Conservation of cofitness between RR42_RS04710 and RR42_RS35770 in Cupriavidus basilensis FW507-4G11

78 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS04710 50S rRNA methyltransferase 1.0 RR42_RS35770 flagellar biosynthesis protein FlhB 0.31 10
Ralstonia sp. UNC404CL21Col 0.85 ABZR87_RS15430 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.42 ABZR87_RS18015 flagellar biosynthesis protein FlhB low > 80
Ralstonia solanacearum UW163 0.84 UW163_RS10105 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.42 UW163_RS21685 flagellar type III secretion system protein FlhB — —
Ralstonia solanacearum IBSBF1503 0.84 RALBFv3_RS03565 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.42 RALBFv3_RS17465 flagellar type III secretion system protein FlhB low > 76
Ralstonia solanacearum GMI1000 0.84 RS_RS11015 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.43 RS_RS23850 flagellar type III secretion system protein FlhB — —
Ralstonia solanacearum PSI07 0.84 RPSI07_RS13660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.42 RPSI07_RS06185 flagellar type III secretion system protein FlhB low > 81
Paraburkholderia graminis OAS925 0.76 ABIE53_001541 23S rRNA (pseudouridine1915-N3)-methyltransferase 0.57 ABIE53_000114 flagellar biosynthetic protein FlhB — —
Paraburkholderia sabiae LMG 24235 0.76 QEN71_RS24420 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.52 QEN71_RS28960 flagellar biosynthesis protein FlhB low > 153
Herbaspirillum seropedicae SmR1 0.76 HSERO_RS17780 50S rRNA methyltransferase 0.49 HSERO_RS10140 flagellar biosynthesis protein FlhB low > 78
Paraburkholderia bryophila 376MFSha3.1 0.75 H281DRAFT_04517 23S rRNA (pseudouridine1915-N3)-methyltransferase 0.57 H281DRAFT_05752 flagellar biosynthetic protein FlhB low > 103
Burkholderia phytofirmans PsJN 0.75 BPHYT_RS06385 ribosomal RNA large subunit methyltransferase H 0.59 BPHYT_RS18945 flagellar biosynthesis protein FlhB low > 109
Dechlorosoma suillum PS 0.60 Dsui_0451 hypothetical protein 0.49 Dsui_1722 flagellar biosynthetic protein FlhB low > 51
Castellaniella sp019104865 MT123 0.58 ABCV34_RS02530 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.54 ABCV34_RS05800 flagellar biosynthesis protein FlhB low > 48
Variovorax sp. SCN45 0.57 GFF298 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase (EC 2.1.1.177) 0.56 GFF5770 Flagellar biosynthesis protein FlhB low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.55 GFF4529 LSU m3Psi1915 methyltransferase RlmH 0.36 GFF1432 Flagellar biosynthesis protein FlhB low > 90
Acidovorax sp. GW101-3H11 0.54 Ac3H11_2418 LSU m3Psi1915 methyltransferase RlmH 0.36 Ac3H11_1385 Flagellar biosynthesis protein FlhB low > 79
Marinobacter adhaerens HP15 0.53 HP15_604 conserved hypothetical protein CHP00246 0.39 HP15_2309 flagellar biosynthesis protein FlhB low > 73
Shewanella loihica PV-4 0.50 Shew_2934 SPOUT methyltransferase superfamily protein (RefSeq) 0.41 Shew_1379 flhB flagellar biosynthesis protein FlhB (RefSeq) 0.50 54
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_04865 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.37 CSW01_10580 flagellar biosynthesis protein FlhB low > 62
Erwinia tracheiphila SCR3 0.48 LU632_RS16370 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.44 LU632_RS13510 flhB flagellar type III secretion system protein FlhB low > 74
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS02695 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.38 LRK54_RS13560 flagellar biosynthesis protein FlhB low > 59
Pectobacterium carotovorum WPP14 0.48 HER17_RS15240 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.51 HER17_RS08135 flagellar type III secretion system protein FlhB low > 75
Pantoea sp. MT58 0.48 IAI47_14020 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.46 IAI47_08345 flagellar type III secretion system protein FlhB low > 76
Shewanella amazonensis SB2B 0.48 Sama_2587 rRNA large subunit methyltransferase (RefSeq) 0.38 Sama_2284 flhB flagellar biosynthesis protein FlhB (RefSeq) low > 62
Rhodanobacter denitrificans MT42 0.48 LRK55_RS02450 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.38 LRK55_RS13300 flagellar biosynthesis protein FlhB low > 63
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_03070 Ribosomal RNA large subunit methyltransferase H 0.45 OHPLBJKB_01848 Flagellar biosynthetic protein FlhB — —
Escherichia coli Nissle 1917 0.48 ECOLIN_RS03465 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.45 ECOLIN_RS10740 flagellar biosynthesis protein FlhB — —
Escherichia coli BL21 0.48 ECD_00605 23S rRNA m(3)Psi1915 pseudouridine methyltransferase, SAM-dependent 0.45 ECD_01851 flagellin export apparatus, substrate specificity protein — —
Escherichia coli BW25113 0.48 b0636 ybeA hypothetical protein (NCBI) 0.45 b1880 flhB flagellar biosynthesis protein B (NCBI) low > 76
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_09750 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.36 OKGIIK_02810 flhB flagellar biosynthesis protein FlhB low > 52
Rahnella sp. WP5 0.47 EX31_RS23125 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.43 EX31_RS11345 flagellar type III secretion system protein FlhB low > 89
Dickeya dianthicola ME23 0.47 DZA65_RS06565 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.50 DZA65_RS14040 flagellar type III secretion system protein FlhB low > 75
Dickeya dadantii 3937 0.47 DDA3937_RS06175 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.50 DDA3937_RS13510 flagellar type III secretion system protein FlhB — —
Serratia liquefaciens MT49 0.47 IAI46_05935 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.47 IAI46_16000 flagellar type III secretion system protein FlhB low > 86
Escherichia coli ECRC100 0.47 OKFHMN_07360 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.45 OKFHMN_26165 flhB flagellar biosynthesis protein FlhB low > 80
Escherichia coli ECRC62 0.47 BNILDI_21745 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.45 BNILDI_15395 flhB flagellar biosynthesis protein FlhB — —
Escherichia coli ECOR27 0.47 NOLOHH_23735 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.45 NOLOHH_16605 flhB flagellar biosynthesis protein FlhB low > 75
Shewanella oneidensis MR-1 0.47 SO1169 conserved hypothetical protein TIGR00246 (NCBI ptt file) 0.39 SO3215 flhB flagellar biosynthetic protein FlhB (NCBI ptt file) low > 76
Escherichia coli ECRC98 0.47 JDDGAC_11005 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.45 JDDGAC_00740 flhB flagellar biosynthesis protein FlhB — —
Enterobacter sp. TBS_079 0.47 MPMX20_01295 Ribosomal RNA large subunit methyltransferase H 0.50 MPMX20_02784 Flagellar biosynthetic protein FlhB low > 85
Enterobacter asburiae PDN3 0.47 EX28DRAFT_2327 rRNA large subunit m3Psi methyltransferase RlmH 0.49 EX28DRAFT_0680 flagellar biosynthetic protein FlhB — —
Escherichia coli ECRC99 0.47 KEDOAH_20610 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.45 KEDOAH_01940 flhB flagellar biosynthesis protein FlhB — —
Escherichia coli ECRC102 0.47 NIAGMN_05415 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.45 NIAGMN_01895 flhB flagellar biosynthesis protein FlhB — —
Escherichia coli ECOR38 0.47 HEPCGN_00915 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.45 HEPCGN_04585 flhB flagellar biosynthesis protein FlhB low > 87
Escherichia coli ECRC101 0.47 MCAODC_26575 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.45 MCAODC_19240 flhB flagellar biosynthesis protein FlhB low > 87
Escherichia fergusonii Becca 0.47 EFB2_03456 Ribosomal RNA large subunit methyltransferase H 0.45 EFB2_02063 Flagellar biosynthetic protein FlhB low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF4549 LSU m3Psi1915 methyltransferase RlmH 0.47 GFF1661 Flagellar biosynthesis protein FlhB low > 78
Dickeya dianthicola 67-19 0.47 HGI48_RS06220 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.50 HGI48_RS13555 flagellar type III secretion system protein FlhB — —
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS09055 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.40 ABZR86_RS20245 flagellar biosynthesis protein FlhB low > 74
Shewanella sp. ANA-3 0.47 Shewana3_0996 rRNA large subunit methyltransferase (RefSeq) 0.39 Shewana3_1355 flhB flagellar biosynthesis protein FlhB (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.46 MIT1002_01852 Ribosomal RNA large subunit methyltransferase H 0.33 MIT1002_01098 Flagellar biosynthetic protein FlhB — —
Pseudomonas simiae WCS417 0.43 PS417_24730 50S rRNA methyltransferase 0.39 PS417_19725 flagellar biosynthesis protein FlhB — —
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS26660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.39 PFLU_RS21695 flagellar biosynthesis protein FlhB low > 109
Pseudomonas fluorescens SBW25 0.43 PFLU_RS26660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.39 PFLU_RS21695 flagellar biosynthesis protein FlhB low > 109
Pseudomonas sp. RS175 0.43 PFR28_03869 Ribosomal RNA large subunit methyltransferase H 0.37 PFR28_00848 Flagellar biosynthetic protein FlhB low > 88
Lysobacter sp. OAE881 0.43 ABIE51_RS06755 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.41 ABIE51_RS16845 flagellar biosynthesis protein FlhB low > 62
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_15305 50S rRNA methyltransferase 0.37 AO356_03755 flagellar biosynthetic protein FlhB low > 104
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_4996 LSU m3Psi1915 methyltransferase RlmH 0.38 Pf6N2E2_2577 Flagellar biosynthesis protein FlhB low > 103
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_4366 Protein of unknown function DUF163 0.40 Psyr_3441 Flagellar biosynthetic protein FlhB — —
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_06480 50S rRNA methyltransferase 0.36 AO353_18760 flagellar biosynthetic protein FlhB low > 101
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_2691 LSU m3Psi1915 methyltransferase RlmH 0.41 Pf1N1B4_3621 Flagellar biosynthesis protein FlhB — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_4366 Protein of unknown function DUF163 0.40 Psyr_3441 Flagellar biosynthetic protein FlhB low > 86
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_1359 LSU m3Psi1915 methyltransferase RlmH 0.41 PfGW456L13_4336 Flagellar biosynthesis protein FlhB low > 87
Pseudomonas stutzeri RCH2 0.42 Psest_0511 rRNA large subunit m3Psi methyltransferase RlmH 0.42 Psest_1735 flagellar biosynthetic protein FlhB low > 67
Pseudomonas sp. S08-1 0.42 OH686_09325 rRNA large subunit m3Psi methyltransferase RlmH 0.42 OH686_02755 flagellar biosynthetic protein FlhB low > 80
Pseudomonas putida KT2440 0.42 PP_4808 23S rRNA m3psi1915 methyltransferase 0.35 PP_4352 flagellin export apparatus, substrate specificity protein low > 96
Magnetospirillum magneticum AMB-1 0.38 AMB_RS20655 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.31 AMB_RS03190 flagellar biosynthesis protein FlhB low > 64
Azospirillum brasilense Sp245 0.38 AZOBR_RS04060 50S rRNA methyltransferase 0.32 AZOBR_RS11110 flagellar biosynthesis protein low > 97
Xanthomonas campestris pv. campestris strain 8004 0.37 Xcc-8004.1876.1 LSU m3Psi1915 methyltransferase RlmH 0.39 Xcc-8004.2827.1 Flagellar biosynthesis protein FlhB — —
Azospirillum sp. SherDot2 0.37 MPMX19_01940 Ribosomal RNA large subunit methyltransferase H 0.30 MPMX19_00867 Flagellar biosynthetic protein FlhB low > 112
Sinorhizobium meliloti 1021 0.34 SMc03781 rRNA large subunit methyltransferase 0.24 SMc03018 flagellar biosynthesis protein FlhB low > 103
Agrobacterium fabrum C58 0.33 Atu2776 hypothetical protein 0.26 Atu0564 flagellar biosynthetic protein low > 89
Rhizobium sp. OAE497 0.33 ABIE40_RS18965 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.25 ABIE40_RS02930 flagellar biosynthesis protein FlhB low > 107
Rhodopseudomonas palustris CGA009 0.28 TX73_000870 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.30 TX73_020135 flagellar biosynthesis protein FlhB low > 86
Rhodospirillum rubrum S1H 0.26 Rru_A1235 Protein of unknown function DUF163 (NCBI) 0.28 Rru_A2821 Flagellar biosynthetic protein FlhB (NCBI) low > 58
Sphingomonas koreensis DSMZ 15582 0.24 Ga0059261_2503 Predicted SPOUT methyltransferase 0.28 Ga0059261_2059 Flagellar biosynthesis pathway, component FlhB low > 68
Desulfovibrio vulgaris Miyazaki F 0.24 DvMF_0845 protein of unknown function DUF163 (RefSeq) 0.27 DvMF_2015 flhB flagellar biosynthesis protein FlhB (RefSeq) low > 51
Brevundimonas sp. GW460-12-10-14-LB2 0.23 A4249_RS14825 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.26 A4249_RS15235 flagellar biosynthesis protein FlhB low > 48
Desulfovibrio vulgaris Hildenborough JW710 0.23 DVU1254 conserved hypothetical protein (TIGR) 0.29 DVU3233 flhB flagellar biosynthetic protein FlhB (TIGR) low > 55

Not shown: 16 genomes with orthologs for RR42_RS04710 only; 5 genomes with orthologs for RR42_RS35770 only