| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens SBW25 | 1.0 | PFLU_RS04350 | | metalloprotease PmbA | 1.0 | PFLU_RS21855 | | flagellar basal-body rod protein FlgG | 0.64 | 15 |
| Pseudomonas fluorescens SBW25-INTG | 1.00 | PFLU_RS04350 | | metalloprotease PmbA | 1.00 | PFLU_RS21855 | | flagellar basal-body rod protein FlgG | low | > 109 |
| Pseudomonas simiae WCS417 | 0.98 | PS417_04295 | | peptidase PmbA | 1.00 | PS417_19885 | | flagellar basal body rod protein FlgG | 0.49 | 20 |
| Pseudomonas fluorescens FW300-N2C3 | 0.96 | AO356_07085 | | peptidase PmbA | 0.94 | AO356_03925 | | flagellar basal-body rod protein FlgG | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.95 | Pf6N2E2_3278 | | TldE protein, part of TldE/TldD proteolytic complex | 0.94 | Pf6N2E2_2627 | | Flagellar basal-body rod protein FlgG | low | > 103 |
| Pseudomonas sp. RS175 | 0.95 | PFR28_00163 | | Metalloprotease PmbA | 0.93 | PFR28_00805 | | Flagellar basal-body rod protein FlgG | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.93 | AO353_05205 | | peptidase PmbA | 0.91 | AO353_18600 | | flagellar basal-body rod protein FlgG | 0.28 | 91 |
| Pseudomonas fluorescens GW456-L13 | 0.93 | PfGW456L13_5024 | | TldE protein, part of TldE/TldD proteolytic complex | 0.94 | PfGW456L13_4386 | | Flagellar basal-body rod protein FlgG | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.93 | Pf1N1B4_1090 | | TldE protein, part of TldE/TldD proteolytic complex | 0.94 | Pf1N1B4_3569 | | Flagellar basal-body rod protein FlgG | — | — |
| Pseudomonas putida KT2440 | 0.90 | PP_0942 | | regulatory protease | 0.90 | PP_4385 | | flagellar basal-body rod protein FlgG | low | > 96 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.89 | Psyr_4154 | | microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 | 0.85 | Psyr_3475 | | Flagellar basal body rod protein:Protein of unknown function DUF1078 | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.89 | Psyr_4154 | | microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 | 0.85 | Psyr_3475 | | Flagellar basal body rod protein:Protein of unknown function DUF1078 | low | > 86 |
| Pseudomonas sp. S08-1 | 0.81 | OH686_08570 | | TldE protein, part of TldE/TldD proteolytic complex | 0.86 | OH686_02950 | | flagellar basal-body rod protein FlgG | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.77 | Psest_3318 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.86 | Psest_2963 | | flagellar basal-body rod protein FlgG, Gram-negative bacteria | low | > 67 |
| Shewanella sp. ANA-3 | 0.51 | Shewana3_3631 | | microcin-processing peptidase 1 (RefSeq) | 0.55 | Shewana3_1326 | flgG | flagellar basal body rod protein FlgG (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.50 | Sama_0482 | | PmbA protein (RefSeq) | 0.55 | Sama_2313 | flgG | flagellar basal body rod protein FlgG (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.50 | SO4078 | pmbA | pmba protein (NCBI ptt file) | 0.55 | SO3244 | flgG | flagellar basal-body rod protein FlgG (NCBI ptt file) | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.50 | HER17_RS20090 | | metalloprotease PmbA | 0.60 | HER17_RS08190 | | flagellar basal-body rod protein FlgG | low | > 75 |
| Shewanella loihica PV-4 | 0.50 | Shew_0416 | | peptidase U62, modulator of DNA gyrase (RefSeq) | 0.56 | Shew_1350 | flgG | flagellar basal body rod protein FlgG (RefSeq) | low | > 60 |
| Lysobacter sp. OAE881 | 0.50 | ABIE51_RS06805 | | metalloprotease PmbA | 0.58 | ABIE51_RS16695 | | flagellar basal-body rod protein FlgG | low | > 62 |
| Rahnella sp. WP5 | 0.49 | EX31_RS12320 | | metalloprotease PmbA | 0.60 | EX31_RS11290 | | flagellar basal-body rod protein FlgG | low | > 89 |
| Rhodanobacter sp. FW510-T8 | 0.49 | OKGIIK_10260 | pmbA | metalloprotease PmbA | 0.66 | OKGIIK_02675 | flgG | flagellar basal-body rod protein FlgG | low | > 52 |
| Escherichia fergusonii Becca | 0.48 | EFB2_04298 | | Metalloprotease PmbA | 0.59 | EFB2_02896 | | Flagellar basal-body rod protein FlgG | 0.27 | 82 |
| Enterobacter sp. TBS_079 | 0.48 | MPMX20_00517 | | Metalloprotease PmbA | 0.58 | MPMX20_01757 | | Flagellar basal-body rod protein FlgG | low | > 85 |
| Enterobacter asburiae PDN3 | 0.48 | EX28DRAFT_3422 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.58 | EX28DRAFT_1854 | | flagellar basal-body rod protein FlgG, Gram-negative bacteria | low | > 76 |
| Escherichia coli ECRC100 | 0.48 | OKFHMN_11925 | pmbA | metalloprotease PmbA | 0.59 | OKFHMN_03650 | flgG | flagellar basal-body rod protein FlgG | low | > 80 |
| Escherichia coli BL21 | 0.48 | ECD_04103 | | putative antibiotic peptide MccB17 maturation peptidase | 0.59 | ECD_01074 | | flagellar component of cell-distal portion of basal-body rod | low | > 61 |
| Escherichia coli ECRC102 | 0.48 | NIAGMN_09775 | pmbA | metalloprotease PmbA | 0.59 | NIAGMN_24180 | flgG | flagellar basal-body rod protein FlgG | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.48 | Xcc-8004.1885.1 | | TldE protein, part of TldE/TldD proteolytic complex | 0.63 | Xcc-8004.2784.1 | | Flagellar basal-body rod protein FlgG | low | > 74 |
| Escherichia coli ECOR27 | 0.48 | NOLOHH_04185 | pmbA | metalloprotease PmbA | 0.58 | NOLOHH_21180 | flgG | flagellar basal-body rod protein FlgG | low | > 75 |
| Escherichia coli Nissle 1917 | 0.48 | ECOLIN_RS24570 | | metalloprotease PmbA | 0.59 | ECOLIN_RS06240 | | flagellar basal-body rod protein FlgG | — | — |
| Dechlorosoma suillum PS | 0.48 | Dsui_1234 | | putative Zn-dependent protease-like protein | 0.62 | Dsui_1737 | | flagellar basal-body rod protein FlgG | low | > 51 |
| Escherichia coli ECRC99 | 0.48 | KEDOAH_16230 | pmbA | metalloprotease PmbA | 0.59 | KEDOAH_24105 | flgG | flagellar basal-body rod protein FlgG | — | — |
| Escherichia coli ECRC101 | 0.48 | MCAODC_02430 | pmbA | metalloprotease PmbA | 0.59 | MCAODC_23010 | flgG | flagellar basal-body rod protein FlgG | low | > 87 |
| Escherichia coli ECRC98 | 0.48 | JDDGAC_15565 | pmbA | metalloprotease PmbA | 0.59 | JDDGAC_07310 | flgG | flagellar basal-body rod protein FlgG | low | > 86 |
| Escherichia coli BW25113 | 0.48 | b4235 | pmbA | predicted peptidase required for the maturation and secretion of the antibiotic peptide MccB17 (NCBI) | 0.59 | b1078 | flgG | flagellar component of cell-distal portion of basal-body rod (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.48 | HEPCGN_10125 | pmbA | metalloprotease PmbA | 0.59 | HEPCGN_23840 | flgG | flagellar basal-body rod protein FlgG | low | > 87 |
| Escherichia coli ECRC62 | 0.48 | BNILDI_07325 | pmbA | metalloprotease PmbA | 0.59 | BNILDI_19340 | flgG | flagellar basal-body rod protein FlgG | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.48 | OHPLBJKB_03800 | | Metalloprotease PmbA | 0.59 | OHPLBJKB_02587 | | Flagellar basal-body rod protein FlgG | low | > 73 |
| Rhodanobacter denitrificans MT42 | 0.48 | LRK55_RS03125 | | metalloprotease PmbA | 0.66 | LRK55_RS13170 | | flagellar basal-body rod protein FlgG | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.48 | LRK54_RS03375 | | metalloprotease PmbA | 0.66 | LRK54_RS13430 | | flagellar basal-body rod protein FlgG | low | > 59 |
| Vibrio cholerae E7946 ATCC 55056 | 0.48 | CSW01_12845 | | metalloprotease PmbA | 0.60 | CSW01_11200 | | flagellar basal-body rod protein FlgG | 0.82 | 35 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.48 | GFF904 | | TldE protein, part of TldE/TldD proteolytic complex | 0.59 | GFF3359 | | Flagellar basal-body rod protein FlgG | low | > 78 |
| Serratia liquefaciens MT49 | 0.48 | IAI46_22575 | | metalloprotease PmbA | 0.61 | IAI46_15935 | | flagellar basal-body rod protein FlgG | low | > 86 |
| Alteromonas macleodii MIT1002 | 0.48 | MIT1002_00230 | | peptidase PmbA | 0.53 | MIT1002_01046 | | Distal rod protein | low | > 70 |
| Dyella japonica UNC79MFTsu3.2 | 0.47 | ABZR86_RS21700 | | metalloprotease PmbA | 0.67 | ABZR86_RS20100 | | flagellar basal-body rod protein FlgG | low | > 74 |
| Erwinia tracheiphila SCR3 | 0.47 | LU632_RS02145 | pmbA | metalloprotease PmbA | 0.57 | LU632_RS10420 | flgG | flagellar basal-body rod protein FlgG | low | > 74 |
| Dickeya dianthicola 67-19 | 0.47 | HGI48_RS01415 | | metalloprotease PmbA | 0.60 | HGI48_RS13500 | | flagellar basal-body rod protein FlgG | low | > 71 |
| Dickeya dianthicola ME23 | 0.47 | DZA65_RS01480 | | metalloprotease PmbA | 0.60 | DZA65_RS13985 | | flagellar basal-body rod protein FlgG | low | > 75 |
| Dickeya dadantii 3937 | 0.47 | DDA3937_RS01500 | | metalloprotease PmbA | 0.60 | DDA3937_RS13455 | | flagellar basal-body rod protein FlgG | 0.79 | 20 |
| Pantoea sp. MT58 | 0.46 | IAI47_02765 | | metalloprotease PmbA | 0.55 | IAI47_12140 | | flagellar basal-body rod protein FlgG | low | > 76 |
| Variovorax sp. SCN45 | 0.46 | GFF4697 | | TldE protein, part of TldE/TldD proteolytic complex | 0.58 | GFF5720 | | Flagellar basal-body rod protein FlgG | low | > 127 |
| Herbaspirillum seropedicae SmR1 | 0.45 | HSERO_RS09265 | | peptidase C69 | 0.61 | HSERO_RS10205 | | flagellar basal body rod protein FlgG | low | > 78 |
| Ralstonia solanacearum IBSBF1503 | 0.44 | RALBFv3_RS13965 | | metalloprotease PmbA | 0.59 | RALBFv3_RS21715 | | flagellar basal-body rod protein FlgG | low | > 76 |
| Ralstonia solanacearum UW163 | 0.44 | UW163_RS15845 | | metalloprotease PmbA | 0.59 | UW163_RS17470 | | flagellar basal-body rod protein FlgG | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.44 | H281DRAFT_04304 | | microcin-processing peptidase 1. Unknown type peptidase. MEROPS family U62 | 0.61 | H281DRAFT_05767 | | flagellar basal-body rod protein FlgG | low | > 103 |
| Ralstonia sp. UNC404CL21Col | 0.44 | ABZR87_RS09660 | | metalloprotease PmbA | 0.56 | ABZR87_RS22265 | | flagellar basal-body rod protein FlgG | low | > 80 |
| Paraburkholderia sabiae LMG 24235 | 0.44 | QEN71_RS04270 | | metalloprotease PmbA | 0.60 | QEN71_RS28895 | | flagellar basal-body rod protein FlgG | 0.73 | 120 |
| Paraburkholderia graminis OAS925 | 0.44 | ABIE53_003116 | | PmbA protein | 0.61 | ABIE53_000096 | | flagellar basal-body rod protein FlgG | 0.38 | 50 |
| Cupriavidus basilensis FW507-4G11 | 0.44 | RR42_RS14750 | | peptidase PMbA | 0.58 | RR42_RS35700 | | flagellar basal body rod protein FlgG | low | > 128 |
| Ralstonia solanacearum PSI07 | 0.43 | RPSI07_RS19505 | | metalloprotease PmbA | 0.58 | RPSI07_RS01415 | | flagellar basal-body rod protein FlgG | low | > 81 |
| Burkholderia phytofirmans PsJN | 0.43 | BPHYT_RS14705 | | peptidase C69 | 0.60 | BPHYT_RS18870 | | flagellar basal body rod protein FlgG | low | > 109 |
| Acidovorax sp. GW101-3H11 | 0.43 | Ac3H11_3262 | | TldE protein, part of TldE/TldD proteolytic complex | 0.55 | Ac3H11_1372 | | Flagellar basal-body rod protein FlgG | low | > 79 |
| Castellaniella sp019104865 MT123 | 0.42 | ABCV34_RS10610 | | metalloprotease PmbA | 0.55 | ABCV34_RS05745 | | flagellar basal-body rod protein FlgG | low | > 48 |
| Ralstonia solanacearum GMI1000 | 0.42 | RS_RS04700 | | metalloprotease PmbA | 0.59 | RS_RS18820 | | flagellar basal-body rod protein FlgG | low | > 80 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.40 | GFF3655 | | TldE protein, part of TldE/TldD proteolytic complex | 0.56 | GFF1410 | | Flagellar basal-body rod protein FlgG | low | > 90 |
| Azospirillum brasilense Sp245 | 0.29 | AZOBR_RS11930 | | modulator protein | 0.46 | AZOBR_RS11220 | | flagellar basal body rod protein FlgG | low | > 97 |
| Azospirillum sp. SherDot2 | 0.28 | MPMX19_01886 | | Metalloprotease PmbA | 0.46 | MPMX19_01484 | | Flagellar basal-body rod protein FlgG | low | > 112 |
| Dinoroseobacter shibae DFL-12 | 0.27 | Dshi_0064 | | peptidase U62 modulator of DNA gyrase (RefSeq) | 0.42 | Dshi_3252 | | flagellar basal-body rod protein FlgG (RefSeq) | low | > 64 |
| Rhodopseudomonas palustris CGA009 | 0.27 | TX73_005930 | | TldD/PmbA family protein | 0.48 | TX73_020220 | | flagellar basal-body rod protein FlgG | low | > 86 |
| Sphingomonas koreensis DSMZ 15582 | 0.26 | Ga0059261_0810 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.50 | Ga0059261_2094 | | flagellar basal-body rod protein FlgG, Gram-negative bacteria | low | > 68 |
| Phaeobacter inhibens DSM 17395 | 0.26 | PGA1_c33480 | | protein PmbA | 0.43 | PGA1_c35780 | | flagellar basal-body rod protein FlgG | — | — |
| Sinorhizobium meliloti 1021 | 0.25 | SMc00897 | | PMBA protein | 0.44 | SMc03030 | | flagellar basal body rod protein FlgG | low | > 103 |
| Magnetospirillum magneticum AMB-1 | 0.25 | AMB_RS22120 | | TldD/PmbA family protein | 0.46 | AMB_RS17680 | | flagellar basal-body rod protein FlgG | low | > 64 |
| Agrobacterium fabrum C58 | 0.25 | Atu0693 | | PmbA/TldD related protein | 0.44 | Atu0552 | | flagellar basal-body rod protein | low | > 89 |
| Rhizobium sp. OAE497 | 0.24 | ABIE40_RS03780 | | TldD/PmbA family protein | 0.47 | ABIE40_RS02985 | | flagellar basal-body rod protein FlgG | low | > 107 |
| Caulobacter crescentus NA1000 Δfur | 0.24 | CCNA_00311 | | Zn-dependent protease family protein | 0.45 | CCNA_02143 | | flagellar basal-body rod protein flgG | low | > 67 |
| Caulobacter crescentus NA1000 | 0.24 | CCNA_00311 | | Zn-dependent protease family protein | 0.45 | CCNA_02143 | | flagellar basal-body rod protein flgG | low | > 66 |
| Rhodospirillum rubrum S1H | 0.23 | Rru_A0575 | | Peptidase U62, modulator of DNA gyrase (NCBI) | 0.44 | Rru_A2843 | | hypothetical protein (NCBI) | low | > 58 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.23 | A4249_RS09195 | | TldD/PmbA family protein | 0.49 | A4249_RS09625 | | flagellar basal-body rod protein FlgG | low | > 48 |
Not shown: 7 genomes with orthologs for PFLU_RS04350 only; 4 genomes with orthologs for PFLU_RS21855 only