| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Dinoroseobacter shibae DFL-12 | Dshi_0439 | | ATP synthase F0, A subunit (RefSeq) | sig. | 100 | 100 |
| o | Marinobacter adhaerens HP15 | HP15_3993 | | F0F1 ATP synthase subunit A | insig. | 75 | 99 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS27595 | | F0F1 ATP synthase subunit A | no data | 41 | 91 |
| o | Sphingobium sp. HT1-2 | GFF5220 | | Sodium-transporting ATPase subunit B | cofit | 40 | 98 |
| o | Fusobacterium nucleatum SB010 | HUW76_03120 | | F0F1 ATP synthase subunit A | strong | 30 | 99 |
| o | Azospirillum sp. SherDot2 | MPMX19_05035 | | ATP synthase subunit a | insig. | 45 | 86 |
| o | Desulfovibrio vulgaris Hildenborough JW710 | DVU0918 | atpB | ATP synthase F0, A subunit (TIGR) | no data | 35 | 84 |
| o | Desulfovibrio vulgaris Miyazaki F | DvMF_1388 | | ATP synthase F0, A subunit (RefSeq) | no data | 31 | 86 |
| o | Synechococcus elongatus PCC 7942 | Synpcc7942_0331 | atpI | F0F1 ATP synthase subunit A | no data | 35 | 90 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c00710 | | ATP synthase a chain | no data | 30 | 86 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS02700 | | F0F1 ATP synthase subunit A | no data | 33 | 86 |
| | Sinorhizobium meliloti 1021 | SMc00871 | | F0F1 ATP synthase subunit A | no data | 29 | 88 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS20210 | | ATP synthase subunit A | no data | 30 | 74 |
| | Pectobacterium carotovorum WPP14 | HER17_RS21615 | | F0F1 ATP synthase subunit A | no data | 27 | 74 |
| | Rhodospirillum rubrum S1H | Rru_A3246 | | H+-transporting two-sector ATPase, A subunit (NCBI) | no data | 26 | 88 |
| | Dinoroseobacter shibae DFL-12 | Dshi_3030 | | ATP synthase F0, A subunit (RefSeq) | no data | 33 | 75 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1720 | | ATP synthase F0 sector subunit a | no data | 26 | 74 |
| | Mycobacterium tuberculosis H37Rv | Rv1304 | | Probable ATP synthase a chain AtpB (protein 6) | no data | 34 | 63 |
| | Dickeya dianthicola 67-19 | HGI48_RS21395 | | F0F1 ATP synthase subunit A | no data | 25 | 74 |
| | Dickeya dianthicola ME23 | DZA65_RS22375 | | F0F1 ATP synthase subunit A | no data | 25 | 74 |
| | Klebsiella michiganensis M5al | BWI76_RS00215 | | F0F1 ATP synthase subunit A | no data | 26 | 74 |
| | Escherichia coli BL21 | ECD_03622 | | F0 sector of membrane-bound ATP synthase, subunit a | no data | 25 | 74 |
| | Escherichia fergusonii Becca | EFB2_04895 | | ATP synthase subunit a | no data | 25 | 74 |
| | Escherichia coli ECOR27 | NOLOHH_06935 | atpB | F0F1 ATP synthase subunit A | no data | 25 | 74 |
| | Escherichia coli ECOR38 | HEPCGN_13515 | atpB | F0F1 ATP synthase subunit A | no data | 25 | 74 |
| | Escherichia coli ECRC100 | OKFHMN_14800 | atpB | F0F1 ATP synthase subunit A | no data | 25 | 74 |
| | Escherichia coli ECRC101 | MCAODC_05305 | atpB | F0F1 ATP synthase subunit A | no data | 25 | 74 |
| | Escherichia coli ECRC102 | NIAGMN_12555 | atpB | F0F1 ATP synthase subunit A | no data | 25 | 74 |
| | Escherichia coli ECRC62 | BNILDI_04590 | atpB | F0F1 ATP synthase subunit A | no data | 25 | 74 |
| | Escherichia coli ECRC98 | JDDGAC_18420 | atpB | F0F1 ATP synthase subunit A | no data | 25 | 74 |
| | Escherichia coli ECRC99 | KEDOAH_13350 | atpB | F0F1 ATP synthase subunit A | no data | 25 | 74 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04315 | | ATP synthase subunit a | no data | 25 | 74 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS21500 | | F0F1 ATP synthase subunit A | no data | 25 | 74 |
| | Escherichia coli BW25113 | b3738 | atpB | F0F1 ATP synthase subunit A (NCBI) | no data | 25 | 74 |
| | Dickeya dadantii 3937 | DDA3937_RS21590 | | F0F1 ATP synthase subunit A | no data | 25 | 74 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_08825 | | F0F1 ATP synthase subunit A | no data | 26 | 74 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_4014 | | F0F1-type ATP synthase, subunit a | no data | 25 | 84 |
| | Enterobacter sp. TBS_079 | MPMX20_04629 | | ATP synthase subunit a | no data | 25 | 84 |
| | Rhizobium sp. OAE497 | ABIE40_RS05320 | | F0F1 ATP synthase subunit A | no data | 28 | 88 |
| | Rahnella sp. WP5 | EX31_RS06125 | | F0F1 ATP synthase subunit A | no data | 25 | 79 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_14030 | | ATP synthase subunit A | no data | 26 | 74 |
| | Serratia liquefaciens MT49 | IAI46_25125 | | F0F1 ATP synthase subunit A | no data | 25 | 74 |
| | Agrobacterium fabrum C58 | Atu0714 | | ATP synthase A chain | no data | 28 | 88 |
| o | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.4577.1 | | ATP synthase F0 sector subunit a (EC 3.6.3.14) | no data | 28 | 83 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS19050 | | F0F1 ATP synthase subunit A | no data | 25 | 74 |
| | Xanthobacter sp. DMC5 | GFF2502 | | ATP synthase subunit a | no data | 35 | 59 |
| | Pantoea sp. MT58 | IAI47_00285 | | F0F1 ATP synthase subunit A | no data | 25 | 74 |
| | Erwinia tracheiphila SCR3 | LU632_RS24800 | atpB | F0F1 ATP synthase subunit A | no data | 24 | 74 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_09060 | atpB | F0F1 ATP synthase subunit A | no data | 24 | 74 |
| | Erwinia amylovora T8 | OLJFJH_05305 | | F0F1 ATP synthase subunit A | no data | 23 | 74 |
| | Bosea sp. OAE506 | ABIE41_RS22890 | | F0F1 ATP synthase subunit A | no data | 25 | 88 |
| o | Kangiella aquimarina DSM 16071 | B158DRAFT_0382 | | F0F1-type ATP synthase, subunit a | no data | 24 | 89 |
| | Azospirillum sp. SherDot2 | MPMX19_00558 | | ATP synthase subunit a | no data | 26 | 94 |
| | Acinetobacter baumannii LAC-4 | RR41_RS18165 | | F0F1 ATP synthase subunit A | no data | 25 | 74 |
| | Shewanella loihica PV-4 | Shew_3851 | | F0F1 ATP synthase subunit A (RefSeq) | no data | 28 | 74 |
| | Rhodopseudomonas palustris CGA009 | TX73_004360 | | F0F1 ATP synthase subunit A | no data | 27 | 82 |
| | Bifidobacterium breve UCC2003 | BBR_RS11995 | | ATP synthase F0 subunit A | no data | 30 | 73 |
| | Pseudomonas stutzeri RCH2 | Psest_4360 | | F0F1-type ATP synthase, subunit a | no data | 27 | 74 |
| | Acinetobacter radioresistens SK82 | MPMX26_00098 | | ATP synthase subunit a | no data | 25 | 74 |
| | Methylophilus sp. DMC18 | GFF2097 | | ATP synthase subunit a | no data | 26 | 96 |
| | Caulobacter crescentus NA1000 | CCNA_00373 | | ATP synthase A chain | no data | 28 | 76 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_00373 | | ATP synthase A chain | no data | 28 | 76 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3177 | | ATP synthase F0 subcomplex A subunit | no data | 28 | 77 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_16325 | | ATP synthase F0 subunit A | no data | 26 | 94 |
| | Marinobacter adhaerens HP15 | HP15_3685 | | F0F1 ATP synthase subunit A | no data | 26 | 76 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2939 | | ATP synthase F0 sector subunit a | no data | 24 | 75 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS04170 | | F0F1 ATP synthase subunit A | no data | 26 | 93 |
| | Pseudomonas sp. S08-1 | OH686_12685 | | ATP synthase F0, A subunit | no data | 26 | 74 |
| | Alteromonas macleodii MIT1002 | MIT1002_04119 | | F-ATPase subunit 6 | no data | 26 | 74 |
| | Azospirillum brasilense Sp245 | AZOBR_RS05310 | | F0F1 ATP synthase subunit A | no data | 24 | 94 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_15940 | atpB | F0F1 ATP synthase subunit A | no data | 25 | 74 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS13635 | | F0F1 ATP synthase subunit A | no data | 34 | 50 |
| | Shewanella amazonensis SB2B | Sama_3650 | | F0F1 ATP synthase subunit A (RefSeq) | no data | 27 | 74 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS09330 | | F0F1 ATP synthase subunit A | no data | 25 | 74 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS09670 | | F0F1 ATP synthase subunit A | no data | 25 | 74 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS02165 | | F0F1 ATP synthase subunit A | no data | 24 | 74 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS10360 | | F0F1 ATP synthase subunit A | no data | 26 | 77 |
| | Shewanella oneidensis MR-1 | SO4753 | atpB | ATP synthase F0, A subunit (NCBI ptt file) | no data | 25 | 74 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS09375 | | F0F1 ATP synthase subunit A | no data | 28 | 87 |
| | Shewanella sp. ANA-3 | Shewana3_4136 | | F0F1 ATP synthase subunit A (RefSeq) | no data | 25 | 74 |
| | Pseudomonas segetis P6 | ACVTMO_RS01180 | atpB | F0F1 ATP synthase subunit A | no data | 25 | 74 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS15075 | | F0F1 ATP synthase subunit A | cofit | 24 | 94 |
| | Sphingobium sp. HT1-2 | GFF3472 | | ATP synthase F0 sector subunit a (EC 3.6.3.14) | no data | 27 | 79 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS26140 | atpB;go_component=proton-transporting | F0F1 ATP synthase subunit A | no data | 25 | 74 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_25610 | | F0F1 ATP synthase subunit A | no data | 25 | 74 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS58560 | atpB;go_component=proton-transporting | F0F1 ATP synthase subunit A | no data | 25 | 74 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS14985 | | F0F1 ATP synthase subunit A | insig. | 27 | 72 |
| | Pseudomonas sp. BP01 | JOY50_RS08405 | atpB | F0F1 ATP synthase subunit A | no data | 25 | 74 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00169 | | ATP synthase subunit a | no data | 25 | 74 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1938 | | ATP synthase F0 sector subunit a | no data | 25 | 74 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02416 | | ATP synthase F0, A subunit | strong | 27 | 63 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS18075 | | ATP synthase F0 subunit A | no data | 31 | 54 |
| | Pseudomonas sp. SVBP6 | COO64_RS02055 | atpB | F0F1 ATP synthase subunit A | no data | 24 | 74 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0714 | | ATP synthase A subunit (NCBI ptt file) | no data | 28 | 59 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_676 | | ATP synthase F0 sector subunit a | no data | 25 | 74 |
| | Pseudomonas putida KT2440 | PP_5419 | | ATP synthase subunit a | no data | 24 | 74 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS30150 | | F0F1 ATP synthase subunit A | no data | 25 | 74 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS30150 | | F0F1 ATP synthase subunit A | no data | 25 | 74 |
| | Pseudomonas orientalis W4I3 | QF045_RS02880 | | F0F1 ATP synthase subunit A | no data | 24 | 74 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_10420 | | ATP synthase F0F1 subunit A | no data | 24 | 74 |