| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_4130 | | NADH:ubiquinone oxidoreductase, membrane subunit M | 1.0 | PP_1629 | | Protein RecA | 0.36 | 15 |
| Pseudomonas fluorescens FW300-N2C3 | 0.87 | AO356_22015 | | NADH:ubiquinone oxidoreductase subunit M | 0.88 | AO356_05670 | | recombinase RecA | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.87 | Pf6N2E2_266 | | NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) | 0.88 | Pf6N2E2_2993 | | RecA protein | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.86 | PfGW456L13_2622 | | NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) | 0.89 | PfGW456L13_4668 | | RecA protein | — | — |
| Pseudomonas sp. RS175 | 0.86 | PFR28_02638 | | NADH-quinone oxidoreductase subunit M | 0.88 | PFR28_00472 | | Protein RecA | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.86 | PFLU_RS18670 | | NADH-quinone oxidoreductase subunit M | 0.88 | PFLU_RS05885 | | recombinase RecA | 0.36 | 23 |
| Pseudomonas fluorescens SBW25 | 0.86 | PFLU_RS18670 | | NADH-quinone oxidoreductase subunit M | 0.88 | PFLU_RS05885 | | recombinase RecA | low | > 109 |
| Pseudomonas simiae WCS417 | 0.86 | PS417_16630 | | NADH:ubiquinone oxidoreductase subunit M | 0.88 | PS417_05815 | | recombinase RecA | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.85 | AO353_27795 | | NADH:ubiquinone oxidoreductase subunit M | 0.88 | AO353_16805 | | recombinase RecA | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.84 | Pf1N1B4_4029 | | NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) | 0.88 | Pf1N1B4_3143 | | RecA protein | low | > 87 |
| Pseudomonas syringae pv. syringae B728a | 0.83 | Psyr_3208 | | NADH dehydrogenase subunit M | 0.88 | Psyr_1378 | | RecA protein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.83 | Psyr_3208 | | NADH dehydrogenase subunit M | 0.88 | Psyr_1378 | | RecA protein | — | — |
| Pseudomonas sp. S08-1 | 0.81 | OH686_00100 | | NADH-ubiquinone oxidoreductase chain M | 0.89 | OH686_18205 | | protein RecA | low | > 80 |
| Serratia liquefaciens MT49 | 0.73 | IAI46_17655 | | NADH-quinone oxidoreductase subunit M | 0.71 | IAI46_03840 | | recombinase RecA | low | > 86 |
| Rahnella sp. WP5 | 0.73 | EX31_RS19380 | | NADH-quinone oxidoreductase subunit M | 0.73 | EX31_RS07800 | | recombinase RecA | low | > 89 |
| Escherichia coli ECRC102 | 0.73 | NIAGMN_20665 | nuoM | NADH-quinone oxidoreductase subunit M | 0.71 | NIAGMN_18475 | recA | recombinase RecA | — | — |
| Escherichia coli ECRC98 | 0.73 | JDDGAC_26860 | nuoM | NADH-quinone oxidoreductase subunit M | 0.71 | JDDGAC_24370 | recA | recombinase RecA | — | — |
| Escherichia coli ECRC101 | 0.73 | OKFHMN_22895 | nuoM | NADH-quinone oxidoreductase subunit M | 0.71 | OKFHMN_20705 | recA | recombinase RecA | — | — |
| Escherichia coli ECRC99 | 0.73 | KEDOAH_05300 | nuoM | NADH-quinone oxidoreductase subunit M | 0.71 | KEDOAH_07430 | recA | recombinase RecA | — | — |
| Escherichia coli BW25113 | 0.73 | b2277 | nuoM | NADH dehydrogenase subunit M (NCBI) | 0.71 | b2699 | recA | recombinase A (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.73 | HEPCGN_22100 | nuoM | NADH-quinone oxidoreductase subunit M | 0.71 | HEPCGN_19900 | recA | recombinase RecA | low | > 85 |
| Escherichia coli ECOR27 | 0.73 | NOLOHH_14515 | nuoM | NADH-quinone oxidoreductase subunit M | 0.71 | NOLOHH_12545 | recA | recombinase RecA | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.73 | OHPLBJKB_01429 | | NADH-quinone oxidoreductase subunit M | 0.71 | OHPLBJKB_01035 | | Protein RecA | low | > 73 |
| Escherichia coli ECRC101 | 0.73 | MCAODC_13935 | nuoM | NADH-quinone oxidoreductase subunit M | 0.71 | MCAODC_11230 | recA | recombinase RecA | — | — |
| Escherichia coli ECRC62 | 0.73 | BNILDI_13435 | nuoM | NADH-quinone oxidoreductase subunit M | 0.71 | BNILDI_11105 | recA | recombinase RecA | — | — |
| Escherichia coli BL21 | 0.73 | ECD_02202 | | NADH:ubiquinone oxidoreductase, membrane subunit M | 0.71 | ECD_02549 | | DNA recombination and repair protein; ssDNA-dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP-dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor | low | > 60 |
| Escherichia fergusonii Becca | 0.73 | EFB2_01582 | | NADH-quinone oxidoreductase subunit M | 0.71 | EFB2_01225 | | Protein RecA | low | > 86 |
| Escherichia coli Nissle 1917 | 0.73 | ECOLIN_RS13230 | | NADH-quinone oxidoreductase subunit M | 0.71 | ECOLIN_RS15060 | | recombinase RecA | — | — |
| Pantoea sp. MT58 | 0.73 | IAI47_06415 | | NADH-quinone oxidoreductase subunit M | 0.70 | IAI47_04300 | | recombinase RecA | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.73 | LU632_RS08020 | nuoM | NADH-quinone oxidoreductase subunit M | 0.72 | LU632_RS15735 | recA | recombinase RecA | low | > 74 |
| Klebsiella michiganensis M5al | 0.72 | BWI76_RS20135 | | NADH-quinone oxidoreductase subunit M | 0.72 | BWI76_RS22180 | | recombinase RecA | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.72 | GFF1880 | | NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) | 0.72 | GFF4693 | | RecA protein | — | — |
| Enterobacter asburiae PDN3 | 0.72 | EX28DRAFT_0333 | | proton-translocating NADH-quinone oxidoreductase, chain M | 0.71 | EX28DRAFT_2785 | | protein RecA | — | — |
| Enterobacter sp. TBS_079 | 0.72 | MPMX20_03207 | | NADH-quinone oxidoreductase subunit M | 0.71 | MPMX20_03580 | | Protein RecA | low | > 85 |
| Pectobacterium carotovorum WPP14 | 0.72 | HER17_RS07180 | | NADH-quinone oxidoreductase subunit M | 0.73 | HER17_RS05045 | | recombinase RecA | low | > 75 |
| Dickeya dianthicola ME23 | 0.72 | DZA65_RS14930 | | NADH-quinone oxidoreductase subunit M | 0.72 | DZA65_RS17450 | | recombinase RecA | — | — |
| Dickeya dianthicola 67-19 | 0.72 | HGI48_RS14255 | | NADH-quinone oxidoreductase subunit M | 0.72 | HGI48_RS16355 | | recombinase RecA | low | > 71 |
| Dickeya dadantii 3937 | 0.71 | DDA3937_RS14280 | | NADH-quinone oxidoreductase subunit M | 0.72 | DDA3937_RS16245 | | recombinase RecA | — | — |
| Shewanella oneidensis MR-1 | 0.68 | SO1010 | nuoM | NADH dehydrogenase I, M subunit (NCBI ptt file) | 0.73 | SO3430 | recA | recA protein (NCBI ptt file) | 0.35 | 64 |
| Acinetobacter radioresistens SK82 | 0.58 | MPMX26_02544 | | NADH-quinone oxidoreductase subunit M | 0.74 | MPMX26_01308 | | Protein RecA | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.49 | CA264_04215 | | NADH-quinone oxidoreductase subunit M | 0.61 | CA264_19695 | | DNA recombination/repair protein RecA | — | — |
| Azospirillum sp. SherDot2 | 0.35 | MPMX19_01734 | | NADH-quinone oxidoreductase subunit M | 0.67 | MPMX19_00869 | | Protein RecA | — | — |
| Azospirillum brasilense Sp245 | 0.35 | AZOBR_RS07225 | | NADH:ubiquinone oxidoreductase subunit M | 0.68 | AZOBR_RS11095 | | recombinase RecA | — | — |
| Sinorhizobium meliloti 1021 | 0.34 | SMc01926 | | NADH dehydrogenase subunit M | 0.67 | SMc00760 | | recombinase A | — | — |
| Rhodopseudomonas palustris CGA009 | 0.34 | TX73_022035 | | NADH-quinone oxidoreductase subunit M | 0.68 | TX73_019940 | | recombinase RecA | — | — |
| Rhodospirillum rubrum S1H | 0.33 | Rru_A1567 | | Proton-translocating NADH-quinone oxidoreductase, chain M (NCBI) | 0.67 | Rru_A2819 | | RecA DNA recombination protein (NCBI) | — | — |
| Agrobacterium fabrum C58 | 0.33 | Atu1282 | | NADH dehydrogenase I chain M | 0.66 | Atu1874 | | RecA protein | — | — |
| Caulobacter crescentus NA1000 | 0.33 | CCNA_02016 | | NADH-quinone oxidoreductase chain M | 0.63 | CCNA_01141 | | RecA protein | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.33 | CCNA_02016 | | NADH-quinone oxidoreductase chain M | 0.63 | CCNA_01141 | | RecA protein | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.33 | A4249_RS06345 | | NADH-quinone oxidoreductase subunit M | 0.65 | A4249_RS12615 | | recombinase RecA | — | — |
| Rhizobium sp. OAE497 | 0.32 | ABIE40_RS07245 | | NADH-quinone oxidoreductase subunit M | 0.67 | ABIE40_RS10320 | | recombinase RecA | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.32 | QEN71_RS24090 | | NADH-quinone oxidoreductase subunit M | 0.68 | QEN71_RS02335 | | recombinase RecA | — | — |
| Magnetospirillum magneticum AMB-1 | 0.32 | AMB_RS13950 | | NADH-quinone oxidoreductase subunit M | 0.66 | AMB_RS03205 | | DNA recombination/repair protein RecA | — | — |
| Ralstonia solanacearum PSI07 | 0.32 | RPSI07_RS14395 | | NADH-quinone oxidoreductase subunit M | 0.66 | RPSI07_RS21260 | | recombinase RecA | — | — |
| Ralstonia solanacearum UW163 | 0.32 | UW163_RS10810 | | NADH-quinone oxidoreductase subunit M | 0.65 | UW163_RS01625 | | recombinase RecA | — | — |
| Ralstonia solanacearum GMI1000 | 0.32 | RS_RS10285 | | NADH-quinone oxidoreductase subunit M | 0.65 | RS_RS02760 | | DNA recombination/repair protein RecA | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.32 | RALBFv3_RS02915 | | NADH-quinone oxidoreductase subunit M | 0.65 | RALBFv3_RS12010 | | recombinase RecA | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.32 | H281DRAFT_04579 | | NADH dehydrogenase subunit M | 0.69 | H281DRAFT_04208 | | RecA protein | — | — |
| Paraburkholderia graminis OAS925 | 0.32 | ABIE53_001602 | | NADH-quinone oxidoreductase subunit M | 0.69 | ABIE53_003448 | | recombination protein RecA | — | — |
| Phaeobacter inhibens DSM 17395 | 0.32 | PGA1_c10540 | | NADH-quinone oxidoreductase subunit M | 0.67 | PGA1_c15260 | | protein recA (recombinase A) | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.31 | RR42_RS05570 | | NADH:ubiquinone oxidoreductase subunit M | 0.67 | RR42_RS03080 | | recombinase RecA | — | — |
| Burkholderia phytofirmans PsJN | 0.31 | BPHYT_RS06685 | | NADH:ubiquinone oxidoreductase subunit M | 0.68 | BPHYT_RS16360 | | recombinase RecA | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.31 | GFF3693 | | NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) | 0.64 | GFF2500 | | RecA protein | — | — |
| Ralstonia sp. UNC404CL21Col | 0.31 | ABZR87_RS14820 | | NADH-quinone oxidoreductase subunit M | 0.65 | ABZR87_RS07965 | | recombinase RecA | — | — |
| Bosea sp. OAE506 | 0.31 | ABIE41_RS17880 | | NADH-quinone oxidoreductase subunit M | 0.64 | ABIE41_RS13335 | | recombinase RecA | — | — |
| Dinoroseobacter shibae DFL-12 | 0.31 | Dshi_1328 | | proton-translocating NADH-quinone oxidoreductase, chain M (RefSeq) | 0.63 | Dshi_1643 | | recA protein (RefSeq) | — | — |
| Acidovorax sp. GW101-3H11 | 0.30 | Ac3H11_1440 | | NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) | 0.66 | Ac3H11_1255 | | RecA protein | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.30 | Ga0059261_0697 | | proton-translocating NADH-quinone oxidoreductase, chain M | 0.69 | Ga0059261_0204 | | protein RecA | — | — |
| Castellaniella sp019104865 MT123 | 0.30 | ABCV34_RS08690 | | NADH-quinone oxidoreductase subunit M | 0.70 | ABCV34_RS04460 | | recombinase RecA | — | — |
| Dechlorosoma suillum PS | 0.30 | Dsui_3038 | | proton-translocating NADH-quinone oxidoreductase, chain M | 0.69 | Dsui_0707 | | protein RecA | — | — |
| Variovorax sp. OAS795 | 0.30 | ABID97_RS20435 | | NADH-quinone oxidoreductase subunit M | 0.65 | ABID97_RS02275 | | recombinase RecA | — | — |
| Variovorax sp. SCN45 | 0.30 | GFF4762 | | NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) | 0.65 | GFF5390 | | RecA protein | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.30 | ABZR86_RS06055 | | NADH-quinone oxidoreductase subunit M | 0.74 | ABZR86_RS00660 | | recombinase RecA | — | — |
| Lysobacter sp. OAE881 | 0.29 | ABIE51_RS08370 | | NADH-quinone oxidoreductase subunit M | 0.71 | ABIE51_RS07800 | | recombinase RecA | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.29 | Xcc-8004.1995.1 | | NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) | 0.69 | Xcc-8004.3111.1 | | RecA protein | — | — |
| Kangiella aquimarina DSM 16071 | 0.29 | B158DRAFT_0115 | | NADH dehydrogenase subunit M (EC 1.6.5.3) | 0.73 | B158DRAFT_1531 | | protein RecA | low | > 40 |
| Rhodanobacter sp. FW510-T8 | 0.29 | OKGIIK_05825 | nuoM | NADH-quinone oxidoreductase subunit M | 0.75 | OKGIIK_03740 | recA | recombinase RecA | — | — |
| Synechococcus elongatus PCC 7942 | 0.29 | Synpcc7942_1976 | ndhD | NAD(P)H-quinone oxidoreductase subunit D | 0.59 | Synpcc7942_0348 | recA | recombinase A | — | — |
| Herbaspirillum seropedicae SmR1 | 0.29 | HSERO_RS08880 | | NADH:ubiquinone oxidoreductase subunit M | 0.64 | HSERO_RS03270 | | protein RecA | — | — |
| Rhodanobacter denitrificans MT42 | 0.29 | LRK55_RS00845 | | NADH-quinone oxidoreductase subunit M | 0.75 | LRK55_RS14695 | | recombinase RecA | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.29 | LRK54_RS01070 | | NADH-quinone oxidoreductase subunit M | 0.75 | LRK54_RS14980 | | recombinase RecA | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.27 | CA265_RS23595 | | NADH-quinone oxidoreductase subunit M | 0.58 | CA265_RS00600 | | recombinase RecA | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.27 | ABZR88_RS15725 | | NuoM family protein | 0.58 | ABZR88_RS16740 | | recombinase RecA | — | — |
| Phocaeicola vulgatus CL09T03C04 | 0.22 | HMPREF1058_RS13295 | | NADH-quinone oxidoreductase subunit M | 0.57 | HMPREF1058_RS15965 | | recombinase RecA | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.22 | ABI39_RS08500 | | NADH-quinone oxidoreductase subunit M | 0.57 | ABI39_RS11930 | | recombinase RecA | low | > 72 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.22 | BT4059 | | NADH dehydrogenase I, chain M (NCBI ptt file) | 0.56 | BT4610 | | RecA (NCBI ptt file) | low | > 81 |
| Bacteroides ovatus ATCC 8483 | 0.22 | BACOVA_04854 | | proton-translocating NADH-quinone oxidoreductase, chain M | 0.57 | BACOVA_05402 | | RecA protein | low | > 94 |
| Bacteroides stercoris CC31F | 0.22 | HMPREF1181_RS09040 | | NADH-quinone oxidoreductase subunit M | 0.57 | HMPREF1181_RS11910 | | recombinase RecA | 0.29 | 56 |
Not shown: 1 genomes with orthologs for PP_4130 only; 13 genomes with orthologs for PP_1629 only