Conservation of cofitness between IAI46_22685 and IAI46_24600 in Serratia liquefaciens MT49

79 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_22685 metalloprotease TldD 1.0 IAI46_24600 glycerol kinase GlpK 0.58 11
Dickeya dadantii 3937 0.88 DDA3937_RS01460 metalloprotease TldD 0.93 DDA3937_RS00890 glycerol kinase GlpK low > 74
Rahnella sp. WP5 0.87 EX31_RS12265 metalloprotease TldD 0.93 EX31_RS14270 glycerol kinase GlpK low > 89
Dickeya dianthicola 67-19 0.87 HGI48_RS01380 metalloprotease TldD 0.93 HGI48_RS20485 glycerol kinase GlpK low > 71
Dickeya dianthicola ME23 0.86 DZA65_RS01440 metalloprotease TldD 0.93 DZA65_RS21530 glycerol kinase GlpK low > 75
Pantoea sp. MT58 0.86 IAI47_02465 metalloprotease TldD 0.91 IAI47_00825 glycerol kinase GlpK low > 76
Pectobacterium carotovorum WPP14 0.86 HER17_RS20140 metalloprotease TldD 0.92 HER17_RS00825 glycerol kinase GlpK low > 75
Enterobacter asburiae PDN3 0.84 EX28DRAFT_3295 Predicted Zn-dependent proteases and their inactivated homologs 0.90 EX28DRAFT_4399 glycerol kinase low > 76
Enterobacter sp. TBS_079 0.84 MPMX20_04151 Metalloprotease TldD 0.89 MPMX20_04543 Glycerol kinase low > 85
Escherichia fergusonii Becca 0.84 EFB2_00586 Metalloprotease TldD 0.89 EFB2_04692 Glycerol kinase low > 86
Escherichia coli ECOR38 0.84 HEPCGN_16620 tldD metalloprotease TldD 0.89 HEPCGN_12420 glpK glycerol kinase GlpK low > 87
Escherichia coli ECRC62 0.84 BNILDI_01980 tldD metalloprotease TldD 0.89 BNILDI_05620 glpK glycerol kinase GlpK low > 75
Escherichia coli ECOR27 0.84 NOLOHH_09555 tldD metalloprotease TldD 0.89 NOLOHH_05910 glpK glycerol kinase GlpK low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.84 OHPLBJKB_00460 Metalloprotease TldD 0.89 OHPLBJKB_04125 Glycerol kinase low > 73
Escherichia coli BW25113 0.84 b3244 tldD predicted peptidase (NCBI) 0.89 b3926 glpK glycerol kinase (NCBI) low > 76
Escherichia coli BL21 0.84 ECD_03104 putative peptidase 0.89 ECD_03811 glycerol kinase low > 61
Escherichia coli Nissle 1917 0.84 ECOLIN_RS18595 metalloprotease TldD 0.89 ECOLIN_RS22610 glycerol kinase GlpK low > 55
Klebsiella michiganensis M5al 0.84 BWI76_RS25470 metalloprotease TldD 0.90 BWI76_RS27515 glycerol kinase low > 92
Escherichia coli ECRC101 0.83 MCAODC_08275 tldD metalloprotease TldD 0.89 MCAODC_04275 glpK glycerol kinase GlpK low > 87
Escherichia coli ECRC98 0.83 JDDGAC_21380 tldD metalloprotease TldD 0.89 JDDGAC_17400 glpK glycerol kinase GlpK low > 86
Escherichia coli ECRC100 0.83 OKFHMN_17755 tldD metalloprotease TldD 0.89 OKFHMN_13775 glpK glycerol kinase GlpK low > 80
Escherichia coli ECRC99 0.83 KEDOAH_10395 tldD metalloprotease TldD 0.89 KEDOAH_14385 glpK glycerol kinase GlpK
Escherichia coli ECRC102 0.83 NIAGMN_15515 tldD metalloprotease TldD 0.89 NIAGMN_11530 glpK glycerol kinase GlpK
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF2140 TldD protein, part of TldE/TldD proteolytic complex 0.90 GFF2307 Glycerol kinase (EC 2.7.1.30) low > 78
Erwinia tracheiphila SCR3 0.82 LU632_RS21420 tldD metalloprotease TldD 0.90 LU632_RS19705 glpK glycerol kinase GlpK low > 74
Vibrio cholerae E7946 ATCC 55056 0.68 CSW01_02220 metalloprotease TldD 0.80 CSW01_17900 glycerol kinase low > 62
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_4156 microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 0.78 Psyr_3905 glycerol kinase low > 86
Alteromonas macleodii MIT1002 0.65 MIT1002_00227 protease TldD 0.53 MIT1002_00198 Glycerol kinase low > 70
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_4156 microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 0.78 Psyr_3905 glycerol kinase low > 86
Pseudomonas putida KT2440 0.65 PP_0940 putative protease involved in Microcin B17 maturation and in sensitivity to the DNA gyrase inhibitor LetD 0.78 PP_1075 glycerol kinase low > 96
Shewanella sp. ANA-3 0.63 Shewana3_3641 microcin-processing peptidase 2 (RefSeq) 0.76 Shewana3_3756 glycerol kinase (RefSeq) low > 73
Shewanella loihica PV-4 0.63 Shew_0410 peptidase U62, modulator of DNA gyrase (RefSeq) 0.73 Shew_3466 glycerol kinase (RefSeq) low > 60
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS04340 metalloprotease TldD 0.76 PFLU_RS05660 glycerol kinase GlpK 0.30 105
Pseudomonas fluorescens SBW25 0.63 PFLU_RS04340 metalloprotease TldD 0.76 PFLU_RS05660 glycerol kinase GlpK 0.44 82
Pseudomonas fluorescens FW300-N2E3 0.63 AO353_05215 protease TldD 0.76 AO353_04180 glycerol kinase low > 101
Pseudomonas fluorescens GW456-L13 0.63 PfGW456L13_5026 TldD protein, part of TldE/TldD proteolytic complex 0.76 PfGW456L13_1734 Glycerol kinase (EC 2.7.1.30) low > 87
Pseudomonas simiae WCS417 0.63 PS417_04285 protease TldD 0.75 PS417_05575 Glycerol kinase (EC 2.7.1.30) (from data) low > 88
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_07095 protease TldD 0.76 AO356_18250 glycerol kinase low > 104
Pseudomonas fluorescens FW300-N1B4 0.62 Pf1N1B4_1092 TldD protein, part of TldE/TldD proteolytic complex 0.77 Pf1N1B4_767 Glycerol kinase (EC 2.7.1.30) low > 87
Pseudomonas fluorescens FW300-N2E2 0.62 Pf6N2E2_3280 TldD protein, part of TldE/TldD proteolytic complex 0.76 Pf6N2E2_5574 Glycerol kinase (EC 2.7.1.30) low > 103
Pseudomonas sp. S08-1 0.62 OH686_08580 TldD protein, part of TldE/TldD proteolytic complex 0.53 OH686_20375 glycerol kinase low > 80
Dyella japonica UNC79MFTsu3.2 0.62 ABZR86_RS21715 metalloprotease TldD 0.62 ABZR86_RS20035 glycerol kinase GlpK low > 74
Pseudomonas sp. RS175 0.62 PFR28_00161 Metalloprotease TldD 0.76 PFR28_03368 Glycerol kinase low > 88
Rhodanobacter sp. FW510-T8 0.61 OKGIIK_10280 tldD metalloprotease TldD 0.56 OKGIIK_00030 glpK glycerol kinase GlpK low > 52
Shewanella amazonensis SB2B 0.61 Sama_0474 TldD protein (RefSeq) 0.72 Sama_0341 glycerol kinase (RefSeq) low > 62
Pseudomonas stutzeri RCH2 0.61 Psest_3320 Predicted Zn-dependent proteases and their inactivated homologs 0.75 Psest_2773 glycerol kinase low > 67
Shewanella oneidensis MR-1 0.60 SO4091 tldD tldD protein (NCBI ptt file) 0.75 SO4230 glpK glycerol kinase (NCBI ptt file) low > 76
Rhodanobacter denitrificans MT42 0.60 LRK55_RS03145 metalloprotease TldD 0.58 LRK55_RS06280 glycerol kinase GlpK low > 63
Rhodanobacter denitrificans FW104-10B01 0.60 LRK54_RS03395 metalloprotease TldD 0.58 LRK54_RS06535 glycerol kinase GlpK low > 59
Xanthomonas campestris pv. campestris strain 8004 0.59 Xcc-8004.1883.1 TldD protein, part of TldE/TldD proteolytic complex 0.62 Xcc-8004.469.1 Glycerol kinase (EC 2.7.1.30) low > 74
Ralstonia solanacearum PSI07 0.58 RPSI07_RS11850 metalloprotease TldD 0.57 RPSI07_RS09850 glycerol kinase low > 81
Ralstonia solanacearum GMI1000 0.58 RS_RS13315 metalloprotease TldD 0.57 RS_RS15335 glycerol kinase low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.58 GFF580 TldD protein, part of TldE/TldD proteolytic complex 0.53 GFF2807 Glycerol kinase (EC 2.7.1.30) low > 90
Ralstonia sp. UNC404CL21Col 0.58 ABZR87_RS01105 metalloprotease TldD 0.57 ABZR87_RS03055 glycerol kinase GlpK low > 80
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS05875 protease TldD 0.56 RR42_RS13810 glycerol kinase low > 128
Ralstonia solanacearum IBSBF1503 0.57 RALBFv3_RS05455 metalloprotease TldD 0.57 RALBFv3_RS07395 glycerol kinase low > 76
Ralstonia solanacearum UW163 0.57 UW163_RS08170 metalloprotease TldD 0.57 UW163_RS06225 glycerol kinase
Acidovorax sp. GW101-3H11 0.57 Ac3H11_4036 TldD protein, part of TldE/TldD proteolytic complex 0.52 Ac3H11_789 Glycerol kinase (EC 2.7.1.30) low > 79
Castellaniella sp019104865 MT123 0.57 ABCV34_RS02590 metalloprotease TldD 0.53 ABCV34_RS05865 glycerol kinase GlpK low > 48
Herbaspirillum seropedicae SmR1 0.57 HSERO_RS07155 peptidase C69 0.57 HSERO_RS04875 glycerol kinase low > 78
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_04688 microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 0.62 H281DRAFT_04229 glycerol kinase low > 103
Paraburkholderia graminis OAS925 0.56 ABIE53_000851 TldD protein 0.62 ABIE53_003469 glycerol kinase low > 113
Variovorax sp. SCN45 0.56 GFF4449 TldD protein, part of TldE/TldD proteolytic complex 0.55 GFF2679 Glycerol kinase (EC 2.7.1.30) low > 127
Variovorax sp. OAS795 0.56 ABID97_RS06335 metalloprotease TldD 0.55 ABID97_RS19965 glycerol kinase GlpK low > 91
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS03540 peptidase C69 0.63 BPHYT_RS16495 glycerol kinase low > 109
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS26555 metalloprotease TldD 0.61 QEN71_RS02230 glycerol kinase GlpK 0.79 126
Rhodospirillum rubrum S1H 0.51 Rru_A0567 Peptidase U62, modulator of DNA gyrase (NCBI) 0.47 Rru_A2009 Glycerol kinase (NCBI) 0.48 34
Rhizobium sp. OAE497 0.50 ABIE40_RS04050 metalloprotease TldD 0.53 ABIE40_RS13710 glycerol kinase GlpK low > 107
Sphingomonas koreensis DSMZ 15582 0.50 Ga0059261_2252 Predicted Zn-dependent proteases and their inactivated homologs 0.41 Ga0059261_0833 Glycerol kinase low > 68
Agrobacterium fabrum C58 0.49 Atu0765 TldD 0.50 Atu3890 glycerol kinase low > 89
Brevundimonas sp. GW460-12-10-14-LB2 0.49 A4249_RS10860 metalloprotease TldD 0.44 A4249_RS13260 glycerol kinase GlpK low > 48
Azospirillum sp. SherDot2 0.49 MPMX19_00882 Metalloprotease TldD 0.49 MPMX19_05974 Glycerol kinase low > 112
Azospirillum brasilense Sp245 0.49 AZOBR_RS10600 peptidase C69 0.50 AZOBR_RS25905 glycerol kinase low > 97
Sinorhizobium meliloti 1021 0.48 SMc00960 hypothetical protein 0.52 SM_b21009 Glycerol kinase (EC 2.7.1.30) (from data) low > 103
Caulobacter crescentus NA1000 Δfur 0.47 CCNA_03522 Zn-dependent protease TldD 0.42 CCNA_01281 glycerol kinase low > 67
Caulobacter crescentus NA1000 0.47 CCNA_03522 Zn-dependent protease TldD 0.42 CCNA_01281 glycerol kinase low > 66
Rhodopseudomonas palustris CGA009 0.47 TX73_004255 metalloprotease TldD 0.47 TX73_019190 glycerol kinase GlpK 0.32 80
Phaeobacter inhibens DSM 17395 0.46 PGA1_c06240 protein TldD 0.49 PGA1_c32030 glycerol kinase GlpK low > 62
Dinoroseobacter shibae DFL-12 0.45 Dshi_1139 peptidase U62 modulator of DNA gyrase (RefSeq) 0.51 Dshi_3420 Glycerol kinase (EC 2.7.1.30) (from data) low > 64
Parabacteroides merdae CL09T00C40 0.37 HMPREF1078_RS03620 TldD/PmbA family protein 0.58 HMPREF1078_RS00735 glycerol kinase GlpK low > 61

Not shown: 9 genomes with orthologs for IAI46_22685 only; 13 genomes with orthologs for IAI46_24600 only