Conservation of cofitness between IAI47_11310 and IAI47_02710 in Pantoea sp. MT58

84 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_11310 redox-regulated ATPase YchF 1.0 IAI47_02710 HlyC/CorC family transporter 0.40 8
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF2784 GTP-binding and nucleic acid-binding protein YchF 0.87 GFF871 Putative membrane protein low > 78
Dickeya dianthicola 67-19 0.94 HGI48_RS10975 redox-regulated ATPase YchF 0.80 HGI48_RS17225 HlyC/CorC family transporter low > 71
Dickeya dianthicola ME23 0.94 DZA65_RS11435 redox-regulated ATPase YchF 0.80 DZA65_RS18310 HlyC/CorC family transporter low > 75
Erwinia tracheiphila SCR3 0.94 LU632_RS13950 ychF redox-regulated ATPase YchF 0.87 LU632_RS02100 hemolysin family protein low > 74
Dickeya dadantii 3937 0.94 DDA3937_RS11035 redox-regulated ATPase YchF 0.80 DDA3937_RS17170 HlyC/CorC family transporter low > 74
Escherichia coli ECRC102 0.93 NIAGMN_27825 ychF redox-regulated ATPase YchF 0.87 NIAGMN_09865 paeA Polyamine export protein — —
Escherichia coli BW25113 0.93 b1203 ychF translation-associated GTPase (NCBI) 0.87 b4218 ytfL predicted inner membrane protein (NCBI) — —
Escherichia coli ECRC99 0.93 KEDOAH_25405 ychF redox-regulated ATPase YchF 0.87 KEDOAH_16140 paeA Polyamine export protein — —
Escherichia coli ECRC101 0.93 OKFHMN_28410 ychF redox-regulated ATPase YchF 0.87 OKFHMN_12015 paeA Polyamine export protein — —
Escherichia coli ECRC98 0.93 JDDGAC_06165 ychF redox-regulated ATPase YchF 0.87 JDDGAC_15655 paeA Polyamine export protein — —
Escherichia coli ECOR27 0.93 NOLOHH_20650 ychF redox-regulated ATPase YchF 0.87 NOLOHH_04280 paeA Polyamine export protein — —
Escherichia coli ECOR38 0.93 HEPCGN_24875 ychF redox-regulated ATPase YchF 0.87 HEPCGN_10215 paeA Polyamine export protein — —
Escherichia coli ECRC101 0.93 MCAODC_21850 ychF redox-regulated ATPase YchF 0.87 MCAODC_02530 paeA Polyamine export protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.93 OHPLBJKB_02484 Ribosome-binding ATPase YchF 0.87 OHPLBJKB_03816 hypothetical protein low > 73
Escherichia fergusonii Becca 0.93 EFB2_02724 Ribosome-binding ATPase YchF 0.87 EFB2_04311 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.93 ECOLIN_RS07280 redox-regulated ATPase YchF 0.87 ECOLIN_RS24495 hemolysin family protein — —
Escherichia coli BL21 0.93 ECD_01178 catalase inhibitor protein; ATPase, K+-dependent, ribosome-associated 0.87 ECD_04089 UPF0053 family inner membrane protein — —
Escherichia coli ECRC62 0.93 BNILDI_18805 ychF redox-regulated ATPase YchF 0.86 BNILDI_07240 tlyC Polyamine export protein — —
Pectobacterium carotovorum WPP14 0.93 HER17_RS10445 redox-regulated ATPase YchF 0.82 HER17_RS03970 hemolysin family protein low > 75
Serratia liquefaciens MT49 0.91 IAI46_10240 redox-regulated ATPase YchF 0.84 IAI46_01760 HlyC/CorC family transporter — —
Rahnella sp. WP5 0.90 EX31_RS07380 redox-regulated ATPase YchF 0.81 EX31_RS08705 HlyC/CorC family transporter low > 89
Enterobacter sp. TBS_079 0.89 MPMX20_02645 Ribosome-binding ATPase YchF 0.87 MPMX20_00495 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.89 EX28DRAFT_0821 GTP-binding protein YchF 0.87 EX28DRAFT_3404 Hemolysins and related proteins containing CBS domains — —
Klebsiella michiganensis M5al 0.89 BWI76_RS17485 GTP-binding protein YchF 0.87 BWI76_RS02765 membrane protein — —
Shewanella amazonensis SB2B 0.81 Sama_2571 GTP-dependent nucleic acid-binding protein EngD (RefSeq) 0.57 Sama_3284 hemolysin, putative (RefSeq) low > 62
Shewanella oneidensis MR-1 0.80 SO1185 conserved hypothetical protein TIGR00092 (NCBI ptt file) 0.59 SO4351 CBS domain protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.80 Shewana3_1012 GTP-dependent nucleic acid-binding protein EngD (RefSeq) 0.60 Shewana3_0353 hypothetical protein (RefSeq) low > 73
Shewanella loihica PV-4 0.78 Shew_2919 translation-associated GTPase (RefSeq) 0.60 Shew_0284 hypothetical protein (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.74 CSW01_10875 redox-regulated ATPase YchF 0.58 CSW01_18340 HlyC/CorC family transporter low > 62
Cupriavidus basilensis FW507-4G11 0.73 RR42_RS18365 GTP-binding protein 0.44 RR42_RS04375 magnesium transporter low > 128
Pseudomonas sp. S08-1 0.73 OH686_07965 GTP-binding and nucleic acid-binding protein YchF 0.11 OH686_13455 Phosphate regulon metal ion transporter containing CBS domains low > 80
Pseudomonas putida KT2440 0.73 PP_0719 ribosome-associated potassium-dependent informational ATP/GTPase 0.12 PP_5322 putative metal ion transporter low > 96
Acinetobacter radioresistens SK82 0.72 MPMX26_01861 Ribosome-binding ATPase YchF 0.55 MPMX26_02321 hypothetical protein low > 36
Pseudomonas sp. RS175 0.72 PFR28_03664 Ribosome-binding ATPase YchF 0.12 PFR28_04481 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.72 AO353_14740 GTP-binding protein 0.13 AO353_09865 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.72 Pf1N1B4_2912 GTP-binding and nucleic acid-binding protein YchF 0.12 Pf1N1B4_2042 Phosphate regulon metal ion transporter containing CBS domains low > 87
Pseudomonas fluorescens GW456-L13 0.72 PfGW456L13_1574 GTP-binding and nucleic acid-binding protein YchF 0.12 PfGW456L13_760 Phosphate regulon metal ion transporter containing CBS domains low > 87
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_16450 GTP-binding protein 0.12 AO356_11010 hypothetical protein low > 104
Pseudomonas syringae pv. syringae B728a 0.71 Psyr_0941 Conserved hypothetical protein 92 0.14 Psyr_5034 CBS:Protein of unknown function DUF21:Transporter-associated region low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.71 Psyr_0941 Conserved hypothetical protein 92 0.14 Psyr_5034 CBS:Protein of unknown function DUF21:Transporter-associated region low > 86
Dyella japonica UNC79MFTsu3.2 0.71 ABZR86_RS22010 redox-regulated ATPase YchF 0.25 ABZR86_RS19900 hemolysin family protein low > 74
Pseudomonas simiae WCS417 0.71 PS417_03560 GTP-binding protein 0.12 PS417_28050 hypothetical protein low > 88
Ralstonia solanacearum GMI1000 0.71 RS_RS14520 redox-regulated ATPase YchF 0.46 RS_RS11430 HlyC/CorC family transporter low > 80
Ralstonia sp. UNC404CL21Col 0.71 ABZR87_RS02220 redox-regulated ATPase YchF 0.46 ABZR87_RS15885 hemolysin family protein low > 80
Lysobacter sp. OAE881 0.70 ABIE51_RS05745 redox-regulated ATPase YchF 0.21 ABIE51_RS06575 hemolysin family protein low > 62
Pseudomonas fluorescens SBW25 0.70 PFLU_RS03610 redox-regulated ATPase YchF 0.12 PFLU_RS29735 HlyC/CorC family transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.70 PFLU_RS03610 redox-regulated ATPase YchF 0.12 PFLU_RS29735 HlyC/CorC family transporter low > 109
Ralstonia solanacearum UW163 0.70 UW163_RS07055 redox-regulated ATPase YchF 0.45 UW163_RS09720 HlyC/CorC family transporter — —
Ralstonia solanacearum IBSBF1503 0.70 RALBFv3_RS06570 redox-regulated ATPase YchF 0.45 RALBFv3_RS03950 HlyC/CorC family transporter low > 76
Ralstonia solanacearum PSI07 0.69 RPSI07_RS10660 redox-regulated ATPase YchF 0.45 RPSI07_RS13270 HlyC/CorC family transporter low > 81
Dechlorosoma suillum PS 0.69 Dsui_1039 GTP-binding protein YchF 0.28 Dsui_3105 CBS domain-containing protein — —
Xanthomonas campestris pv. campestris strain 8004 0.69 Xcc-8004.4168.1 GTP-binding and nucleic acid-binding protein YchF 0.21 Xcc-8004.3156.1 Magnesium and cobalt efflux protein CorC low > 74
Herbaspirillum seropedicae SmR1 0.69 HSERO_RS20405 GTP-binding protein YchF 0.51 HSERO_RS08405 membrane protein 0.33 14
Variovorax sp. SCN45 0.69 GFF2141 GTP-binding and nucleic acid-binding protein YchF 0.55 GFF2520 UPF0053 inner membrane protein YtfL low > 127
Rhodanobacter denitrificans FW104-10B01 0.68 LRK54_RS03675 redox-regulated ATPase YchF 0.20 LRK54_RS12975 hemolysin family protein low > 59
Rhodanobacter sp. FW510-T8 0.68 OKGIIK_10565 Ribosome-binding ATPase YchF 0.23 OKGIIK_02350 tlyC Hemolysin-related protein, contains CBS domains, UPF0053 family low > 52
Rhodanobacter denitrificans MT42 0.68 LRK55_RS03425 redox-regulated ATPase YchF 0.20 LRK55_RS12675 hemolysin family protein low > 63
Hydrogenophaga sp. GW460-11-11-14-LB1 0.68 GFF630 GTP-binding and nucleic acid-binding protein YchF 0.27 GFF4625 Magnesium and cobalt efflux protein CorC low > 90
Variovorax sp. OAS795 0.68 ABID97_RS24750 redox-regulated ATPase YchF 0.57 ABID97_RS07170 hemolysin family protein low > 91
Acidovorax sp. GW101-3H11 0.65 Ac3H11_4001 GTP-binding and nucleic acid-binding protein YchF 0.54 Ac3H11_4775 Putative membrane protein — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.60 CA264_07495 GTP-binding protein YchF 0.19 CA264_14350 hemolysin low > 74
Sinorhizobium meliloti 1021 0.59 SMc02695 GTP-dependent nucleic acid-binding protein EngD 0.28 SMc00240 hypothetical protein low > 103
Rhodopseudomonas palustris CGA009 0.59 TX73_022570 redox-regulated ATPase YchF 0.21 TX73_014560 hemolysin family protein low > 86
Dinoroseobacter shibae DFL-12 0.58 Dshi_0954 GTP-binding protein YchF (RefSeq) 0.20 Dshi_3672 protein of unknown function DUF21 (RefSeq) — —
Bacteroides ovatus ATCC 8483 0.57 BACOVA_02821 GTP-binding protein YchF 0.22 BACOVA_01289 hypothetical protein — —
Bacteroides thetaiotaomicron VPI-5482 0.57 BT3116 GTP-binding protein (NCBI ptt file) 0.22 BT0148 putative hemolysin (NCBI ptt file) — —
Magnetospirillum magneticum AMB-1 0.57 AMB_RS21985 redox-regulated ATPase YchF 0.23 AMB_RS10875 HlyC/CorC family transporter — —
Azospirillum sp. SherDot2 0.57 MPMX19_01641 Ribosome-binding ATPase YchF 0.27 MPMX19_04101 hypothetical protein — —
Parabacteroides merdae CL09T00C40 0.57 HMPREF1078_RS06345 redox-regulated ATPase YchF 0.26 HMPREF1078_RS00430 hemolysin family protein low > 61
Phocaeicola dorei CL03T12C01 0.56 ABI39_RS05450 redox-regulated ATPase YchF 0.21 ABI39_RS04720 HlyC/CorC family transporter low > 72
Azospirillum brasilense Sp245 0.56 AZOBR_RS30645 GTP-binding protein YchF 0.29 AZOBR_RS16970 hypothetical protein — —
Phocaeicola vulgatus CL09T03C04 0.56 HMPREF1058_RS11490 redox-regulated ATPase YchF 0.21 HMPREF1058_RS12080 HlyC/CorC family transporter low > 67
Rhizobium sp. OAE497 0.56 ABIE40_RS13100 redox-regulated ATPase YchF 0.21 ABIE40_RS21835 hemolysin family protein — —
Sphingomonas koreensis DSMZ 15582 0.56 Ga0059261_3227 GTP-binding protein YchF 0.25 Ga0059261_1443 Hemolysins and related proteins containing CBS domains low > 68
Rhodospirillum rubrum S1H 0.56 Rru_A3748 hypothetical protein (NCBI) 0.26 Rru_A0756 hypothetical protein (NCBI) low > 58
Caulobacter crescentus NA1000 0.55 CCNA_00512 GTP-binding protein, probable translation factor 0.22 CCNA_00369 magnesium and cobalt efflux protein corC-like protein low > 66
Caulobacter crescentus NA1000 Δfur 0.55 CCNA_00512 GTP-binding protein, probable translation factor 0.22 CCNA_00369 magnesium and cobalt efflux protein corC-like protein low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.55 A4249_RS09035 redox-regulated ATPase YchF 0.23 A4249_RS08175 hemolysin family protein low > 48
Agrobacterium fabrum C58 0.55 Atu2233 GTP-binding protein 0.20 Atu3732 hemolysin — —
Bosea sp. OAE506 0.55 ABIE41_RS11295 redox-regulated ATPase YchF 0.20 ABIE41_RS13905 hemolysin family protein — —
Desulfovibrio vulgaris Hildenborough JW710 0.53 DVU1429 GTP-binding protein (TIGR) 0.24 DVU2148 CBS/transporter associated domain protein (TIGR) low > 55
Bacteroides stercoris CC31F 0.52 HMPREF1181_RS02000 redox-regulated ATPase YchF 0.21 HMPREF1181_RS05310 HlyC/CorC family transporter low > 56
Desulfovibrio vulgaris Miyazaki F 0.51 DvMF_0234 GTP-dependent nucleic acid-binding protein EngD (RefSeq) 0.26 DvMF_0831 protein of unknown function DUF21 (RefSeq) low > 51
Bifidobacterium breve UCC2003 0.47 BBR_RS14650 redox-regulated ATPase YchF 0.15 BBR_RS10445 HlyC/CorC family transporter — —

Not shown: 16 genomes with orthologs for IAI47_11310 only; 1 genomes with orthologs for IAI47_02710 only