Homologs of Rru_A3738 from Rhodospirillum rubrum S1H

Phage integrase (NCBI)
SEED: Tyrosine recombinase XerD
KEGG: integrase/recombinase XerD

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodospirillum rubrum S1H Rru_A3738 Phage integrase (NCBI) no data 100 100
o Magnetospirillum magneticum AMB-1 AMB_RS19880 site-specific tyrosine recombinase XerD cofit 61 91
o Azospirillum sp. SherDot2 MPMX19_02643 Tyrosine recombinase XerD no data 57 92
o Rhizobium sp. OAE497 ABIE40_RS17685 site-specific tyrosine recombinase XerD sig. 51 91
o Sinorhizobium meliloti 1021 SMc00691 site-specific tyrosine recombinase XerD sig. 52 92
o Caulobacter crescentus NA1000 CCNA_03101 site-specific tyrosine recombinase XerD strong 51 92
o Caulobacter crescentus NA1000 Δfur CCNA_03101 site-specific tyrosine recombinase XerD cofit 51 92
o Agrobacterium fabrum C58 Atu3629 site-specific tyrosine recombinase XerD no data 50 93
o Bosea sp. OAE506 ABIE41_RS06100 site-specific tyrosine recombinase XerD strong 54 90
o Xanthobacter sp. DMC5 GFF3081 Tyrosine recombinase XerD no data 52 90
o Rhodopseudomonas palustris CGA009 TX73_002625 site-specific tyrosine recombinase XerD sig. 53 92
o Azospirillum brasilense Sp245 AZOBR_RS03240 recombinase XerD insig. 54 86
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04165 site-specific tyrosine recombinase XerD no data 53 91
o Dinoroseobacter shibae DFL-12 Dshi_1611 integrase family protein (RefSeq) strong 49 91
o Phaeobacter inhibens DSM 17395 PGA1_c14060 tyrosine recombinase XerD strong 48 97
o Rahnella sp. WP5 EX31_RS13480 site-specific tyrosine recombinase XerD strong 43 97
o Lysobacter sp. OAE881 ABIE51_RS04495 site-specific tyrosine recombinase XerD strong 46 89
o Serratia liquefaciens MT49 IAI46_20730 site-specific tyrosine recombinase XerD insig. 44 91
o Klebsiella michiganensis M5al BWI76_RS23815 site-specific tyrosine recombinase XerD no data 46 91
o Klebsiella pneumoniae MKP103 KDGMDA_04300 site-specific tyrosine recombinase XerD sig. 46 91
o Sphingobium sp. HT1-2 GFF2416 Site-specific tyrosine recombinase XerD strong 45 93
o Dickeya dadantii 3937 DDA3937_RS03300 site-specific tyrosine recombinase XerD insig. 44 91
o Pectobacterium carotovorum WPP14 HER17_RS17890 site-specific tyrosine recombinase XerD strong 46 91
o Dechlorosoma suillum PS Dsui_1217 tyrosine recombinase XerD cofit 45 95
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4441.1 Tyrosine recombinase XerD sig. 47 90
o Escherichia coli ECOR38 HEPCGN_18860 xerD site-specific tyrosine recombinase XerD strong 45 91
o Dickeya dianthicola 67-19 HGI48_RS03440 site-specific tyrosine recombinase XerD insig. 44 91
o Dickeya dianthicola ME23 DZA65_RS03485 site-specific tyrosine recombinase XerD no data 44 91
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_03195 xerD site-specific tyrosine recombinase XerD no data 44 91
o Pantoea sp. MT58 IAI47_03820 site-specific tyrosine recombinase XerD strong 43 91
o Erwinia tracheiphila SCR3 LU632_RS05975 xerD site-specific tyrosine recombinase XerD no data 44 90
o Erwinia amylovora T8 OLJFJH_08835 site-specific tyrosine recombinase XerD strong 44 91
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS15880 site-specific tyrosine recombinase XerD cofit 43 91
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2991 Tyrosine recombinase XerD cofit 45 91
o Escherichia coli BL21 ECD_02726 site-specific tyrosine recombinase strong 44 91
o Escherichia fergusonii Becca EFB2_01007 Tyrosine recombinase XerD strong 44 91
o Escherichia coli ECOR27 NOLOHH_11495 xerD site-specific tyrosine recombinase XerD insig. 44 91
o Escherichia coli ECRC100 OKFHMN_19570 xerD site-specific tyrosine recombinase XerD no data 44 91
o Escherichia coli ECRC101 MCAODC_10090 xerD site-specific tyrosine recombinase XerD no data 44 91
o Escherichia coli ECRC62 BNILDI_10025 xerD site-specific tyrosine recombinase XerD insig. 44 91
o Escherichia coli ECRC98 JDDGAC_23210 xerD site-specific tyrosine recombinase XerD no data 44 91
o Escherichia coli ECRC99 KEDOAH_08570 xerD site-specific tyrosine recombinase XerD no data 44 91
o Escherichia coli Nissle 1917 ECOLIN_RS16125 site-specific tyrosine recombinase XerD strong 44 91
o Escherichia coli BW25113 b2894 xerD site-specific tyrosine recombinase XerD (NCBI) strong 44 91
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00821 Tyrosine recombinase XerD sig. 44 90
o Pseudomonas sp. SVBP6 COO64_RS04910 xerD site-specific tyrosine recombinase XerD sig. 44 90
o Pseudomonas sp. S08-1 OH686_17750 tyrosine recombinase XerD insig. 46 89
o Enterobacter asburiae PDN3 EX28DRAFT_2945 tyrosine recombinase XerD insig. 45 91
o Pseudomonas segetis P6 ACVTMO_RS07795 xerD site-specific tyrosine recombinase XerD strong 46 89
o Escherichia coli ECRC102 NIAGMN_17335 xerD site-specific tyrosine recombinase XerD no data 44 91
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1721 Tyrosine recombinase XerD strong 44 90
o Pseudomonas fluorescens FW300-N2E3 AO353_04365 recombinase XerD strong 44 90
o Pseudomonas simiae WCS417 PS417_22895 tyrosine recombinase XerD strong 44 89
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3011 Tyrosine recombinase XerD insig. 44 90
o Pseudomonas aeruginosa MRSN321 DY961_RS14280 xerD;go_function=site-specific site-specific tyrosine recombinase XerD insig. 45 89
o Pseudomonas aeruginosa PA14 IKLFDK_19085 site-specific tyrosine recombinase XerD no data 45 89
o Pseudomonas aeruginosa PUPa3 DQ20_RS42845 xerD;go_function=site-specific site-specific tyrosine recombinase XerD insig. 45 89
o Pseudomonas fluorescens SBW25 PFLU_RS24560 site-specific tyrosine recombinase XerD sig. 44 89
o Pseudomonas fluorescens SBW25-INTG PFLU_RS24560 site-specific tyrosine recombinase XerD strong 44 89
o Pseudomonas sp. DMC3 GFF1987 Tyrosine recombinase XerD insig. 43 90
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04729 Tyrosine recombinase XerD cofit 43 89
o Shewanella amazonensis SB2B Sama_2739 integrase/recombinase XerD (RefSeq) strong 42 96
o Pseudomonas orientalis W4I3 QF045_RS25085 site-specific tyrosine recombinase XerD cofit 44 89
o Vibrio cholerae E7946 ATCC 55056 CSW01_12250 site-specific tyrosine recombinase XerD strong 42 91
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3145 Tyrosine recombinase XerD no data 44 90
o Enterobacter sp. TBS_079 MPMX20_03753 Tyrosine recombinase XerD strong 44 91
o Alteromonas macleodii MIT1002 MIT1002_00786 Tyrosine recombinase XerD insig. 41 90
o Pseudomonas sp. RS175 PFR28_00331 Tyrosine recombinase XerD strong 44 90
o Rhodanobacter denitrificans MT42 LRK55_RS04515 site-specific tyrosine recombinase XerD strong 45 90
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS04735 site-specific tyrosine recombinase XerD insig. 45 90
o Rhodanobacter sp. FW510-T8 OKGIIK_11520 xerD site-specific tyrosine recombinase XerD sig. 45 90
o Pseudomonas fluorescens FW300-N2C3 AO356_06385 recombinase XerD strong 44 90
o Pseudomonas sp. BP01 JOY50_RS11700 xerD site-specific tyrosine recombinase XerD insig. 45 90
o Pseudomonas putida KT2440 PP_1468 Tyrosine recombinase XerD strong 45 90
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS19225 site-specific tyrosine recombinase XerD strong 45 90
o Shewanella loihica PV-4 Shew_0770 tyrosine recombinase XerD (RefSeq) strong 42 90
o Pseudomonas stutzeri RCH2 Psest_3129 tyrosine recombinase XerD insig. 44 89
o Pseudomonas syringae pv. syringae B728a Psyr_1286 tyrosine recombinase XerD subunit sig. 42 89
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1286 tyrosine recombinase XerD subunit sig. 42 89
o Marinobacter adhaerens HP15 HP15_762 site-specific tyrosine recombinase XerD insig. 43 89
o Burkholderia phytofirmans PsJN BPHYT_RS15950 tyrosine recombinase XerD sig. 44 90
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS05285 site-specific tyrosine recombinase XerD insig. 44 89
o Shewanella oneidensis MR-1 SO0950 xerD integrase/recombinase XerD (NCBI ptt file) strong 41 90
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04126 integrase/recombinase XerD no data 44 90
o Paraburkholderia sabiae LMG 24235 QEN71_RS02755 site-specific tyrosine recombinase XerD no data 43 97
o Shewanella sp. ANA-3 Shewana3_3331 tyrosine recombinase XerD (RefSeq) strong 42 90
o Kangiella aquimarina DSM 16071 B158DRAFT_2265 tyrosine recombinase XerD strong 38 90
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3595 Site-specific recombinase XerD sig. 45 91
o Methylophilus sp. DMC18 GFF2342 Tyrosine recombinase XerD insig. 39 91
  Lysobacter sp. OAE881 ABIE51_RS03035 tyrosine recombinase XerC strong 43 92
o Paraburkholderia graminis OAS925 ABIE53_003361 integrase/recombinase XerD strong 43 90
  Dechlorosoma suillum PS Dsui_2597 tyrosine recombinase XerD cofit 41 90
o Bacteroides thetaiotaomicron VPI-5482 BT2843 integrase (NCBI ptt file) strong 36 94
o Acinetobacter baumannii LAC-4 RR41_RS17765 site-specific tyrosine recombinase XerD no data 41 90
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00850 site-specific tyrosine recombinase XerD no data 38 91
o Herbaspirillum seropedicae SmR1 HSERO_RS04265 tyrosine recombinase XerD insig. 40 95
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1809 tyrosine recombinase XerD insig. 38 91
o Bacteroides ovatus ATCC 8483 BACOVA_02123 tyrosine recombinase XerD strong 38 89
  Acinetobacter radioresistens SK82 MPMX26_00169 Tyrosine recombinase XerD no data 45 75
o Phocaeicola dorei CL03T12C01 ABI39_RS07000 site-specific tyrosine recombinase XerD sig. 36 93