Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Rhodanobacter denitrificans MT42 | 1.0 | LRK55_RS07250 | | deoxyribodipyrimidine photo-lyase | 1.0 | LRK55_RS09950 | | biosynthetic-type acetolactate synthase large subunit | 0.56 | 20 |
Rhodanobacter denitrificans FW104-10B01 | 1.00 | LRK54_RS07510 | | DNA photolyase family protein | 1.00 | LRK54_RS10310 | | biosynthetic-type acetolactate synthase large subunit | low | > 59 |
Rhodanobacter sp. FW510-T8 | 0.82 | OKGIIK_13930 | | Deoxyribodipyrimidine photolyase | 0.85 | OKGIIK_13610 | ilvB | biosynthetic-type acetolactate synthase large subunit | low | > 52 |
Dyella japonica UNC79MFTsu3.2 | 0.69 | ABZR86_RS01855 | | deoxyribodipyrimidine photo-lyase | 0.81 | ABZR86_RS15935 | | biosynthetic-type acetolactate synthase large subunit | low | > 74 |
Lysobacter sp. OAE881 | 0.53 | ABIE51_RS09260 | | deoxyribodipyrimidine photo-lyase | 0.34 | ABIE51_RS17550 | | acetolactate synthase 2 catalytic subunit | low | > 62 |
Xanthomonas campestris pv. campestris strain 8004 | 0.53 | Xcc-8004.3484.1 | | Deoxyribodipyrimidine photolyase (EC 4.1.99.3) | 0.33 | Xcc-8004.1059.1 | | Acetolactate synthase large subunit (EC 2.2.1.6) | low | > 74 |
Alteromonas macleodii MIT1002 | 0.46 | MIT1002_02045 | | Deoxyribodipyrimidine photo-lyase | 0.33 | MIT1002_00503 | | Acetolactate synthase isozyme 3 large subunit | low | > 70 |
Caulobacter crescentus NA1000 | 0.45 | CCNA_01495 | | deoxyribodipyrimidine photolyase | 0.38 | CCNA_02185 | | acetolactate synthase large subunit | low | > 66 |
Caulobacter crescentus NA1000 Δfur | 0.45 | CCNA_01495 | | deoxyribodipyrimidine photolyase | 0.38 | CCNA_02185 | | acetolactate synthase large subunit | low | > 67 |
Azospirillum brasilense Sp245 | 0.44 | AZOBR_RS09290 | | deoxyribodipyrimidine photo-lyase | 0.37 | AZOBR_RS06560 | | acetolactate synthase | low | > 97 |
Azospirillum sp. SherDot2 | 0.43 | MPMX19_01584 | | Deoxyribodipyrimidine photo-lyase | 0.36 | MPMX19_01776 | | Acetolactate synthase isozyme 3 large subunit | — | — |
Rhodospirillum rubrum S1H | 0.43 | Rru_A2903 | | Deoxyribodipyrimidine photolyase (NCBI) | 0.38 | Rru_A0467 | | Acetolactate synthase, large subunit, biosynthetic type (NCBI) | low | > 58 |
Agrobacterium fabrum C58 | 0.41 | Atu1218 | | DNA photolyase | 0.37 | Atu2036 | | acetolactate synthase III, large subunit | low | > 89 |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.41 | A4249_RS05610 | | deoxyribodipyrimidine photo-lyase | 0.33 | A4249_RS10020 | | acetolactate synthase 2 catalytic subunit | low | > 48 |
Bosea sp. OAE506 | 0.41 | ABIE41_RS15630 | | deoxyribodipyrimidine photo-lyase | 0.37 | ABIE41_RS12890 | | acetolactate synthase 3 large subunit | — | — |
Rhizobium sp. OAE497 | 0.41 | ABIE40_RS08320 | | deoxyribodipyrimidine photo-lyase | 0.37 | ABIE40_RS11495 | | acetolactate synthase 3 large subunit | low | > 107 |
Rhodopseudomonas palustris CGA009 | 0.40 | TX73_016440 | | deoxyribodipyrimidine photo-lyase | 0.35 | TX73_010465 | | acetolactate synthase 3 large subunit | — | — |
Dinoroseobacter shibae DFL-12 | 0.35 | Dshi_2318 | | Deoxyribodipyrimidine photo-lyase (RefSeq) | 0.35 | Dshi_1779 | | acetolactate synthase, large subunit, biosynthetic type (RefSeq) | — | — |
Phaeobacter inhibens DSM 17395 | 0.35 | PGA1_c13910 | | deoxyribodipyrimidine photo-lyase PhrB | 0.35 | PGA1_c20210 | | acetolactate synthase isozyme 3 large subunit | low | > 62 |
Erwinia amylovora T8 | 0.30 | OLJFJH_17015 | | deoxyribodipyrimidine photo-lyase | 0.37 | OLJFJH_06215 | | acetolactate synthase 2 catalytic subunit | low | > 58 |
Herbaspirillum seropedicae SmR1 | 0.30 | HSERO_RS09280 | | deoxyribodipyrimidine photo-lyase | 0.34 | HSERO_RS08650 | | acetolactate synthase | 0.32 | 24 |
Pontibacter actiniarum KMM 6156, DSM 19842 | 0.30 | CA264_08145 | | deoxyribodipyrimidine photo-lyase | 0.30 | CA264_06930 | | acetolactate synthase, large subunit, biosynthetic type | low | > 74 |
Rahnella sp. WP5 | 0.30 | EX31_RS23365 | | deoxyribodipyrimidine photo-lyase | 0.37 | EX31_RS14990 | | acetolactate synthase 2 catalytic subunit | low | > 89 |
Serratia liquefaciens MT49 | 0.29 | IAI46_06200 | | deoxyribodipyrimidine photo-lyase | 0.36 | IAI46_24360 | | acetolactate synthase 2 catalytic subunit | low | > 86 |
Marinobacter adhaerens HP15 | 0.29 | HP15_715 | | deoxyribodipyrimidine photolyase | 0.35 | HP15_531 | | acetolactate synthase, large subunit, biosynthetic type | low | > 73 |
Shewanella amazonensis SB2B | 0.29 | Sama_0811 | | deoxyribodipyrimidine photo-lyase (RefSeq) | 0.34 | Sama_3281 | | acetolactate synthase 2 catalytic subunit (RefSeq) | low | > 62 |
Echinicola vietnamensis KMM 6221, DSM 17526 | 0.29 | Echvi_2083 | | Deoxyribodipyrimidine photolyase | 0.31 | Echvi_2056 | | acetolactate synthase, large subunit, biosynthetic type | low | > 79 |
Klebsiella michiganensis M5al | 0.29 | BWI76_RS08335 | | deoxyribodipyrimidine photo-lyase | 0.36 | BWI76_RS00960 | | acetolactate synthase 2 catalytic subunit | low | > 92 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.28 | OHPLBJKB_03009 | | Deoxyribodipyrimidine photo-lyase | 0.36 | OHPLBJKB_04285 | | Acetolactate synthase isozyme 2 large subunit | low | > 73 |
Escherichia coli BW25113 | 0.28 | b0708 | phr | deoxyribodipyrimidine photolyase, FAD-binding (NCBI) | 0.33 | b0077 | ilvI | acetolactate synthase III large subunit (NCBI) | low | > 76 |
Dechlorosoma suillum PS | 0.28 | Dsui_0591 | | deoxyribodipyrimidine photolyase | 0.34 | Dsui_3529 | | acetolactate synthase, large subunit, biosynthetic type | — | — |
Escherichia coli ECRC62 | 0.28 | BNILDI_21400 | phrB | deoxyribodipyrimidine photo-lyase | 0.36 | BNILDI_04735 | ilvG | acetolactate synthase 2 catalytic subunit | low | > 75 |
Escherichia coli ECRC100 | 0.28 | OKFHMN_07025 | phrB | deoxyribodipyrimidine photo-lyase | 0.35 | OKFHMN_14655 | ilvG | acetolactate synthase 2 catalytic subunit | low | > 80 |
Escherichia coli ECRC101 | 0.28 | MCAODC_26245 | phrB | deoxyribodipyrimidine photo-lyase | 0.35 | MCAODC_05160 | ilvG | acetolactate synthase 2 catalytic subunit | low | > 87 |
Pseudomonas sp. S08-1 | 0.28 | OH686_07850 | | Deoxyribodipyrimidine photolyase | 0.32 | OH686_08130 | | acetolactate synthase, large subunit, biosynthetic type | low | > 80 |
Escherichia coli ECRC99 | 0.28 | KEDOAH_20940 | phrB | deoxyribodipyrimidine photo-lyase | 0.35 | KEDOAH_13495 | ilvG | acetolactate synthase 2 catalytic subunit | — | — |
Escherichia coli ECRC98 | 0.28 | JDDGAC_10680 | phrB | deoxyribodipyrimidine photo-lyase | 0.35 | JDDGAC_18275 | ilvG | acetolactate synthase 2 catalytic subunit | low | > 86 |
Escherichia coli ECRC102 | 0.28 | NIAGMN_05080 | phrB | deoxyribodipyrimidine photo-lyase | 0.35 | NIAGMN_12410 | ilvG | acetolactate synthase 2 catalytic subunit | — | — |
Paraburkholderia sabiae LMG 24235 | 0.28 | QEN71_RS17830 | | deoxyribodipyrimidine photo-lyase | 0.60 | QEN71_RS38255 | | biosynthetic-type acetolactate synthase large subunit | low | > 153 |
Synechococcus elongatus PCC 7942 | 0.28 | Synpcc7942_0112 | phr | Deoxyribodipyrimidine photo-lyase type I | 0.37 | Synpcc7942_0139 | ilvB | acetolactate synthase 3 catalytic subunit | — | — |
Escherichia coli BL21 | 0.28 | ECD_00668 | | deoxyribodipyrimidine photolyase, FAD-binding | 0.36 | ECD_03646 | | acetolactate synthase II, valine insensitive, large subunit | low | > 61 |
Escherichia coli ECOR27 | 0.28 | NOLOHH_23405 | phrB | deoxyribodipyrimidine photo-lyase | 0.36 | NOLOHH_06790 | ilvG | acetolactate synthase 2 catalytic subunit | low | > 75 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.28 | GFF647 | | Deoxyribodipyrimidine photolyase (EC 4.1.99.3) | 0.34 | GFF4276 | | Acetolactate synthase large subunit (EC 2.2.1.6) | — | — |
Pectobacterium carotovorum WPP14 | 0.28 | HER17_RS14995 | | deoxyribodipyrimidine photo-lyase | 0.35 | HER17_RS01060 | | acetolactate synthase 2 catalytic subunit | low | > 75 |
Erwinia tracheiphila SCR3 | 0.28 | LU632_RS16155 | phrB | deoxyribodipyrimidine photo-lyase | 0.36 | LU632_RS24415 | ilvG | acetolactate synthase 2 catalytic subunit | low | > 74 |
Dickeya dadantii 3937 | 0.28 | DDA3937_RS06405 | | deoxyribodipyrimidine photo-lyase | 0.34 | DDA3937_RS20170 | | acetolactate synthase 2 catalytic subunit | low | > 74 |
Acidovorax sp. GW101-3H11 | 0.28 | Ac3H11_3983 | | Deoxyribodipyrimidine photolyase (EC 4.1.99.3) | 0.31 | Ac3H11_525 | | Acetolactate synthase large subunit (EC 2.2.1.6) | low | > 79 |
Cupriavidus basilensis FW507-4G11 | 0.28 | RR42_RS15885 | | deoxyribodipyrimidine photolyase | 0.35 | RR42_RS05435 | | acetolactate synthase 3 catalytic subunit | — | — |
Pseudomonas putida KT2440 | 0.28 | PP_0739 | | deoxyribodipyrimidine photolyase | 0.33 | PP_4680 | | acetohydroxybutanoate synthase / acetolactate synthase | low | > 96 |
Pantoea sp. MT58 | 0.27 | IAI47_13815 | | deoxyribodipyrimidine photo-lyase | 0.37 | IAI47_01020 | | acetolactate synthase 2 catalytic subunit | low | > 76 |
Pseudomonas fluorescens GW456-L13 | 0.27 | PfGW456L13_1589 | | Deoxyribodipyrimidine photolyase (EC 4.1.99.3) | 0.32 | PfGW456L13_1538 | | Acetolactate synthase large subunit (EC 2.2.1.6) | low | > 87 |
Pseudomonas fluorescens FW300-N1B4 | 0.27 | Pf1N1B4_2927 | | Deoxyribodipyrimidine photolyase (EC 4.1.99.3) | 0.32 | Pf1N1B4_2878 | | Acetolactate synthase large subunit (EC 2.2.1.6) | low | > 87 |
Pedobacter sp. GW460-11-11-14-LB5 | 0.27 | CA265_RS17545 | | deoxyribodipyrimidine photolyase | 0.29 | CA265_RS15805 | | acetolactate synthase, large subunit, biosynthetic type | low | > 88 |
Variovorax sp. OAS795 | 0.27 | ABID97_RS24680 | | deoxyribodipyrimidine photo-lyase | 0.32 | ABID97_RS12545 | | biosynthetic-type acetolactate synthase large subunit | low | > 91 |
Pseudomonas fluorescens SBW25-INTG | 0.27 | PFLU_RS03715 | | deoxyribodipyrimidine photo-lyase | 0.32 | PFLU_RS25650 | | acetolactate synthase 3 large subunit | — | — |
Pseudomonas sp. RS175 | 0.27 | PFR28_03648 | | Deoxyribodipyrimidine photo-lyase | 0.33 | PFR28_03699 | | Acetolactate synthase isozyme 3 large subunit | low | > 88 |
Pseudomonas fluorescens FW300-N2E3 | 0.27 | AO353_14820 | | deoxyribodipyrimidine photolyase | 0.32 | AO353_14495 | | acetolactate synthase 3 catalytic subunit | low | > 101 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.27 | Psyr_0961 | | deoxyribodipyrimidine photo-lyase type I | 0.33 | Psyr_0846 | | acetolactate synthase, large subunit | low | > 86 |
Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.27 | ABZR88_RS21110 | | deoxyribodipyrimidine photo-lyase | 0.31 | ABZR88_RS11580 | | biosynthetic-type acetolactate synthase large subunit | low | > 71 |
Pseudomonas fluorescens SBW25 | 0.27 | PFLU_RS03715 | | deoxyribodipyrimidine photo-lyase | 0.32 | PFLU_RS25650 | | acetolactate synthase 3 large subunit | — | — |
Pseudomonas syringae pv. syringae B728a | 0.27 | Psyr_0961 | | deoxyribodipyrimidine photo-lyase type I | 0.33 | Psyr_0846 | | acetolactate synthase, large subunit | 0.36 | 25 |
Enterobacter sp. TBS_079 | 0.27 | MPMX20_01343 | | Deoxyribodipyrimidine photo-lyase | 0.35 | MPMX20_04502 | | Acetolactate synthase isozyme 2 large subunit | low | > 85 |
Dickeya dianthicola 67-19 | 0.27 | HGI48_RS06450 | | deoxyribodipyrimidine photo-lyase | 0.34 | HGI48_RS20310 | | acetolactate synthase 2 catalytic subunit | low | > 71 |
Shewanella sp. ANA-3 | 0.27 | Shewana3_1166 | | deoxyribodipyrimidine photo-lyase type I (RefSeq) | 0.35 | Shewana3_0356 | | acetolactate synthase 2 catalytic subunit (RefSeq) | low | > 73 |
Pseudomonas fluorescens FW300-N2E2 | 0.27 | Pf6N2E2_5228 | | Deoxyribodipyrimidine photolyase (EC 4.1.99.3) | 0.32 | Pf6N2E2_5175 | | Acetolactate synthase large subunit (EC 2.2.1.6) | low | > 103 |
Dickeya dianthicola ME23 | 0.27 | DZA65_RS06795 | | deoxyribodipyrimidine photo-lyase | 0.34 | DZA65_RS21350 | | acetolactate synthase 2 catalytic subunit | low | > 75 |
Escherichia coli ECOR38 | 0.27 | HEPCGN_01190 | phrB | deoxyribodipyrimidine photo-lyase | 0.35 | HEPCGN_13365 | ilvG | acetolactate synthase 2 catalytic subunit | low | > 87 |
Escherichia fergusonii Becca | 0.27 | EFB2_03395 | | Deoxyribodipyrimidine photo-lyase | 0.36 | EFB2_04868 | | Acetolactate synthase isozyme 2 large subunit | low | > 86 |
Escherichia coli Nissle 1917 | 0.27 | ECOLIN_RS03790 | | deoxyribodipyrimidine photo-lyase | 0.36 | ECOLIN_RS21650 | | acetolactate synthase 2 catalytic subunit | low | > 55 |
Pseudomonas simiae WCS417 | 0.27 | PS417_03665 | | deoxyribodipyrimidine photolyase | 0.32 | PS417_23810 | | acetolactate synthase 3 catalytic subunit | low | > 88 |
Enterobacter asburiae PDN3 | 0.26 | EX28DRAFT_2278 | | Deoxyribodipyrimidine photolyase | 0.36 | EX28DRAFT_4440 | | acetolactate synthase, large subunit (EC 2.2.1.6) | low | > 76 |
Paraburkholderia graminis OAS925 | 0.26 | ABIE53_004843 | | deoxyribodipyrimidine photo-lyase | 0.50 | ABIE53_002578 | | acetolactate synthase-1/2/3 large subunit | low | > 113 |
Pseudomonas stutzeri RCH2 | 0.26 | Psest_2397 | | Deoxyribodipyrimidine photolyase | 0.33 | Psest_1036 | | acetolactate synthase, large subunit, biosynthetic type | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.26 | AO356_16530 | | deoxyribodipyrimidine photolyase | 0.33 | AO356_16170 | | acetolactate synthase 3 catalytic subunit | low | > 104 |
Acinetobacter radioresistens SK82 | 0.26 | MPMX26_01004 | | Deoxyribodipyrimidine photo-lyase | 0.35 | MPMX26_00472 | | Acetolactate synthase isozyme 3 large subunit | low | > 36 |
Ralstonia sp. UNC404CL21Col | 0.26 | ABZR87_RS08600 | | deoxyribodipyrimidine photo-lyase | 0.36 | ABZR87_RS14955 | | acetolactate synthase 3 catalytic subunit | low | > 80 |
Shewanella loihica PV-4 | 0.26 | Shew_1479 | | deoxyribodipyrimidine photo-lyase (RefSeq) | 0.34 | Shew_0289 | | acetolactate synthase 2 catalytic subunit (RefSeq) | low | > 60 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.26 | GFF4612 | | Deoxyribodipyrimidine photolyase (EC 4.1.99.3) | 0.36 | GFF2904 | | Acetolactate synthase large subunit (EC 2.2.1.6) | low | > 78 |
Shewanella oneidensis MR-1 | 0.26 | SO3384 | phrB | deoxyribodipyrimidine photolyase (NCBI ptt file) | 0.35 | SO4347 | ilvG | acetolactate synthase II, large subunit (NCBI ptt file) | low | > 76 |
Ralstonia solanacearum IBSBF1503 | 0.26 | RALBFv3_RS12600 | | deoxyribodipyrimidine photo-lyase | 0.35 | RALBFv3_RS03050 | | acetolactate synthase 3 large subunit | — | — |
Ralstonia solanacearum UW163 | 0.26 | UW163_RS00965 | | deoxyribodipyrimidine photo-lyase | 0.35 | UW163_RS10675 | | acetolactate synthase 3 large subunit | — | — |
Burkholderia phytofirmans PsJN | 0.26 | BPHYT_RS33665 | | deoxyribodipyrimidine photo-lyase | 0.61 | BPHYT_RS10500 | | acetolactate synthase | low | > 109 |
Variovorax sp. SCN45 | 0.25 | GFF2156 | | Deoxyribodipyrimidine photolyase (EC 4.1.99.3) | 0.34 | GFF1597 | | Acetolactate synthase large subunit (EC 2.2.1.6) | low | > 127 |
Paraburkholderia bryophila 376MFSha3.1 | 0.25 | H281DRAFT_06033 | | deoxyribodipyrimidine photo-lyase type I | 0.59 | H281DRAFT_00356 | | acetolactate synthase, large subunit | 0.25 | 94 |
Vibrio cholerae E7946 ATCC 55056 | 0.25 | CSW01_14320 | | deoxyribodipyrimidine photo-lyase | 0.34 | CSW01_12565 | | acetolactate synthase 3 large subunit | low | > 62 |
Not shown: 1 genomes with orthologs for LRK55_RS07250 only; 18 genomes with orthologs for LRK55_RS09950 only