Conservation of cofitness between QEN71_RS01725 and QEN71_RS25435 in Paraburkholderia sabiae LMG 24235

76 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS01725 A/G-specific adenine glycosylase 1.0 QEN71_RS25435 UDP-glucose 4-epimerase GalE 0.47 13
Paraburkholderia bryophila 376MFSha3.1 0.83 H281DRAFT_01933 A/G-specific DNA-adenine glycosylase 0.87 H281DRAFT_00074 UDP-galactose 4-epimerase low > 103
Paraburkholderia graminis OAS925 0.83 ABIE53_000712 A/G-specific adenine glycosylase 0.88 ABIE53_001185 UDP-glucose 4-epimerase low > 113
Burkholderia phytofirmans PsJN 0.81 BPHYT_RS02875 adenine glycosylase 0.88 BPHYT_RS04450 UDP-glucose 4-epimerase low > 109
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS19540 adenine glycosylase 0.63 HSERO_RS22045 UDP-glucose 4-epimerase low > 78
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS11135 A/G-specific adenine glycosylase 0.66 RALBFv3_RS18435 UDP-glucose 4-epimerase GalE low > 76
Ralstonia solanacearum PSI07 0.54 RPSI07_RS22165 A/G-specific adenine glycosylase 0.67 RPSI07_RS05120 UDP-glucose 4-epimerase GalE low > 81
Ralstonia solanacearum UW163 0.54 UW163_RS02445 A/G-specific adenine glycosylase 0.66 UW163_RS20695 UDP-glucose 4-epimerase GalE — —
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS02050 adenine glycosylase 0.66 RR42_RS35875 UDP-galactose-4-epimerase low > 128
Ralstonia solanacearum GMI1000 0.53 RS_RS01985 A/G-specific adenine glycosylase 0.67 RS_RS22435 UDP-glucose 4-epimerase GalE low > 80
Ralstonia sp. UNC404CL21Col 0.52 ABZR87_RS07025 A/G-specific adenine glycosylase 0.67 ABZR87_RS19470 UDP-glucose 4-epimerase GalE low > 80
Dechlorosoma suillum PS 0.52 Dsui_0998 A/G-specific adenine glycosylase 0.57 Dsui_0398 UDP-glucose-4-epimerase low > 51
Shewanella oneidensis MR-1 0.48 SO3368 mutY A/G-specific adenine glycosylase (NCBI ptt file) 0.62 SO1664 galE UDP-glucose 4-epimerase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.48 Shewana3_1181 A/G-specific DNA-adenine glycosylase (RefSeq) 0.63 Shewana3_2783 UDP-galactose 4-epimerase (RefSeq) low > 73
Pseudomonas putida KT2440 0.48 PP_0286 adenine glycosylase 0.29 PP_3129 UDP-glucose 4-epimerase low > 96
Shewanella amazonensis SB2B 0.47 Sama_2490 A/G-specific adenine glycosylase (RefSeq) 0.63 Sama_2224 UDP-glucose 4-epimerase (RefSeq) low > 62
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_12050 A/G-specific adenine glycosylase 0.34 AO353_21135 UDP-galactose-4-epimerase low > 101
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_1631 A/G-specific adenine glycosylase (EC 3.2.2.-) 0.50 Pf1N1B4_5092 UDP-glucose 4-epimerase (EC 5.1.3.2) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_4901 A/G-specific DNA-adenine glycosylase 0.52 Psyr_2704 UDP-galactose 4-epimerase low > 86
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_4901 A/G-specific DNA-adenine glycosylase 0.52 Psyr_2704 UDP-galactose 4-epimerase low > 86
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS13325 A/G-specific adenine glycosylase 0.31 LRK54_RS17395 UDP-glucose 4-epimerase GalE low > 59
Rhodanobacter denitrificans MT42 0.46 LRK55_RS13065 A/G-specific adenine glycosylase 0.31 LRK55_RS17620 UDP-glucose 4-epimerase GalE low > 63
Escherichia coli ECRC62 0.45 BNILDI_09645 mutY A/G-specific adenine glycosylase 0.56 BNILDI_20120 galE UDP-glucose 4-epimerase GalE low > 75
Escherichia coli ECRC101 0.45 MCAODC_09720 mutY A/G-specific adenine glycosylase 0.54 MCAODC_25935 galE UDP-glucose 4-epimerase GalE low > 87
Escherichia coli ECRC99 0.45 KEDOAH_08940 mutY A/G-specific adenine glycosylase 0.55 KEDOAH_21250 galT galactose-1-phosphate uridylyltransferase — —
Escherichia coli ECRC100 0.45 OKFHMN_19200 mutY A/G-specific adenine glycosylase 0.55 OKFHMN_06715 galT galactose-1-phosphate uridylyltransferase low > 80
Escherichia coli ECOR27 0.45 NOLOHH_11060 mutY A/G-specific adenine glycosylase 0.55 NOLOHH_23145 galE UDP-glucose 4-epimerase GalE low > 75
Escherichia coli ECRC98 0.45 JDDGAC_22830 mutY A/G-specific adenine glycosylase 0.55 JDDGAC_10370 galT galactose-1-phosphate uridylyltransferase low > 86
Escherichia coli ECRC102 0.45 NIAGMN_16965 mutY A/G-specific adenine glycosylase 0.55 NIAGMN_04765 galT galactose-1-phosphate uridylyltransferase — —
Escherichia coli BW25113 0.45 b2961 mutY adenine DNA glycosylase (NCBI) 0.55 b0759 galE UDP-galactose-4-epimerase (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_00755 Adenine DNA glycosylase 0.55 OHPLBJKB_02954 UDP-glucose 4-epimerase low > 73
Escherichia fergusonii Becca 0.45 EFB2_00941 Adenine DNA glycosylase 0.55 EFB2_03347 UDP-glucose 4-epimerase low > 86
Escherichia coli ECOR38 0.45 HEPCGN_18470 mutY A/G-specific adenine glycosylase 0.55 HEPCGN_01560 galT galactose-1-phosphate uridylyltransferase low > 87
Shewanella loihica PV-4 0.45 Shew_1123 A/G-specific adenine glycosylase (RefSeq) 0.65 Shew_1433 UDP-glucose 4-epimerase (RefSeq) low > 60
Enterobacter asburiae PDN3 0.45 EX28DRAFT_2998 A/G-specific DNA-adenine glycosylase (EC 3.2.2.-) 0.55 EX28DRAFT_2236 UDP-glucose-4-epimerase GalE low > 76
Escherichia coli Nissle 1917 0.45 ECOLIN_RS16470 A/G-specific adenine glycosylase 0.55 ECOLIN_RS04040 UDP-glucose 4-epimerase GalE low > 55
Marinobacter adhaerens HP15 0.45 HP15_3015 A/G-specific adenine glycosylase-like protein 0.32 HP15_2048 UDP-glucose 4-epimerase low > 73
Alteromonas macleodii MIT1002 0.45 MIT1002_00239 A/G-specific adenine glycosylase 0.62 MIT1002_00970 UDP-glucose 4-epimerase low > 70
Vibrio cholerae E7946 ATCC 55056 0.44 CSW01_02410 adenine DNA glycosylase 0.58 CSW01_18045 UDP-glucose 4-epimerase GalE low > 62
Castellaniella sp019104865 MT123 0.44 ABCV34_RS10845 A/G-specific adenine glycosylase 0.60 ABCV34_RS10235 UDP-glucose 4-epimerase GalE low > 48
Variovorax sp. SCN45 0.44 GFF2355 A/G-specific adenine glycosylase (EC 3.2.2.-) 0.53 GFF68 UDP-glucose 4-epimerase (EC 5.1.3.2) low > 127
Dickeya dadantii 3937 0.44 DDA3937_RS04900 A/G-specific adenine glycosylase 0.53 DDA3937_RS06615 UDP-glucose 4-epimerase GalE low > 74
Pectobacterium carotovorum WPP14 0.44 HER17_RS16625 A/G-specific adenine glycosylase 0.54 HER17_RS14765 UDP-glucose 4-epimerase GalE low > 75
Enterobacter sp. TBS_079 0.44 MPMX20_03818 Adenine DNA glycosylase 0.55 MPMX20_01386 UDP-glucose 4-epimerase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF3065 A/G-specific adenine glycosylase (EC 3.2.2.-) 0.55 GFF652 UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) / UDP-glucose 4-epimerase (EC 5.1.3.2) low > 78
Dickeya dianthicola ME23 0.44 DZA65_RS05245 A/G-specific adenine glycosylase 0.52 DZA65_RS06990 UDP-glucose 4-epimerase GalE low > 75
Erwinia tracheiphila SCR3 0.43 LU632_RS05420 mutY A/G-specific adenine glycosylase 0.55 LU632_RS08830 galE UDP-glucose 4-epimerase GalE low > 74
Serratia liquefaciens MT49 0.43 IAI46_21465 A/G-specific adenine glycosylase 0.56 IAI46_05365 UDP-glucose 4-epimerase GalE low > 86
Pantoea sp. MT58 0.43 IAI47_03560 A/G-specific adenine glycosylase 0.56 IAI47_07000 UDP-glucose 4-epimerase GalE low > 76
Pseudomonas stutzeri RCH2 0.43 Psest_0145 A/G-specific adenine glycosylase 0.55 Psest_0069 UDP-glucose-4-epimerase low > 67
Rahnella sp. WP5 0.43 EX31_RS02735 A/G-specific adenine glycosylase 0.55 EX31_RS23580 UDP-glucose 4-epimerase GalE low > 89
Lysobacter sp. OAE881 0.43 ABIE51_RS15140 A/G-specific adenine glycosylase 0.57 ABIE51_RS07955 UDP-glucose 4-epimerase GalE low > 62
Variovorax sp. OAS795 0.43 ABID97_RS23715 A/G-specific adenine glycosylase 0.54 ABID97_RS05765 UDP-glucose 4-epimerase GalE low > 91
Dickeya dianthicola 67-19 0.43 HGI48_RS04910 A/G-specific adenine glycosylase 0.52 HGI48_RS06635 UDP-glucose 4-epimerase GalE low > 71
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF827 A/G-specific adenine glycosylase (EC 3.2.2.-) 0.58 GFF3323 UDP-glucose 4-epimerase (EC 5.1.3.2) low > 90
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.2122.1 A/G-specific adenine glycosylase (EC 3.2.2.-) 0.53 Xcc-8004.4678.1 UDP-glucose 4-epimerase (EC 5.1.3.2) low > 74
Acinetobacter radioresistens SK82 0.37 MPMX26_02995 Adenine DNA glycosylase 0.55 MPMX26_00066 UDP-glucose 4-epimerase low > 36
Synechococcus elongatus PCC 7942 0.34 Synpcc7942_0673 mutT A/G-specific DNA-adenine glycosylase 0.37 Synpcc7942_0320 galE UDP-galactose 4-epimerase — —
Bosea sp. OAE506 0.32 ABIE41_RS22845 A/G-specific adenine glycosylase 0.30 ABIE41_RS08585 UDP-glucose 4-epimerase GalE — —
Azospirillum brasilense Sp245 0.31 AZOBR_RS20275 adenine glycosylase 0.33 AZOBR_RS22395 UDP-glucose 4-epimerase low > 97
Azospirillum sp. SherDot2 0.31 MPMX19_04892 Adenine DNA glycosylase 0.33 MPMX19_04151 UDP-glucose 4-epimerase low > 112
Rhodopseudomonas palustris CGA009 0.31 TX73_023285 A/G-specific adenine glycosylase 0.32 TX73_023800 UDP-glucose 4-epimerase GalE low > 86
Agrobacterium fabrum C58 0.30 Atu0798 A/G-specific adenine glycosylase 0.36 Atu4166 UDP-glucose 4-epimerase low > 89
Sinorhizobium meliloti 1021 0.30 SMc00452 A/G-specific adenine glycosylase 0.34 SM_b20942 UDP glucose 4-epimerase low > 103
Mucilaginibacter yixingensis YX-36 DSM 26809 0.30 ABZR88_RS20430 A/G-specific adenine glycosylase 0.47 ABZR88_RS08705 UDP-glucose 4-epimerase GalE low > 71
Pontibacter actiniarum KMM 6156, DSM 19842 0.29 CA264_14995 A/G-specific adenine glycosylase 0.46 CA264_17905 UDP-glucose 4-epimerase GalE 0.44 49
Desulfovibrio vulgaris Hildenborough JW710 0.29 DVU0282 mutY A/G-specific adenine glycosylase (TIGR) 0.34 DVU1360 galE UDP-glucose 4-epimerase (TIGR) low > 55
Pedobacter sp. GW460-11-11-14-LB5 0.29 CA265_RS22680 A/G-specific adenine glycosylase 0.45 CA265_RS25430 UDP-glucose 4-epimerase GalE — —
Bacteroides ovatus ATCC 8483 0.28 BACOVA_04228 A/G-specific adenine glycosylase 0.45 BACOVA_02242 UDP-glucose 4-epimerase — —
Rhizobium sp. OAE497 0.28 ABIE40_RS04290 A/G-specific adenine glycosylase 0.37 ABIE40_RS18880 UDP-glucose 4-epimerase GalE 0.50 60
Desulfovibrio vulgaris Miyazaki F 0.28 DvMF_1921 A/G-specific adenine glycosylase (RefSeq) 0.28 DvMF_0137 UDP-glucose 4-epimerase (RefSeq) low > 51
Parabacteroides merdae CL09T00C40 0.27 HMPREF1078_RS14175 A/G-specific adenine glycosylase 0.45 HMPREF1078_RS15420 UDP-glucose 4-epimerase GalE — —
Sphingomonas koreensis DSMZ 15582 0.26 Ga0059261_2317 A/G-specific DNA-adenine glycosylase (EC 3.2.2.-) 0.31 Ga0059261_1305 UDP-glucose-4-epimerase GalE — —
Caulobacter crescentus NA1000 0.25 CCNA_00381 A/G-specific adenine DNA glycosylase 0.34 CCNA_00090 UDP-glucose 4-epimerase low > 66
Caulobacter crescentus NA1000 Δfur 0.25 CCNA_00381 A/G-specific adenine DNA glycosylase 0.34 CCNA_00090 UDP-glucose 4-epimerase low > 67
Phaeobacter inhibens DSM 17395 0.25 PGA1_c33540 A/G-specific adenine glycosylase MutY 0.31 PGA1_c34470 UDP-glucose 4-epimerase ExoB low > 62
Dinoroseobacter shibae DFL-12 0.24 Dshi_0028 A/G-specific adenine glycosylase (RefSeq) 0.50 Dshi_3868 UDP-glucose 4-epimerase (RefSeq) low > 64

Not shown: 17 genomes with orthologs for QEN71_RS01725 only; 8 genomes with orthologs for QEN71_RS25435 only