Conservation of cofitness between Xcc-8004.1205.1 and Xcc-8004.2318.1 in Xanthomonas campestris pv. campestris strain 8004

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.1205.1 hypothetical protein 1.0 Xcc-8004.2318.1 Argininosuccinate synthase (EC 6.3.4.5) 0.76 15
Lysobacter sp. OAE881 0.82 ABIE51_RS17260 RidA family protein 0.86 ABIE51_RS13405 argininosuccinate synthase 0.89 30
Dyella japonica UNC79MFTsu3.2 0.79 ABZR86_RS11845 RidA family protein 0.86 ABZR86_RS08715 arginosuccinate synthetase (EC 6.3.4.5) (from data) 0.74 69
Rhodanobacter sp. FW510-T8 0.79 OKGIIK_12095 ridA reactive intermediate/imine deaminase 0.87 OKGIIK_09465 argG argininosuccinate synthase low > 52
Rhodanobacter denitrificans FW104-10B01 0.79 LRK54_RS11800 RidA family protein 0.85 LRK54_RS02400 argininosuccinate synthase 0.71 5
Rhodanobacter denitrificans MT42 0.79 LRK55_RS11525 RidA family protein 0.85 LRK55_RS02155 argininosuccinate synthase low > 63
Pseudomonas stutzeri RCH2 0.64 Psest_3818 endoribonuclease L-PSP, putative 0.22 Psest_3121 argininosuccinate synthase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_0208 endoribonuclease L-PSP 0.21 Psyr_3892 argininosuccinate synthase — —
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_0208 endoribonuclease L-PSP 0.21 Psyr_3892 argininosuccinate synthase — —
Marinobacter adhaerens HP15 0.62 HP15_306 YjgF-like protein 0.22 HP15_2367 argininosuccinate synthase — —
Pseudomonas putida KT2440 0.61 PP_5303 aminoacrylate/iminopropionate hydrolase/deaminase 0.21 PP_1088 Argininosuccinate synthase 0.59 30
Dechlorosoma suillum PS 0.61 Dsui_0312 endoribonuclease L-PSP, putative 0.21 Dsui_3248 argininosuccinate synthase — —
Pseudomonas sp. RS175 0.61 PFR28_04425 2-iminobutanoate/2-iminopropanoate deaminase 0.21 PFR28_03353 Argininosuccinate synthase — —
Pseudomonas simiae WCS417 0.61 PS417_27835 endoribonuclease 0.21 PS417_05640 argininosuccinate synthase — —
Pseudomonas fluorescens FW300-N2E2 0.61 Pf6N2E2_4360 Bona fide RidA/YjgF/TdcF/RutC subgroup 0.21 Pf6N2E2_5590 Argininosuccinate synthase (EC 6.3.4.5) — —
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS29515 RidA family protein 0.21 PFLU_RS05725 argininosuccinate synthase — —
Pseudomonas fluorescens SBW25 0.61 PFLU_RS29515 RidA family protein 0.21 PFLU_RS05725 argininosuccinate synthase — —
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_2112 Bona fide RidA/YjgF/TdcF/RutC subgroup 0.21 Pf1N1B4_742 Argininosuccinate synthase (EC 6.3.4.5) 0.72 29
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_12475 reactive intermediate/imine deaminase 0.21 AO356_18325 argininosuccinate synthase 0.36 45
Pseudomonas fluorescens GW456-L13 0.60 PfGW456L13_779 Bona fide RidA/YjgF/TdcF/RutC subgroup 0.20 PfGW456L13_1749 Argininosuccinate synthase (EC 6.3.4.5) 0.65 30
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_09285 reactive intermediate/imine deaminase 0.21 AO353_04105 argininosuccinate synthase 0.52 50
Alteromonas macleodii MIT1002 0.58 MIT1002_00109 Putative reactive intermediate deaminase TdcF 0.23 MIT1002_00468 Argininosuccinate synthase low > 70
Acinetobacter radioresistens SK82 0.57 MPMX26_02797 2-iminobutanoate/2-iminopropanoate deaminase 0.10 MPMX26_02260 Argininosuccinate synthase low > 36
Castellaniella sp019104865 MT123 0.57 ABCV34_RS03565 Rid family detoxifying hydrolase 0.10 ABCV34_RS05390 argininosuccinate synthase — —
Kangiella aquimarina DSM 16071 0.57 B158DRAFT_0573 endoribonuclease L-PSP, putative 0.58 B158DRAFT_1976 argininosuccinate synthase (EC 6.3.4.5) low > 40
Shewanella amazonensis SB2B 0.57 Sama_0263 YjgF-like protein (RefSeq) 0.24 Sama_0259 argininosuccinate synthase (RefSeq) 0.66 41
Pseudomonas sp. S08-1 0.57 OH686_13545 RidA/YER057c/UK114 superfamily protein 0.21 OH686_03930 argininosuccinate synthase low > 80
Azospirillum brasilense Sp245 0.56 AZOBR_RS32435 dfrA 0.23 AZOBR_RS00785 argininosuccinate synthase — —
Shewanella oneidensis MR-1 0.56 SO0358 endoribonuclease L-PSP, putative (NCBI ptt file) 0.24 SO0278 argG argininosuccinate synthase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.56 Shew_3500 putative endoribonuclease L-PSP (RefSeq) 0.22 Shew_0205 argininosuccinate synthase (RefSeq) 0.74 28
Shewanella sp. ANA-3 0.56 Shewana3_3813 putative endoribonuclease L-PSP (RefSeq) 0.24 Shewana3_3902 argininosuccinate synthase (RefSeq) low > 73
Desulfovibrio vulgaris Hildenborough JW710 0.53 DVU2647 endoribonuclease, L-PSP family (TIGR) 0.24 DVU1095 argG argininosuccinate synthase (TIGR) low > 55
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_12735 RidA family protein 0.23 CSW01_13370 argininosuccinate synthase low > 62
Phocaeicola dorei CL03T12C01 0.51 ABI39_RS14715 RidA family protein 0.26 ABI39_RS02975 argininosuccinate synthase low > 72
Phocaeicola vulgatus CL09T03C04 0.51 HMPREF1058_RS18400 RidA family protein 0.26 HMPREF1058_RS08845 argininosuccinate synthase low > 67
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS41190 RidA family protein 0.13 QEN71_RS09235 argininosuccinate synthase — —
Pedobacter sp. GW460-11-11-14-LB5 0.49 CA265_RS22825 reactive intermediate/imine deaminase 0.32 CA265_RS18545 argininosuccinate synthase 0.88 2
Pantoea sp. MT58 0.48 IAI47_16870 2-iminobutanoate/2-iminopropanoate deaminase 0.23 IAI47_00915 argininosuccinate synthase 0.85 26
Parabacteroides merdae CL09T00C40 0.46 HMPREF1078_RS02020 RidA family protein 0.27 HMPREF1078_RS10575 argininosuccinate synthase low > 61
Bacteroides ovatus ATCC 8483 0.44 BACOVA_00589 putative endoribonuclease L-PSP 0.25 BACOVA_03590 putative argininosuccinate synthase 0.62 29
Bacteroides thetaiotaomicron VPI-5482 0.44 BT1336 putative translation initiation inhibitor (NCBI ptt file) 0.25 BT3760 arginosuccinate synthetase (EC 6.3.4.5) (from data) 0.64 37
Erwinia tracheiphila SCR3 0.44 LU632_RS20960 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.23 LU632_RS19605 argininosuccinate synthase 0.56 52
Mucilaginibacter yixingensis YX-36 DSM 26809 0.43 ABZR88_RS17245 RidA family protein 0.29 ABZR88_RS15515 argininosuccinate synthase — —
Desulfovibrio vulgaris Miyazaki F 0.43 DvMF_1512 endoribonuclease L-PSP (RefSeq) 0.25 DvMF_0047 argininosuccinate synthase (RefSeq) — —
Synechococcus elongatus PCC 7942 0.43 Synpcc7942_0972 YjgF-like protein 0.27 Synpcc7942_0009 argG argininosuccinate synthase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.43 Echvi_1327 endoribonuclease L-PSP, putative 0.28 Echvi_3846 argininosuccinate synthase low > 79
Bacteroides stercoris CC31F 0.43 HMPREF1181_RS10885 RidA family protein 0.25 HMPREF1181_RS03460 argininosuccinate synthase low > 56
Serratia liquefaciens MT49 0.42 IAI46_02265 2-iminobutanoate/2-iminopropanoate deaminase 0.23 IAI46_24505 argininosuccinate synthase low > 86
Ralstonia solanacearum UW163 0.39 UW163_RS22060 endoribonuclease L-PSP 0.11 UW163_RS08445 argininosuccinate synthase — —
Ralstonia solanacearum IBSBF1503 0.39 RALBFv3_RS20925 endoribonuclease L-PSP 0.11 RALBFv3_RS05180 argininosuccinate synthase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.38 CA264_17590 RidA family protein 0.27 CA264_06255 argininosuccinate synthase low > 74
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS16710 endoribonuclease L-PSP 0.19 RR42_RS17170 argininosuccinate synthase — —
Bifidobacterium breve UCC2003 0.35 BBR_RS12070 endoribonuclease L-PSP 0.25 BBR_RS13915 argininosuccinate synthase low > 34
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_05869 2-iminobutanoate/2-iminopropanoate deaminase 0.21 H281DRAFT_04120 argininosuccinate synthase low > 103
Sinorhizobium meliloti 1021 0.33 SM_b20377 translation initiation inhibitor protein 0.21 SMc03826 argininosuccinate synthase low > 103
Variovorax sp. OAS795 0.32 ABID97_RS22895 RidA family protein 0.11 ABID97_RS21670 argininosuccinate synthase — —
Dinoroseobacter shibae DFL-12 0.31 Dshi_0720 Endoribonuclease L-PSP (RefSeq) 0.21 Dshi_3472 Argininosuccinate synthase (RefSeq) low > 64
Agrobacterium fabrum C58 0.30 Atu3926 translation initiation inhibitor 0.21 Atu2667 argininosuccinate synthase — —
Azospirillum sp. SherDot2 0.30 MPMX19_04018 2-aminomuconate deaminase 0.23 MPMX19_02369 Argininosuccinate synthase — —
Paraburkholderia graminis OAS925 0.28 ABIE53_000758 reactive intermediate/imine deaminase 0.21 ABIE53_003355 argininosuccinate synthase — —
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS08735 hypothetical protein 0.11 HSERO_RS07180 argininosuccinate synthase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.28 GFF3622 Bona fide RidA/YjgF/TdcF/RutC subgroup 0.11 GFF294 Argininosuccinate synthase (EC 6.3.4.5) — —
Rhizobium sp. OAE497 0.28 ABIE40_RS21405 RidA family protein 0.21 ABIE40_RS18150 argininosuccinate synthase — —
Caulobacter crescentus NA1000 0.27 CCNA_02886 RutC-family pyrimidine utilization protein C 0.20 CCNA_00128 argininosuccinate synthase — —
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_02886 RutC-family pyrimidine utilization protein C 0.20 CCNA_00128 argininosuccinate synthase low > 67
Ralstonia solanacearum GMI1000 0.26 RS_RS24425 RidA family protein 0.11 RS_RS12800 argininosuccinate synthase — —
Ralstonia sp. UNC404CL21Col 0.25 ABZR87_RS17675 RidA family protein 0.11 ABZR87_RS00835 argininosuccinate synthase low > 80
Ralstonia solanacearum PSI07 0.25 RPSI07_RS06815 RidA family protein 0.11 RPSI07_RS12120 argininosuccinate synthase — —
Bosea sp. OAE506 0.22 ABIE41_RS17855 RidA family protein 0.19 ABIE41_RS00340 argininosuccinate synthase — —

Not shown: 24 genomes with orthologs for Xcc-8004.1205.1 only; 11 genomes with orthologs for Xcc-8004.2318.1 only