Conservation of cofitness between JDDGAC_25065 and JDDGAC_00700 in Escherichia coli ECRC98

79 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_25065 lepA translation elongation factor 4 1.0 JDDGAC_00700 cheW chemotaxis protein CheW 0.68 12
Escherichia coli ECOR27 1.00 NOLOHH_13075 lepA translation elongation factor 4 1.00 NOLOHH_16565 cheW chemotaxis protein CheW low > 75
Escherichia coli BL21 1.00 ECD_02463 back-translocating elongation factor EF4, GTPase 1.00 ECD_01858 purine-binding chemotaxis protein — —
Escherichia coli BW25113 1.00 b2569 lepA GTP-binding protein LepA (NCBI) 1.00 b1887 cheW purine-binding chemotaxis protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01138 Elongation factor 4 1.00 OHPLBJKB_01841 Chemotaxis protein CheW low > 73
Escherichia coli ECRC62 1.00 BNILDI_11875 lepA translation elongation factor 4 1.00 BNILDI_15355 cheW chemotaxis protein CheW low > 75
Escherichia coli ECRC99 1.00 KEDOAH_06820 lepA translation elongation factor 4 1.00 KEDOAH_01980 cheW chemotaxis protein CheW — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS14540 translation elongation factor 4 1.00 ECOLIN_RS10775 chemotaxis protein CheW low > 55
Escherichia coli ECRC101 1.00 MCAODC_11930 lepA translation elongation factor 4 1.00 MCAODC_19280 cheW chemotaxis protein CheW low > 87
Escherichia coli ECRC102 1.00 NIAGMN_19170 lepA translation elongation factor 4 1.00 NIAGMN_01935 cheW chemotaxis protein CheW — —
Escherichia coli ECOR38 1.00 HEPCGN_20545 lepA translation elongation factor 4 1.00 HEPCGN_04545 cheW chemotaxis protein CheW low > 87
Escherichia coli ECRC100 1.00 OKFHMN_21400 lepA translation elongation factor 4 1.00 OKFHMN_26125 cheW chemotaxis protein CheW low > 80
Escherichia fergusonii Becca 1.00 EFB2_01327 Elongation factor 4 1.00 EFB2_02056 Chemotaxis protein CheW low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF2477 Translation elongation factor LepA 0.93 GFF1668 Positive regulator of CheA protein activity (CheW) low > 78
Enterobacter asburiae PDN3 0.94 EX28DRAFT_0076 elongation factor 4 0.94 EX28DRAFT_0663 Chemotaxis signal transduction protein low > 76
Enterobacter sp. TBS_079 0.93 MPMX20_03440 Elongation factor 4 0.93 MPMX20_02797 Chemotaxis protein CheW low > 85
Dickeya dadantii 3937 0.92 DDA3937_RS15745 elongation factor 4 0.87 DDA3937_RS13540 chemotaxis protein CheW low > 74
Dickeya dianthicola 67-19 0.92 HGI48_RS15830 elongation factor 4 0.87 HGI48_RS13585 chemotaxis protein CheW low > 71
Dickeya dianthicola ME23 0.92 DZA65_RS16910 elongation factor 4 0.87 DZA65_RS14070 chemotaxis protein CheW 0.76 42
Erwinia tracheiphila SCR3 0.92 LU632_RS15395 lepA translation elongation factor 4 0.84 LU632_RS13555 cheW chemotaxis protein CheW low > 74
Pectobacterium carotovorum WPP14 0.92 HER17_RS05805 translation elongation factor 4 0.85 HER17_RS08105 chemotaxis protein CheW low > 75
Serratia liquefaciens MT49 0.91 IAI46_19560 elongation factor 4 0.85 IAI46_16035 chemotaxis protein CheW low > 86
Rahnella sp. WP5 0.91 EX31_RS21825 elongation factor 4 0.82 EX31_RS11400 chemotaxis protein CheW low > 89
Pantoea sp. MT58 0.89 IAI47_04870 elongation factor 4 0.82 IAI47_08305 chemotaxis protein CheW low > 76
Vibrio cholerae E7946 ATCC 55056 0.85 CSW01_12465 elongation factor 4 0.36 CSW01_19540 chemotaxis protein CheW low > 62
Shewanella sp. ANA-3 0.83 Shewana3_3028 GTP-binding protein LepA (RefSeq) 0.54 Shewana3_2217 CheW protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.83 SO1346 lepA GTP-binding protein LepA (NCBI ptt file) 0.52 SO2122 cheW-1 purine-binding chemotaxis protein CheW (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.82 Shew_1052 GTP-binding protein LepA (RefSeq) 0.44 Shew_0112 CheW protein (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.81 MIT1002_02715 Elongation factor 4 0.30 MIT1002_01110 Chemotaxis protein CheW low > 70
Shewanella amazonensis SB2B 0.80 Sama_0878 GTP-binding protein LepA (RefSeq) 0.38 Sama_3496 biotin synthase (RefSeq) low > 62
Pseudomonas sp. S08-1 0.76 OH686_20065 elongation factor 4 0.27 OH686_02685 Positive regulator of CheA protein activity (CheW) low > 80
Pseudomonas sp. RS175 0.76 PFR28_03525 Elongation factor 4 0.32 PFR28_01431 Chemotaxis protein CheW — —
Pseudomonas putida KT2440 0.76 PP_1431 Elongation factor 4 0.30 PP_4332 Chemotaxis protein CheW — —
Pseudomonas fluorescens SBW25 0.75 PFLU_RS05250 elongation factor 4 0.30 PFLU_RS24980 purine-binding chemotaxis protein CheW low > 109
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS05250 elongation factor 4 0.30 PFLU_RS24980 purine-binding chemotaxis protein CheW low > 109
Pseudomonas fluorescens FW300-N2E2 0.75 Pf6N2E2_5423 Translation elongation factor LepA 0.35 Pf6N2E2_1778 Positive regulator of CheA protein activity (CheW) — —
Pseudomonas fluorescens GW456-L13 0.75 PfGW456L13_4842 Translation elongation factor LepA 0.29 PfGW456L13_4321 Positive regulator of CheA protein activity (CheW) low > 87
Pseudomonas fluorescens FW300-N2C3 0.75 AO356_17485 elongation factor 4 0.34 AO356_29855 hypothetical protein low > 104
Pseudomonas stutzeri RCH2 0.75 Psest_3095 GTP-binding protein LepA 0.30 Psest_1749 Chemotaxis signal transduction protein — —
Pseudomonas simiae WCS417 0.75 PS417_05180 elongation factor 4 0.29 PS417_19650 chemotaxis protein CheW — —
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_04520 elongation factor 4 0.29 AO353_18830 chemotaxis protein CheW low > 101
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_895 Translation elongation factor LepA 0.29 Pf1N1B4_3635 Positive regulator of CheA protein activity (CheW) — —
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_3954 GTP-binding protein LepA 0.31 Psyr_3428 CheW-like protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_3954 GTP-binding protein LepA 0.31 Psyr_3428 CheW-like protein low > 86
Marinobacter adhaerens HP15 0.74 HP15_781 GTP-binding protein LepA 0.30 HP15_2292 purine-binding chemotaxis protein CheW low > 73
Herbaspirillum seropedicae SmR1 0.73 HSERO_RS09650 elongation factor 4 0.61 HSERO_RS14950 purine-binding chemotaxis protein low > 78
Burkholderia phytofirmans PsJN 0.73 BPHYT_RS14380 elongation factor 4 0.66 BPHYT_RS18995 purine-binding chemotaxis protein low > 109
Paraburkholderia bryophila 376MFSha3.1 0.72 H281DRAFT_04360 GTP-binding protein LepA 0.66 H281DRAFT_05743 CheW protein low > 103
Paraburkholderia graminis OAS925 0.72 ABIE53_003038 GTP-binding protein LepA 0.66 ABIE53_000124 purine-binding chemotaxis protein CheW low > 113
Cupriavidus basilensis FW507-4G11 0.71 RR42_RS14055 elongation factor 4 0.68 RR42_RS35800 chemotaxis protein CheW low > 128
Rhodanobacter sp. FW510-T8 0.71 OKGIIK_07885 Elongation factor 4 0.41 OKGIIK_02895 Chemotaxis protein CheW low > 52
Rhodanobacter denitrificans FW104-10B01 0.70 LRK54_RS16955 translation elongation factor 4 0.40 LRK54_RS13650 chemotaxis protein CheW low > 59
Rhodanobacter denitrificans MT42 0.70 LRK55_RS16670 translation elongation factor 4 0.40 LRK55_RS13390 chemotaxis protein CheW low > 63
Paraburkholderia sabiae LMG 24235 0.70 QEN71_RS04600 translation elongation factor 4 0.65 QEN71_RS29005 chemotaxis protein CheW low > 153
Dyella japonica UNC79MFTsu3.2 0.70 ABZR86_RS07165 translation elongation factor 4 0.36 ABZR86_RS22225 chemotaxis protein CheW low > 74
Dechlorosoma suillum PS 0.70 Dsui_2457 GTP-binding protein LepA 0.58 Dsui_1709 chemotaxis signal transduction protein low > 51
Ralstonia solanacearum PSI07 0.70 RPSI07_RS18990 elongation factor 4 0.65 RPSI07_RS06250 chemotaxis protein CheW low > 81
Lysobacter sp. OAE881 0.70 ABIE51_RS13875 translation elongation factor 4 0.51 ABIE51_RS16920 chemotaxis protein CheW low > 62
Castellaniella sp019104865 MT123 0.70 ABCV34_RS08335 translation elongation factor 4 0.54 ABCV34_RS05830 chemotaxis protein CheW — —
Ralstonia sp. UNC404CL21Col 0.69 ABZR87_RS10190 translation elongation factor 4 0.64 ABZR87_RS17965 chemotaxis protein CheW low > 80
Xanthomonas campestris pv. campestris strain 8004 0.69 Xcc-8004.3676.1 Translation elongation factor LepA 0.52 Xcc-8004.2882.1 Positive regulator of CheA protein activity (CheW) low > 74
Variovorax sp. SCN45 0.68 GFF3867 Translation elongation factor LepA 0.60 GFF5730 Positive regulator of CheA protein activity (CheW) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.68 GFF3343 Translation elongation factor LepA 0.56 GFF2450 Positive regulator of CheA protein activity (CheW) low > 90
Acidovorax sp. GW101-3H11 0.68 Ac3H11_1569 Translation elongation factor LepA 0.55 Ac3H11_1422 Positive regulator of CheA protein activity (CheW) low > 79
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS14470 elongation factor 4 0.65 RALBFv3_RS17395 chemotaxis protein CheW low > 76
Ralstonia solanacearum UW163 0.68 UW163_RS11935 elongation factor 4 0.65 UW163_RS21755 chemotaxis protein CheW — —
Ralstonia solanacearum GMI1000 0.68 RS_RS05250 elongation factor 4 0.65 RS_RS23915 chemotaxis protein CheW — —
Magnetospirillum magneticum AMB-1 0.63 AMB_RS19545 elongation factor 4 0.22 AMB_RS01645 chemotaxis protein CheW low > 64
Azospirillum sp. SherDot2 0.62 MPMX19_00092 Elongation factor 4 0.38 MPMX19_01949 Chemotaxis protein CheW — —
Desulfovibrio vulgaris Miyazaki F 0.61 DvMF_2717 GTP-binding protein LepA (RefSeq) 0.33 DvMF_0284 CheW protein (RefSeq) — —
Azospirillum brasilense Sp245 0.61 AZOBR_RS00860 elongation factor 4 0.39 AZOBR_RS14240 chemotaxis protein CheW low > 97
Agrobacterium fabrum C58 0.61 Atu0241 GTP-binding protein LepA 0.30 Atu2075 chemotaxis protein — —
Caulobacter crescentus NA1000 Δfur 0.60 CCNA_01086 GTP-binding protein lepA 0.32 CCNA_00443 chemotaxis protein cheW low > 67
Caulobacter crescentus NA1000 0.60 CCNA_01086 GTP-binding protein lepA 0.32 CCNA_00443 chemotaxis protein cheW low > 66
Desulfovibrio vulgaris Hildenborough JW710 0.60 DVU0703 lepA GTP-binding protein LepA (TIGR) 0.32 DVU1904 cheW-2 chemotaxis protein CheW (TIGR) low > 55
Rhizobium sp. OAE497 0.60 ABIE40_RS01055 translation elongation factor 4 0.35 ABIE40_RS02880 chemotaxis protein CheW low > 107
Sinorhizobium meliloti 1021 0.60 SMc00349 GTP-binding protein LepA 0.35 SMc03008 chemotaxis protein low > 103
Brevundimonas sp. GW460-12-10-14-LB2 0.59 A4249_RS10390 translation elongation factor 4 0.32 A4249_RS15570 chemotaxis protein CheW low > 48
Rhodopseudomonas palustris CGA009 0.59 TX73_001825 translation elongation factor 4 0.22 TX73_000720 chemotaxis protein CheW low > 86
Phaeobacter inhibens DSM 17395 0.58 PGA1_c24090 GTP-binding protein LepA 0.25 PGA1_262p02110 putative chemotaxis protein CheW — —

Not shown: 22 genomes with orthologs for JDDGAC_25065 only; 2 genomes with orthologs for JDDGAC_00700 only