ME23 DZA65_RS06510 transcription antiterminator/RNA stability regulator CspE insig. 36 36
  Enterobacter asburiae PDN3 EX28DRAFT_2340 Cold shock proteins no data 36 36
  Enterobacter sp. TBS_079 MPMX20_01283 Cold shock-like protein CspE sig. 36 36
  Klebsiella pneumoniae MKP103 KDGMDA_16340 transcription antiterminator/RNA stability regulator CspE strong 36 36
  Klebsiella michiganensis M5al BWI76_RS07980 cold-shock protein no data 42 31
  Escherichia coli BL21 ECD_00593 constitutive cold shock family transcription antitermination protein; negative regulator of cspA transcription; RNA melting protein; ssDNA-binding protein insig. 36 36
  Escherichia fergusonii Becca EFB2_03468 Cold shock-like protein CspE insig. 36 36
  Escherichia coli ECOR27 NOLOHH_23795 cspE transcription antiterminator/RNA stability regulator CspE sig. 36 36
  Escherichia coli ECOR38 HEPCGN_00855 cspE transcription antiterminator/RNA stability regulator CspE sig. 36 36
  Escherichia coli ECRC100 OKFHMN_07420 cspE transcription antiterminator/RNA stability regulator CspE cofit 36 36
  Escherichia coli ECRC101 MCAODC_26635 cspE transcription antiterminator/RNA stability regulator CspE strong 36 36
  Escherichia coli ECRC102 NIAGMN_05475 cspE transcription antiterminator/RNA stability regulator CspE cofit 36 36
  Escherichia coli ECRC62 BNILDI_21805 cspE transcription antiterminator/RNA stability regulator CspE insig. 36 36
  Escherichia coli ECRC98 JDDGAC_11065 cspE transcription antiterminator/RNA stability regulator CspE strong 36 36
  Escherichia coli ECRC99 KEDOAH_20550 cspE transcription antiterminator/RNA stability regulator CspE no data 36 36
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03082 Cold shock-like protein CspE strong 36 36
  Escherichia coli Nissle 1917 ECOLIN_RS03400 transcription antiterminator/RNA stability regulator CspE cofit 36 36
  Escherichia coli BW25113 b0623 cspE cold shock protein E (NCBI) strong 36 36
  Rahnella sp. WP5 EX31_RS23030 transcription antiterminator/RNA stability regulator CspE sig. 36 36
  Pantoea sp. MT58 IAI47_20355 RNA chaperone/antiterminator CspA no data 38 35
  Pantoea sp. MT58 IAI47_20360 RNA chaperone/antiterminator CspA no data 38 35
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS13865 RNA chaperone/antiterminator CspA cofit 38 35
  Shewanella oneidensis MR-1 SO1648 cold shock domain family protein (NCBI ptt file) insig. 38 36
  Burkholderia phytofirmans PsJN BPHYT_RS15270 cold-shock protein no data 47 34
  Pectobacterium carotovorum WPP14 HER17_RS15290 transcription antiterminator/RNA stability regulator CspE cofit 46 26
  Escherichia coli ECOR27 NOLOHH_18435 cspB cold shock-like protein CspB no data 42 31
  Escherichia coli ECOR38 HEPCGN_06335 cspB cold shock-like protein CspB no data 42 31
  Escherichia coli BW25113 b1557 cspB Qin prophage; cold shock protein (NCBI) insig. 42 31
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4536 Cold shock protein CspE no data 42 31
  Alteromonas macleodii MIT1002 MIT1002_03628 Cold shock-like protein CspG cofit 36 36
  Serratia liquefaciens MT49 IAI46_05870 transcription antiterminator/RNA stability regulator CspE insig. 36 36
  Rhizobium sp. OAE497 ABIE40_RS28970 cold-shock protein cofit 49 29
  Vibrio cholerae E7946 ATCC 55056 CSW01_14830 cold-shock protein CspA no data 39 35
  Sinorhizobium meliloti 1021 SMa0126 CspA8 Cold shock family protein insig. 45 29
  Dechlorosoma suillum PS Dsui_0007 cold shock protein insig. 42 32
  Klebsiella michiganensis M5al BWI76_RS10405 cold-shock protein insig. 43 31
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_26210 cspC cold-shock protein no data 41 31
  Erwinia tracheiphila SCR3 LU632_RS19015 cspA RNA chaperone/antiterminator CspA insig. 41 31
  Dechlorosoma suillum PS Dsui_2659 cold shock protein cofit 42 34
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_07125 cspC cold-shock protein no data 39 36
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS18735 cold-shock protein insig. 45 32
  Ralstonia solanacearum GMI1000 RS_RS22215 cold-shock protein sig. 45 32
  Ralstonia solanacearum PSI07 RPSI07_RS04860 cold-shock protein no data 45 32
  Ralstonia solanacearum UW163 UW163_RS20395 cold-shock protein insig. 45 32
  Paraburkholderia sabiae LMG 24235 QEN71_RS02995 cold shock domain-containing protein CspD sig. 42 33