Conservation of cofitness between Psyr_1407 and Psyr_2139 in Pseudomonas syringae pv. syringae B728a

85 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_1407 Protein of unknown function DUF28 1.0 Psyr_2139 Kef-type potassium/proton antiporter, CPA2 family 0.44 6
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_1407 Protein of unknown function DUF28 1.00 Psyr_2139 Kef-type potassium/proton antiporter, CPA2 family low > 86
Pseudomonas fluorescens GW456-L13 0.91 PfGW456L13_1850 FIG000859: hypothetical protein YebC 0.80 PfGW456L13_3558 Glutathione-regulated potassium-efflux system protein KefB low > 87
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_18010 hypothetical protein 0.34 AO356_22345 potassium transporter KefC low > 104
Pseudomonas fluorescens FW300-N2E2 0.89 Pf6N2E2_5534 FIG000859: hypothetical protein YebC 0.35 Pf6N2E2_339 Glutathione-regulated potassium-efflux system protein KefC low > 103
Pseudomonas sp. RS175 0.89 PFR28_03415 Transcriptional regulatory protein PmpR 0.34 PFR28_02569 Glutathione-regulated potassium-efflux system protein KefC low > 88
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_03595 hypothetical protein 0.78 AO353_26725 potassium transporter KefB low > 101
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_640 FIG000859: hypothetical protein YebC 0.78 Pf1N1B4_4461 Glutathione-regulated potassium-efflux system protein KefB
Pseudomonas simiae WCS417 0.86 PS417_22460 hypothetical protein 0.75 PS417_11420 potassium transporter KefB
Pseudomonas fluorescens SBW25 0.86 PFLU_RS24100 YebC/PmpR family DNA-binding transcriptional regulator 0.75 PFLU_RS11995 potassium transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.86 PFLU_RS24100 YebC/PmpR family DNA-binding transcriptional regulator 0.75 PFLU_RS11995 potassium transporter low > 109
Pseudomonas putida KT2440 0.83 PP_1214 putative transcriptional regulatory protein 0.68 PP_5246 glutathione-regulated potassium/H+ antiporter low > 96
Pseudomonas sp. S08-1 0.75 OH686_19120 Probable transcriptional regulatory protein YebC 0.21 OH686_03030 Inner membrane protein, KefB/KefC family low > 80
Shewanella oneidensis MR-1 0.70 SO2432 conserved hypothetical protein TIGR01033 (NCBI ptt file) 0.38 SO1481 glutathione-regulated potassium-efflux system protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.70 Shewana3_1954 hypothetical protein (RefSeq) 0.38 Shewana3_2945 potassium efflux system protein (RefSeq) low > 73
Pantoea sp. MT58 0.69 IAI47_08435 YebC/PmpR family DNA-binding transcriptional regulator 0.38 IAI47_02030 glutathione-regulated potassium-efflux system protein KefB low > 76
Dickeya dianthicola 67-19 0.68 HGI48_RS10095 YebC/PmpR family DNA-binding transcriptional regulator 0.38 HGI48_RS19525 glutathione-regulated potassium-efflux system protein KefB low > 71
Dickeya dianthicola ME23 0.68 DZA65_RS10510 YebC/PmpR family DNA-binding transcriptional regulator 0.39 DZA65_RS20615 glutathione-regulated potassium-efflux system protein KefB low > 75
Pectobacterium carotovorum WPP14 0.68 HER17_RS11855 YebC/PmpR family DNA-binding transcriptional regulator 0.36 HER17_RS01955 glutathione-regulated potassium-efflux system protein KefB low > 75
Rahnella sp. WP5 0.68 EX31_RS11685 YebC/PmpR family DNA-binding transcriptional regulator 0.38 EX31_RS04495 glutathione-regulated potassium-efflux system protein KefB low > 89
Shewanella loihica PV-4 0.68 Shew_2078 hypothetical protein (RefSeq) 0.31 Shew_2548 potassium efflux system protein (RefSeq)
Dickeya dadantii 3937 0.68 DDA3937_RS10065 YebC/PmpR family DNA-binding transcriptional regulator 0.38 DDA3937_RS19405 glutathione-regulated potassium-efflux system protein KefB low > 74
Shewanella amazonensis SB2B 0.68 Sama_1842 hypothetical protein (RefSeq) 0.31 Sama_1392 putative TrkA family protein (RefSeq) low > 62
Serratia liquefaciens MT49 0.67 IAI46_14635 YebC/PmpR family DNA-binding transcriptional regulator 0.37 IAI46_23515 glutathione-regulated potassium-efflux system protein KefB low > 86
Enterobacter asburiae PDN3 0.67 EX28DRAFT_0693 DNA-binding regulatory protein, YebC/PmpR family 0.39 EX28DRAFT_4179 transporter, monovalent cation:proton antiporter-2 (CPA2) family low > 76
Enterobacter sp. TBS_079 0.67 MPMX20_02769 putative transcriptional regulatory protein YebC 0.39 MPMX20_04244 Glutathione-regulated potassium-efflux system protein KefC low > 85
Escherichia coli ECRC100 0.67 OKFHMN_26255 putative transcriptional regulatory protein YebC 0.38 OKFHMN_17275 kefB glutathione-regulated potassium-efflux system protein KefB low > 80
Escherichia coli ECRC101 0.67 MCAODC_19150 putative transcriptional regulatory protein YebC 0.38 MCAODC_07805 kefB glutathione-regulated potassium-efflux system protein KefB low > 87
Escherichia coli Nissle 1917 0.67 ECOLIN_RS10380 YebC/PmpR family DNA-binding transcriptional regulator 0.38 ECOLIN_RS19190 glutathione-regulated potassium-efflux system protein KefB low > 55
Escherichia coli ECRC99 0.67 KEDOAH_01850 putative transcriptional regulatory protein YebC 0.38 KEDOAH_10865 kefB glutathione-regulated potassium-efflux system protein KefB
Escherichia coli ECRC102 0.67 NIAGMN_01805 putative transcriptional regulatory protein YebC 0.38 NIAGMN_15045 kefB glutathione-regulated potassium-efflux system protein KefB
Klebsiella michiganensis M5al 0.67 BWI76_RS18160 YebC/PmpR family DNA-binding transcriptional regulator 0.37 BWI76_RS25930 glutathione-regulated potassium-efflux system protein KefB
Escherichia coli ECOR27 0.67 NOLOHH_16700 putative transcriptional regulatory protein YebC 0.38 NOLOHH_09075 kefB glutathione-regulated potassium-efflux system protein KefB low > 75
Escherichia coli ECOR38 0.67 HEPCGN_04665 putative transcriptional regulatory protein YebC 0.38 HEPCGN_08855 kefC glutathione-regulated potassium-efflux system protein KefC low > 87
Escherichia coli ECRC62 0.67 BNILDI_15490 putative transcriptional regulatory protein YebC 0.38 BNILDI_02445 kefB glutathione-regulated potassium-efflux system protein KefB low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_01864 putative transcriptional regulatory protein YebC 0.38 OHPLBJKB_00352 Glutathione-regulated potassium-efflux system protein KefC low > 73
Escherichia coli BL21 0.67 ECD_01835 UPF0082 family protein 0.38 ECD_03201 potassium:proton antiporter low > 61
Escherichia fergusonii Becca 0.67 EFB2_02078 putative transcriptional regulatory protein YebC 0.38 EFB2_00472 Glutathione-regulated potassium-efflux system protein KefC low > 86
Escherichia coli ECRC98 0.67 JDDGAC_00830 putative transcriptional regulatory protein YebC 0.38 JDDGAC_20905 kefB glutathione-regulated potassium-efflux system protein KefB low > 86
Escherichia coli BW25113 0.67 b1864 yebC hypothetical protein (NCBI) 0.38 b3350 kefB glutathione-regulated potassium-efflux system protein (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF1645 FIG000859: hypothetical protein YebC 0.39 GFF3721 Glutathione-regulated potassium-efflux system protein KefB low > 78
Erwinia tracheiphila SCR3 0.65 LU632_RS13425 YebC/PmpR family DNA-binding transcriptional regulator 0.39 LU632_RS22735 kefB glutathione-regulated potassium-efflux system protein KefB low > 74
Kangiella aquimarina DSM 16071 0.64 B158DRAFT_1123 DNA-binding regulatory protein, YebC/PmpR family 0.33 B158DRAFT_1301 Kef-type potassium/proton antiporter, CPA2 family (TC 2.A.37.1) low > 40
Marinobacter adhaerens HP15 0.62 HP15_2043 protein YebC 0.34 HP15_1690 glutathione-regulated potassium-efflux system protein KefC low > 73
Acinetobacter radioresistens SK82 0.60 MPMX26_01851 putative transcriptional regulatory protein YebC 0.27 MPMX26_00281 Glutathione-regulated potassium-efflux system protein KefC low > 36
Herbaspirillum seropedicae SmR1 0.57 HSERO_RS17750 transcriptional regulator 0.36 HSERO_RS21970 potassium transporter
Paraburkholderia graminis OAS925 0.56 ABIE53_001546 YebC/PmpR family DNA-binding regulatory protein 0.21 ABIE53_000724 CPA2 family monovalent cation:H+ antiporter-2 low > 113
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS06410 transcriptional regulator 0.21 BPHYT_RS02935 potassium transporter low > 109
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_04522 DNA-binding regulatory protein, YebC/PmpR family 0.22 H281DRAFT_01921 Kef-type potassium/proton antiporter, CPA2 family
Dechlorosoma suillum PS 0.55 Dsui_0489 DNA-binding regulatory protein, YebC/PmpR family 0.24 Dsui_3384 transporter, monovalent cation:proton antiporter-2 (CPA2) family low > 51
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS04735 hypothetical protein 0.33 RR42_RS19450 potassium transporter KefC low > 128
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS24395 YebC/PmpR family DNA-binding transcriptional regulator 0.21 QEN71_RS01785 cation:proton antiporter low > 153
Ralstonia solanacearum PSI07 0.53 RPSI07_RS13685 YebC/PmpR family DNA-binding transcriptional regulator 0.34 RPSI07_RS09610 glutathione-regulated potassium-efflux system protein KefC
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS15405 YebC/PmpR family DNA-binding transcriptional regulator 0.34 ABZR87_RS03315 glutathione-regulated potassium-efflux system protein KefC low > 80
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS03540 YebC/PmpR family DNA-binding transcriptional regulator 0.34 RALBFv3_RS07650 glutathione-regulated potassium-efflux system protein KefC
Ralstonia solanacearum GMI1000 0.53 RS_RS10990 YebC/PmpR family DNA-binding transcriptional regulator 0.33 RS_RS15550 glutathione-regulated potassium-efflux system protein KefC low > 80
Ralstonia solanacearum UW163 0.53 UW163_RS10130 YebC/PmpR family DNA-binding transcriptional regulator 0.34 UW163_RS05975 glutathione-regulated potassium-efflux system protein KefC
Phaeobacter inhibens DSM 17395 0.51 PGA1_c21770 DNA-binding regulatory protein, YebC/PmpR family 0.31 PGA1_c07580 glutathione-regulated potassium-efflux system protein KefC
Hydrogenophaga sp. GW460-11-11-14-LB1 0.51 GFF4523 FIG000859: hypothetical protein YebC 0.20 GFF2441 Glutathione-regulated potassium-efflux system protein KefB low > 90
Variovorax sp. SCN45 0.51 GFF303 Probable transcriptional regulatory protein YebC 0.31 GFF2288 Glutathione-regulated potassium-efflux system protein KefC low > 127
Variovorax sp. OAS795 0.50 ABID97_RS16740 YebC/PmpR family DNA-binding transcriptional regulator 0.33 ABID97_RS24005 glutathione-regulated potassium-efflux system protein KefC low > 91
Acidovorax sp. GW101-3H11 0.50 Ac3H11_2422 FIG000859: hypothetical protein 0.37 Ac3H11_3902 Glutathione-regulated potassium-efflux system protein KefC
Lysobacter sp. OAE881 0.50 ABIE51_RS05035 YebC/PmpR family DNA-binding transcriptional regulator 0.47 ABIE51_RS02060 monovalent cation:proton antiporter-2 (CPA2) family protein low > 62
Desulfovibrio vulgaris Hildenborough JW710 0.50 DVU2259 conserved hypothetical protein TIGR01033 (TIGR) 0.19 DVU2302 glutathione-regulated potassium-efflux system protein KefB, putative (TIGR) low > 55
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.1434.1 FIG000859: hypothetical protein YebC 0.49 Xcc-8004.5067.1 Glutathione-regulated potassium-efflux system protein KefC low > 74
Bosea sp. OAE506 0.48 ABIE41_RS09460 YebC/PmpR family DNA-binding transcriptional regulator 0.31 ABIE41_RS12365 monovalent cation:proton antiporter-2 (CPA2) family protein 0.60 58
Sinorhizobium meliloti 1021 0.48 SMc03969 hypothetical protein 0.31 SMc00898 glutathione-regulated potassium-efflux system transmembrane protein low > 103
Dinoroseobacter shibae DFL-12 0.47 Dshi_2762 protein of unknown function DUF28 (RefSeq) 0.30 Dshi_0789 potassium efflux system protein (RefSeq) low > 64
Agrobacterium fabrum C58 0.47 Atu3727 hypothetical protein 0.31 Atu1693 glutathione-regulated potassium-efflux system protein low > 89
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS04920 YebC/PmpR family DNA-binding transcriptional regulator 0.53 LRK54_RS07160 monovalent cation:proton antiporter-2 (CPA2) family protein low > 59
Rhodanobacter denitrificans MT42 0.46 LRK55_RS04700 YebC/PmpR family DNA-binding transcriptional regulator 0.54 LRK55_RS06900 monovalent cation:proton antiporter-2 (CPA2) family protein low > 63
Magnetospirillum magneticum AMB-1 0.46 AMB_RS16265 YebC/PmpR family DNA-binding transcriptional regulator 0.26 AMB_RS17540 potassium transporter KefB
Rhizobium sp. OAE497 0.46 ABIE40_RS15665 YebC/PmpR family DNA-binding transcriptional regulator 0.30 ABIE40_RS03775 monovalent cation:proton antiporter-2 (CPA2) family protein low > 107
Rhodopseudomonas palustris CGA009 0.45 TX73_005640 YebC/PmpR family DNA-binding transcriptional regulator 0.24 TX73_019905 cation:proton antiporter low > 86
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_01830 tACO1 YebC/PmpR family DNA-binding transcriptional regulator 0.52 OKGIIK_16470 kch glutathione-regulated potassium-efflux system protein KefB low > 52
Azospirillum sp. SherDot2 0.44 MPMX19_00695 putative transcriptional regulatory protein 0.41 MPMX19_01061 Glutathione-regulated potassium-efflux system protein KefC low > 112
Azospirillum brasilense Sp245 0.44 AZOBR_RS09035 transcriptional regulator 0.27 AZOBR_RS19290 potassium transporter KefB low > 97
Sphingomonas koreensis DSMZ 15582 0.42 Ga0059261_0824 DNA-binding regulatory protein, YebC/PmpR family 0.26 Ga0059261_0743 Kef-type K+ transport systems, membrane components
Pontibacter actiniarum KMM 6156, DSM 19842 0.41 CA264_01650 YebC/PmpR family DNA-binding transcriptional regulator 0.23 CA264_05165 potassium transporter KefB low > 74
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS10850 YebC/PmpR family DNA-binding transcriptional regulator 0.55 ABZR86_RS13005 monovalent cation:proton antiporter-2 (CPA2) family protein
Caulobacter crescentus NA1000 Δfur 0.39 CCNA_03352 YebC/PmpR transcriptional regulator 0.31 CCNA_00204 glutathione-regulated potassium-efflux system protein kefB low > 67
Caulobacter crescentus NA1000 0.39 CCNA_03352 YebC/PmpR transcriptional regulator 0.31 CCNA_00204 glutathione-regulated potassium-efflux system protein kefB low > 66
Brevundimonas sp. GW460-12-10-14-LB2 0.37 A4249_RS15840 YebC/PmpR family DNA-binding transcriptional regulator 0.31 A4249_RS10440 monovalent cation:proton antiporter-2 (CPA2) family protein
Vibrio cholerae E7946 ATCC 55056 0.31 CSW01_14085 transcriptional regulator 0.38 CSW01_13195 glutathione-regulated potassium-efflux system protein KefB low > 62
Alteromonas macleodii MIT1002 0.31 MIT1002_00845 putative transcriptional regulatory protein YeeN 0.35 MIT1002_01563 K(+)/H(+) antiporter low > 70
Echinicola vietnamensis KMM 6221, DSM 17526 0.28 Echvi_1239 DNA-binding regulatory protein, YebC/PmpR family 0.18 Echvi_2814 Kef-type K+ transport systems, membrane components low > 79

Not shown: 16 genomes with orthologs for Psyr_1407 only; 0 genomes with orthologs for Psyr_2139 only