Conservation of cofitness between QEN71_RS02745 and QEN71_RS06085 in Paraburkholderia sabiae LMG 24235

79 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS02745 tRNA epoxyqueuosine(34) reductase QueG 1.0 QEN71_RS06085 DNA mismatch repair protein MutS 0.61 2
Paraburkholderia graminis OAS925 0.76 ABIE53_003363 epoxyqueuosine reductase 0.87 ABIE53_002719 DNA mismatch repair protein MutS low > 113
Paraburkholderia bryophila 376MFSha3.1 0.75 H281DRAFT_04128 epoxyqueuosine reductase 0.88 H281DRAFT_00537 DNA mismatch repair protein MutS low > 103
Burkholderia phytofirmans PsJN 0.75 BPHYT_RS15960 iron-sulfur cluster binding protein 0.88 BPHYT_RS12475 DNA mismatch repair protein MutS low > 109
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS04220 epoxyqueuosine reductase 0.59 HSERO_RS16360 DNA mismatch repair protein MutS low > 78
Ralstonia solanacearum UW163 0.54 UW163_RS08505 tRNA epoxyqueuosine(34) reductase QueG 0.64 UW163_RS12390 DNA mismatch repair protein MutS — —
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS05120 tRNA epoxyqueuosine(34) reductase QueG 0.64 RALBFv3_RS14920 DNA mismatch repair protein MutS low > 76
Ralstonia solanacearum PSI07 0.54 RPSI07_RS12175 tRNA epoxyqueuosine(34) reductase QueG 0.65 RPSI07_RS18440 DNA mismatch repair protein MutS low > 81
Ralstonia solanacearum GMI1000 0.54 RS_RS12740 tRNA epoxyqueuosine(34) reductase QueG 0.64 RS_RS05735 DNA mismatch repair protein MutS low > 80
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS03405 epoxyqueuosine reductase 0.65 RR42_RS06285 DNA mismatch repair protein MutS low > 128
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS00775 tRNA epoxyqueuosine(34) reductase QueG 0.65 ABZR87_RS10580 DNA mismatch repair protein MutS low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF5474 Epoxyqueuosine (oQ) reductase QueG 0.49 GFF3599 DNA mismatch repair protein MutS low > 90
Acidovorax sp. GW101-3H11 0.50 Ac3H11_306 Epoxyqueuosine (oQ) reductase QueG 0.50 Ac3H11_3641 DNA mismatch repair protein MutS low > 79
Variovorax sp. OAS795 0.48 ABID97_RS20285 tRNA epoxyqueuosine(34) reductase QueG 0.47 ABID97_RS20815 DNA mismatch repair protein MutS low > 91
Pseudomonas sp. S08-1 0.48 OH686_09500 epoxyqueuosine reductase 0.46 OH686_18195 DNA mismatch repair protein MutS low > 80
Castellaniella sp019104865 MT123 0.48 ABCV34_RS13905 tRNA epoxyqueuosine(34) reductase QueG 0.49 ABCV34_RS00270 DNA mismatch repair protein MutS low > 48
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_0566 4Fe-4S cluster binding protein 0.47 Psyr_1376 DNA mismatch repair protein MutS low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_0566 4Fe-4S cluster binding protein 0.47 Psyr_1376 DNA mismatch repair protein MutS low > 86
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS02540 tRNA epoxyqueuosine(34) reductase QueG 0.47 PFLU_RS05765 DNA mismatch repair protein MutS low > 109
Pseudomonas fluorescens SBW25 0.47 PFLU_RS02540 tRNA epoxyqueuosine(34) reductase QueG 0.47 PFLU_RS05765 DNA mismatch repair protein MutS low > 109
Pseudomonas simiae WCS417 0.47 PS417_02460 epoxyqueuosine reductase 0.47 PS417_05680 DNA mismatch repair protein MutS low > 88
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS00835 tRNA epoxyqueuosine(34) reductase QueG 0.46 ABZR86_RS00630 DNA mismatch repair protein MutS low > 74
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_13115 epoxyqueuosine reductase 0.46 AO353_16625 DNA mismatch repair protein MutS low > 101
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_1418 Epoxyqueuosine (oQ) reductase QueG 0.46 Pf1N1B4_3117 DNA mismatch repair protein MutS low > 87
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_160 Epoxyqueuosine (oQ) reductase QueG 0.46 PfGW456L13_4672 DNA mismatch repair protein MutS low > 87
Pseudomonas sp. RS175 0.47 PFR28_05115 Epoxyqueuosine reductase 0.47 PFR28_00429 DNA mismatch repair protein MutS 0.28 41
Rhodanobacter sp. FW510-T8 0.46 OKGIIK_03900 queG tRNA epoxyqueuosine(34) reductase QueG 0.47 OKGIIK_03705 mutS DNA mismatch repair protein MutS low > 52
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_08685 epoxyqueuosine reductase 0.47 AO356_05875 DNA mismatch repair protein MutS low > 104
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_3620 Epoxyqueuosine (oQ) reductase QueG 0.47 Pf6N2E2_3035 DNA mismatch repair protein MutS low > 103
Pseudomonas stutzeri RCH2 0.46 Psest_0677 iron-sulfur cluster binding protein, putative 0.47 Psest_2875 DNA mismatch repair protein MutS low > 67
Marinobacter adhaerens HP15 0.45 HP15_2505 iron-sulfur cluster binding protein 0.50 HP15_1047 DNA mismatch repair protein MutS low > 73
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS15130 tRNA epoxyqueuosine(34) reductase QueG 0.46 LRK54_RS14935 DNA mismatch repair protein MutS low > 59
Rhodanobacter denitrificans MT42 0.45 LRK55_RS14845 tRNA epoxyqueuosine(34) reductase QueG 0.47 LRK55_RS14650 DNA mismatch repair protein MutS low > 63
Variovorax sp. SCN45 0.45 GFF4805 Epoxyqueuosine reductase (EC 1.17.99.6) QueG 0.47 GFF6634 DNA mismatch repair protein MutS low > 127
Lysobacter sp. OAE881 0.44 ABIE51_RS08045 tRNA epoxyqueuosine(34) reductase QueG 0.48 ABIE51_RS07785 DNA mismatch repair protein MutS low > 62
Klebsiella michiganensis M5al 0.44 BWI76_RS02505 tRNA epoxyqueuosine(34) reductase QueG 0.48 BWI76_RS22600 DNA mismatch repair protein MutS low > 92
Escherichia coli BW25113 0.44 b4166 yjeS predicted Fe-S electron transport protein (NCBI) 0.47 b2733 mutS DNA mismatch repair protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_03876 Epoxyqueuosine reductase 0.47 OHPLBJKB_01000 DNA mismatch repair protein MutS low > 73
Escherichia coli BL21 0.44 ECD_04033 epoxyqueuosine reductase, cobalamine-stimulated; queosine biosynthesis 0.47 ECD_02583 methyl-directed mismatch repair protein low > 61
Pseudomonas putida KT2440 0.44 PP_4900 epoxyqueuosine reductase 0.47 PP_1626 DNA mismatch repair protein MutS low > 96
Escherichia coli ECOR27 0.44 NOLOHH_04550 queG tRNA epoxyqueuosine(34) reductase QueG 0.47 NOLOHH_12370 mutS DNA mismatch repair protein MutS low > 75
Escherichia coli ECRC62 0.44 BNILDI_06940 queG tRNA epoxyqueuosine(34) reductase QueG 0.47 BNILDI_10920 mutS DNA mismatch repair protein MutS low > 75
Escherichia coli ECRC100 0.43 OKFHMN_12285 queG tRNA epoxyqueuosine(34) reductase QueG 0.47 OKFHMN_20525 mutS DNA mismatch repair protein MutS low > 80
Escherichia coli ECRC98 0.43 JDDGAC_15925 queG tRNA epoxyqueuosine(34) reductase QueG 0.47 JDDGAC_24190 mutS DNA mismatch repair protein MutS low > 86
Escherichia coli ECRC102 0.43 NIAGMN_10135 queG tRNA epoxyqueuosine(34) reductase QueG 0.47 NIAGMN_18295 mutS DNA mismatch repair protein MutS — —
Escherichia coli Nissle 1917 0.43 ECOLIN_RS24200 tRNA epoxyqueuosine(34) reductase QueG 0.47 ECOLIN_RS15275 DNA mismatch repair protein MutS low > 55
Escherichia coli ECRC99 0.43 KEDOAH_15870 queG tRNA epoxyqueuosine(34) reductase QueG 0.47 KEDOAH_07610 mutS DNA mismatch repair protein MutS — —
Escherichia coli ECOR38 0.43 HEPCGN_10515 queG tRNA epoxyqueuosine(34) reductase QueG 0.47 HEPCGN_19705 mutS DNA mismatch repair protein MutS 0.67 15
Escherichia coli ECRC101 0.43 MCAODC_02800 queG tRNA epoxyqueuosine(34) reductase QueG 0.47 MCAODC_11050 mutS DNA mismatch repair protein MutS low > 87
Alteromonas macleodii MIT1002 0.43 MIT1002_03794 Epoxyqueuosine reductase 0.46 MIT1002_00953 DNA mismatch repair protein MutS low > 70
Escherichia fergusonii Becca 0.43 EFB2_04369 Epoxyqueuosine reductase 0.47 EFB2_01179 DNA mismatch repair protein MutS low > 86
Enterobacter asburiae PDN3 0.43 EX28DRAFT_3363 epoxyqueuosine reductase 0.47 EX28DRAFT_2829 DNA mismatch repair protein MutS low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF819 Epoxyqueuosine (oQ) reductase QueG 0.48 GFF4773 DNA mismatch repair protein MutS low > 78
Dechlorosoma suillum PS 0.43 Dsui_3502 iron-sulfur cluster binding protein, putative 0.58 Dsui_2244 DNA mismatch repair protein MutS low > 51
Enterobacter sp. TBS_079 0.43 MPMX20_00447 Epoxyqueuosine reductase 0.47 MPMX20_03619 DNA mismatch repair protein MutS low > 85
Serratia liquefaciens MT49 0.43 IAI46_01595 tRNA epoxyqueuosine(34) reductase QueG 0.47 IAI46_03800 DNA mismatch repair protein MutS low > 86
Dickeya dadantii 3937 0.43 DDA3937_RS18645 tRNA epoxyqueuosine(34) reductase QueG 0.48 DDA3937_RS05230 DNA mismatch repair protein MutS low > 74
Vibrio cholerae E7946 ATCC 55056 0.43 CSW01_01810 tRNA epoxyqueuosine(34) reductase QueG 0.48 CSW01_02840 DNA mismatch repair protein MutS low > 62
Dickeya dianthicola 67-19 0.42 HGI48_RS18575 tRNA epoxyqueuosine(34) reductase QueG 0.48 HGI48_RS05230 DNA mismatch repair protein MutS low > 71
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.2252.1 Epoxyqueuosine (oQ) reductase QueG 0.46 Xcc-8004.3760.1 DNA mismatch repair protein MutS low > 74
Dickeya dianthicola ME23 0.42 DZA65_RS19710 tRNA epoxyqueuosine(34) reductase QueG 0.48 DZA65_RS05570 DNA mismatch repair protein MutS low > 75
Pectobacterium carotovorum WPP14 0.42 HER17_RS02555 tRNA epoxyqueuosine(34) reductase QueG 0.48 HER17_RS16220 DNA mismatch repair protein MutS low > 75
Shewanella oneidensis MR-1 0.42 SO3861 iron-sulfur cluster-binding protein (NCBI ptt file) 0.46 SO3431 mutS DNA mismatch repair protein MutS (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.41 Shewana3_0745 putative iron-sulfur cluster binding protein (RefSeq) 0.47 Shewana3_1125 DNA mismatch repair protein MutS (RefSeq) low > 73
Pantoea sp. MT58 0.41 IAI47_02560 tRNA epoxyqueuosine(34) reductase QueG 0.46 IAI47_04240 DNA mismatch repair protein MutS low > 76
Shewanella loihica PV-4 0.41 Shew_2979 putative iron-sulfur cluster binding protein (RefSeq) 0.46 Shew_1214 DNA mismatch repair protein (RefSeq) low > 60
Rahnella sp. WP5 0.41 EX31_RS08850 tRNA epoxyqueuosine(34) reductase QueG 0.47 EX31_RS07820 DNA mismatch repair protein MutS low > 89
Shewanella amazonensis SB2B 0.39 Sama_2625 iron-sulfur cluster-binding protein (RefSeq) 0.46 Sama_1045 DNA mismatch repair protein MutS (RefSeq) low > 62
Acinetobacter radioresistens SK82 0.37 MPMX26_01783 Epoxyqueuosine reductase 0.43 MPMX26_01954 DNA mismatch repair protein MutS low > 36
Kangiella aquimarina DSM 16071 0.35 B158DRAFT_0486 iron-sulfur cluster binding protein, putative 0.45 B158DRAFT_1529 DNA mismatch repair protein MutS low > 40
Rhizobium sp. OAE497 0.29 ABIE40_RS01310 tRNA epoxyqueuosine(34) reductase QueG 0.30 ABIE40_RS01775 DNA mismatch repair protein MutS low > 107
Rhodospirillum rubrum S1H 0.28 Rru_A0279 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) 0.30 Rru_A3541 MutS 1 protein (NCBI) low > 58
Rhodopseudomonas palustris CGA009 0.28 TX73_000215 tRNA epoxyqueuosine(34) reductase QueG 0.32 TX73_002655 DNA mismatch repair protein MutS low > 86
Sinorhizobium meliloti 1021 0.27 SMc00406 4Fe-4S ferredoxin 0.30 SMc01125 DNA mismatch repair protein MutS low > 103
Brevundimonas sp. GW460-12-10-14-LB2 0.27 A4249_RS11375 tRNA epoxyqueuosine(34) reductase QueG 0.27 A4249_RS12110 DNA mismatch repair protein MutS low > 48
Dinoroseobacter shibae DFL-12 0.27 Dshi_3307 domain of unknown function DUF1730 (RefSeq) 0.32 Dshi_3466 DNA mismatch repair protein MutS (RefSeq) low > 64
Caulobacter crescentus NA1000 0.27 CCNA_03753 iron-sulfur cluster-binding protein 0.27 CCNA_00012 DNA mismatch repair protein MutS low > 66
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_03753 iron-sulfur cluster-binding protein 0.27 CCNA_00012 DNA mismatch repair protein MutS low > 67
Sphingomonas koreensis DSMZ 15582 0.26 Ga0059261_1058 epoxyqueuosine reductase 0.30 Ga0059261_3784 DNA mismatch repair protein MutS low > 68
Magnetospirillum magneticum AMB-1 0.25 AMB_RS03995 tRNA epoxyqueuosine(34) reductase QueG 0.32 AMB_RS01455 DNA mismatch repair protein MutS low > 64

Not shown: 0 genomes with orthologs for QEN71_RS02745 only; 20 genomes with orthologs for QEN71_RS06085 only