Homologs of SO1158 from Shewanella oneidensis MR-1

Dps family protein (NCBI ptt file)
SEED: Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1)
KEGG: starvation-inducible DNA-binding protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO1158 Dps family protein (NCBI ptt file) strong 100 100
o Shewanella sp. ANA-3 Shewana3_0985 Ferritin, Dps family protein (RefSeq) sig. 98 100
o Synechococcus elongatus PCC 7942 Synpcc7942_0109 DNA-binding ferritin-like protein (oxidative damage protectant)-like strong 70 98
o Shewanella amazonensis SB2B Sama_2598 Dps family protein (RefSeq) insig. 68 100
o Herbaspirillum seropedicae SmR1 HSERO_RS02145 ferritin insig. 67 98
o Pseudomonas sp. RS175 PFR28_03419 DNA protection during starvation protein 2 sig. 64 99
o Pseudomonas sp. S08-1 OH686_19105 DNA protection during starvation protein insig. 65 99
o Burkholderia phytofirmans PsJN BPHYT_RS03480 ferritin strong 65 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04677 starvation-inducible DNA-binding protein strong 65 99
o Paraburkholderia graminis OAS925 ABIE53_000838 starvation-inducible DNA-binding protein strong 65 99
o Cupriavidus basilensis FW507-4G11 RR42_RS17370 ferritin no data 63 99
o Pseudomonas stutzeri RCH2 Psest_1492 DNA-binding ferritin-like protein (oxidative damage protectant) strong 65 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS26610 Dps family protein insig. 66 95
o Pseudomonas segetis P6 ACVTMO_RS08335 Dps family protein insig. 64 99
o Pseudomonas fluorescens FW300-N2C3 AO356_17990 ferritin sig. 64 98
o Methylophilus sp. DMC18 GFF348 putative protein insig. 64 99
o Rhodospirillum rubrum S1H Rru_A0333 Ferritin and Dps (NCBI) sig. 66 97
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5529 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) insig. 63 98
o Pseudomonas fluorescens SBW25 PFLU_RS24120 DNA starvation/stationary phase protection protein cofit 63 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS24120 DNA starvation/stationary phase protection protein strong 63 98
o Pseudomonas orientalis W4I3 QF045_RS24645 Dps family protein insig. 63 98
o Pseudomonas simiae WCS417 PS417_22480 ferritin insig. 63 98
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04648 hypothetical protein insig. 62 99
o Pseudomonas syringae pv. syringae B728a Psyr_1404 Ferritin and Dps strong 62 98
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1404 Ferritin and Dps strong 62 98
o Pseudomonas sp. DMC3 GFF5191 DNA protection during starvation protein 2 insig. 62 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS01245 Dps family protein strong 64 99
o Pseudomonas sp. BP01 JOY50_RS01850 Dps family protein insig. 62 98
o Pseudomonas sp. SVBP6 COO64_RS20065 Dps family protein insig. 61 98
o Pseudomonas putida KT2440 PP_1210 DNA-binding stress protein insig. 60 99
o Pseudomonas aeruginosa MRSN321 DY961_RS07620 Dps family protein sig. 65 99
o Pseudomonas aeruginosa PA14 IKLFDK_04350 DNA starvation/stationary phase protection protein strong 65 99
o Pseudomonas aeruginosa PUPa3 DQ20_RS45170 Dps family protein strong 65 99
o Azospirillum brasilense Sp245 AZOBR_RS12945 ferritin no data 61 98
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS05595 DNA starvation/stationary phase protection protein cofit 65 95
o Ralstonia solanacearum GMI1000 RS_RS13455 DNA starvation/stationary phase protection protein cofit 65 95
o Ralstonia solanacearum PSI07 RPSI07_RS11705 DNA starvation/stationary phase protection protein strong 65 95
o Ralstonia solanacearum UW163 UW163_RS08030 DNA starvation/stationary phase protection protein insig. 65 95
o Dechlorosoma suillum PS Dsui_0822 DNA-binding ferritin-like protein (oxidative damage protectant) strong 61 99
o Azospirillum sp. SherDot2 MPMX19_02373 DNA protection during starvation protein 2 insig. 60 98
o Rhodopseudomonas palustris CGA009 TX73_014275 DNA starvation/stationary phase protection protein insig. 60 99
o Acinetobacter radioresistens SK82 MPMX26_01495 DNA protection during starvation protein 2 insig. 60 98
o Kangiella aquimarina DSM 16071 B158DRAFT_0476 DNA-binding ferritin-like protein (oxidative damage protectant) strong 58 98
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2804 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) strong 58 99
o Acidovorax sp. GW101-3H11 Ac3H11_786 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) no data 57 99
o Lysobacter sp. OAE881 ABIE51_RS05150 Dps family protein sig. 54 98
o Castellaniella sp019104865 MT123 ABCV34_RS03580 Dps family protein insig. 55 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1478.1 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) sig. 54 98
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS19715 Dps family protein strong 53 98
o Rhodanobacter sp. FW510-T8 OKGIIK_02150 dps DNA-binding ferritin-like protein (oxidative damage protectant) insig. 54 98
o Alteromonas macleodii MIT1002 MIT1002_00525 DNA protection during starvation protein 2 insig. 51 99
o Variovorax sp. OAS795 ABID97_RS01565 DNA starvation/stationary phase protection protein strong 52 100
o Caulobacter crescentus NA1000 CCNA_02966 non-specific DNA-binding protein Dps/iron-binding ferritin-like antioxidant protein/ferroxidase strong 54 99
o Caulobacter crescentus NA1000 Δfur CCNA_02966 non-specific DNA-binding protein Dps/iron-binding ferritin-like antioxidant protein/ferroxidase cofit 54 99
o Variovorax sp. SCN45 GFF5550 DNA protection during starvation protein insig. 51 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS12710 DNA starvation/stationary phase protection protein strong 52 98
o Synechocystis sp000284455 PCC 6803 SGL_RS05855 Dps family protein insig. 50 97
o Rhodanobacter denitrificans MT42 LRK55_RS12415 Dps family protein insig. 52 98
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS15890 DNA starvation/stationary phase protection protein insig. 53 98
o Dickeya dadantii 3937 DDA3937_RS06890 DNA starvation/stationary phase protection protein insig. 41 97
o Dickeya dianthicola ME23 DZA65_RS07220 DNA starvation/stationary phase protection protein insig. 40 97
o Dickeya dianthicola 67-19 HGI48_RS06880 DNA starvation/stationary phase protection protein insig. 39 97
o Dinoroseobacter shibae DFL-12 Dshi_3839 Ferritin Dps family protein (RefSeq) insig. 42 90
o Rhizobium sp. OAE497 ABIE40_RS18810 DNA starvation/stationary phase protection protein insig. 36 99
o Serratia liquefaciens MT49 IAI46_14135 DNA starvation/stationary phase protection protein insig. 36 98
o Phaeobacter inhibens DSM 17395 PGA1_c27100 putative ferritin insig. 41 90
o Xanthobacter sp. DMC5 GFF899 DNA protection during starvation protein 1 insig. 37 93
o Cellulophaga baltica 18 M666_RS06470 DNA starvation/stationary phase protection protein insig. 38 95
o Marinobacter adhaerens HP15 HP15_3253 ferritin-like DNA-binding protein strong 34 97
  Rhodopseudomonas palustris CGA009 TX73_006545 DNA starvation/stationary phase protection protein insig. 40 89
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3726 DNA-binding ferritin-like protein (oxidative damage protectant) strong 38 97
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_12205 DNA starvation/stationary phase protection protein strong 35 97
o Sphingobium sp. HT1-2 GFF3338 DNA protection during starvation protein insig. 37 89
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS05095 DNA starvation/stationary phase protection protein insig. 38 89
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS06705 Dps family protein insig. 33 98
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2678 DNA-binding ferritin-like protein (oxidative damage protectant) strong 36 93
o Bacteroides thetaiotaomicron VPI-5482 BT4715 non-specific DNA-binding protein Dps (NCBI ptt file) sig. 35 94
o Phocaeicola dorei CL03T12C01 ABI39_RS06080 DNA starvation/stationary phase protection protein insig. 36 98
  Rhizobium sp. OAE497 ABIE40_RS25400 DNA starvation/stationary phase protection protein insig. 34 88
  Herbaspirillum seropedicae SmR1 HSERO_RS22570 DNA-binding protein insig. 37 93
o Bacteroides ovatus ATCC 8483 BACOVA_05566 DNA protection during starvation protein insig. 34 94
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS01145 Dps family protein insig. 36 93
o Bacteroides stercoris CC31F HMPREF1181_RS02165 DNA starvation/stationary phase protection protein cofit 35 93
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0586 DNA-binding ferritin-like protein (oxidative damage protectant) strong 34 97
  Rhodanobacter sp. FW510-T8 OKGIIK_14855 dps DNA starvation/stationary phase protection protein insig. 34 88
  Phaeobacter inhibens DSM 17395 PGA1_262p00250 ferritin-like protein sig. 37 93
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS00370 DNA starvation/stationary phase protection protein cofit 33 88
o Agrobacterium fabrum C58 Atu4777 hypothetical protein insig. 36 88
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01103 starvation-inducible DNA-binding protein insig. 38 88
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_13770 DNA starvation/stationary phase protection protein strong 31 98
  Rhodanobacter denitrificans MT42 LRK55_RS07780 DNA starvation/stationary phase protection protein cofit 35 88
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS08030 DNA starvation/stationary phase protection protein insig. 35 88
  Dinoroseobacter shibae DFL-12 Dshi_4223 Ferritin Dps family protein (RefSeq) no data 37 88
  Xanthobacter sp. DMC5 GFF4037 Metalloregulation DNA-binding stress protein insig. 36 88
o Vibrio cholerae E7946 ATCC 55056 CSW01_00700 DNA starvation/stationary phase protection protein cofit 33 81
  Cellulophaga baltica 18 M666_RS10830 DNA starvation/stationary phase protection protein insig. 30 98
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06325 DNA starvation/stationary phase protection protein strong 35 96
  Lysobacter sp. OAE881 ABIE51_RS11955 DNA starvation/stationary phase protection protein insig. 34 88
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_13670 DNA starvation/stationary phase protection protein strong 30 85
  Agrobacterium fabrum C58 Atu2477 DNA oxidation protective protein, not DNA-binding insig. 32 89