| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Herbaspirillum seropedicae SmR1 | 1.0 | HSERO_RS00910 | | peptidase | 1.0 | HSERO_RS02315 | | transcriptional regulator | 0.49 | 6 |
| Cupriavidus basilensis FW507-4G11 | 0.83 | RR42_RS01060 | | peptidase | 0.50 | RR42_RS15875 | | hypothetical protein | low | > 128 |
| Variovorax sp. SCN45 | 0.81 | GFF4484 | | ATP-dependent protease subunit HslV (EC 3.4.25.2) | 0.42 | GFF2157 | | UPF0301 protein YqgE | low | > 127 |
| Dechlorosoma suillum PS | 0.80 | Dsui_0581 | | ATP-dependent protease HslVU, peptidase subunit | 0.43 | Dsui_0593 | | putative transcriptional regulator | low | > 51 |
| Castellaniella sp019104865 MT123 | 0.79 | ABCV34_RS13415 | | ATP-dependent protease subunit HslV | 0.41 | ABCV34_RS10730 | | YqgE/AlgH family protein | low | > 48 |
| Variovorax sp. OAS795 | 0.79 | ABID97_RS06180 | | ATP-dependent protease subunit HslV | 0.42 | ABID97_RS24675 | | YqgE/AlgH family protein | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.78 | Ac3H11_2004 | | ATP-dependent protease HslV (EC 3.4.25.-) | 0.42 | Ac3H11_3981 | | UPF0301 protein YqgE | low | > 79 |
| Paraburkholderia graminis OAS925 | 0.77 | ABIE53_000422 | | ATP-dependent HslUV protease subunit HslV | 0.49 | ABIE53_001128 | | putative transcriptional regulator | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.77 | H281DRAFT_02206 | | HslV component of HslUV peptidase. Threonine peptidase. MEROPS family T01B | 0.49 | H281DRAFT_04814 | | putative transcriptional regulator | low | > 103 |
| Ralstonia solanacearum PSI07 | 0.77 | RPSI07_RS23735 | | ATP-dependent protease subunit HslV | 0.53 | RPSI07_RS20650 | | YqgE/AlgH family protein | low | > 81 |
| Burkholderia phytofirmans PsJN | 0.77 | BPHYT_RS01635 | | ATP-dependent protease subunit HslV | 0.49 | BPHYT_RS04220 | | hypothetical protein | — | — |
| Ralstonia sp. UNC404CL21Col | 0.77 | ABZR87_RS05115 | | ATP-dependent protease subunit HslV | 0.50 | ABZR87_RS08610 | | YqgE/AlgH family protein | low | > 80 |
| Ralstonia solanacearum UW163 | 0.77 | UW163_RS03950 | | ATP-dependent protease subunit HslV | 0.53 | UW163_RS00955 | | DUF179 domain-containing protein | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.77 | RALBFv3_RS09630 | | ATP-dependent protease subunit HslV | 0.53 | RALBFv3_RS12610 | | DUF179 domain-containing protein | low | > 76 |
| Ralstonia solanacearum GMI1000 | 0.76 | RS_RS00215 | | HslU--HslV peptidase proteolytic subunit | 0.52 | RS_RS03395 | | YqgE/AlgH family protein | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.76 | QEN71_RS00335 | | ATP-dependent protease subunit HslV | 0.51 | QEN71_RS25795 | | YqgE/AlgH family protein | low | > 153 |
| Marinobacter adhaerens HP15 | 0.70 | HP15_466 | | ATP-dependent protease peptidase subunit | 0.36 | HP15_3510 | | transcriptional regulator | low | > 73 |
| Kangiella aquimarina DSM 16071 | 0.70 | B158DRAFT_0748 | | ATP-dependent protease HslVU, peptidase subunit | 0.36 | B158DRAFT_0191 | | Putative transcriptional regulator | low | > 40 |
| Shewanella amazonensis SB2B | 0.70 | Sama_0441 | | ATP-dependent protease peptidase subunit (RefSeq) | 0.35 | Sama_2472 | | putative transcriptional regulator (RefSeq) | low | > 62 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.70 | GFF552 | | ATP-dependent protease HslV (EC 3.4.25.-) | 0.42 | GFF648 | | UPF0301 protein YqgE | low | > 90 |
| Dickeya dadantii 3937 | 0.69 | DDA3937_RS00920 | | ATP-dependent protease subunit HslV | 0.36 | DDA3937_RS18565 | | YqgE/AlgH family protein | low | > 74 |
| Shewanella loihica PV-4 | 0.69 | Shew_0375 | | ATP-dependent protease peptidase subunit (RefSeq) | 0.31 | Shew_1144 | | hypothetical protein (RefSeq) | — | — |
| Serratia liquefaciens MT49 | 0.69 | IAI46_24570 | | ATP-dependent protease subunit HslV | 0.35 | IAI46_21395 | | YqgE/AlgH family protein | low | > 86 |
| Dickeya dianthicola 67-19 | 0.69 | HGI48_RS20455 | | ATP-dependent protease subunit HslV | 0.36 | HGI48_RS18500 | | YqgE/AlgH family protein | low | > 71 |
| Dickeya dianthicola ME23 | 0.69 | DZA65_RS21500 | | ATP-dependent protease subunit HslV | 0.36 | DZA65_RS19635 | | YqgE/AlgH family protein | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.68 | HER17_RS00855 | | ATP-dependent protease subunit HslV | 0.35 | HER17_RS02630 | | YqgE/AlgH family protein | low | > 75 |
| Dyella japonica UNC79MFTsu3.2 | 0.68 | ABZR86_RS15035 | | ATP-dependent protease subunit HslV | 0.35 | ABZR86_RS10380 | | YqgE/AlgH family protein | — | — |
| Rahnella sp. WP5 | 0.67 | EX31_RS14240 | | ATP-dependent protease subunit HslV | 0.33 | EX31_RS02670 | | YqgE/AlgH family protein | low | > 89 |
| Erwinia tracheiphila SCR3 | 0.67 | LU632_RS19670 | hslV | ATP-dependent protease subunit HslV | 0.35 | LU632_RS05475 | | YqgE/AlgH family protein | low | > 74 |
| Escherichia coli BW25113 | 0.66 | b3932 | hslV | ATP-dependent protease peptidase subunit (NCBI) | 0.36 | b2948 | yqgE | orf, hypothetical protein (VIMSS) | low | > 76 |
| Escherichia coli ECRC101 | 0.66 | MCAODC_04235 | hslV | ATP-dependent protease subunit HslV | 0.37 | MCAODC_09790 | yqgE | YqgE/AlgH family protein | low | > 87 |
| Escherichia coli ECOR27 | 0.66 | NOLOHH_05880 | hslV | ATP-dependent protease subunit HslV | 0.37 | NOLOHH_11140 | yqgE | YqgE/AlgH family protein | low | > 75 |
| Escherichia fergusonii Becca | 0.66 | EFB2_04686 | | ATP-dependent protease subunit HslV | 0.37 | EFB2_00954 | | hypothetical protein | low | > 86 |
| Escherichia coli ECRC99 | 0.66 | KEDOAH_14425 | hslV | ATP-dependent protease subunit HslV | 0.36 | KEDOAH_08870 | algH | YqgE/AlgH family protein | — | — |
| Escherichia coli ECRC100 | 0.66 | OKFHMN_13735 | hslV | ATP-dependent protease subunit HslV | 0.37 | OKFHMN_19270 | yqgE | YqgE/AlgH family protein | low | > 80 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.66 | OHPLBJKB_04119 | | ATP-dependent protease subunit HslV | 0.37 | OHPLBJKB_00770 | | hypothetical protein | low | > 73 |
| Escherichia coli ECRC98 | 0.66 | JDDGAC_17360 | hslV | ATP-dependent protease subunit HslV | 0.37 | JDDGAC_22900 | yqgE | YqgE/AlgH family protein | low | > 86 |
| Escherichia coli ECRC102 | 0.66 | NIAGMN_11490 | hslV | ATP-dependent protease subunit HslV | 0.37 | NIAGMN_17035 | yqgE | YqgE/AlgH family protein | — | — |
| Escherichia coli Nissle 1917 | 0.66 | ECOLIN_RS22640 | | ATP-dependent protease subunit HslV | 0.36 | ECOLIN_RS16400 | | YqgE/AlgH family protein | low | > 55 |
| Escherichia coli BL21 | 0.66 | ECD_03817 | | peptidase component of the HslUV protease | 0.36 | ECD_02778 | | uncharacterized protein | low | > 61 |
| Escherichia coli ECOR38 | 0.66 | HEPCGN_12380 | hslV | ATP-dependent protease subunit HslV | 0.37 | HEPCGN_18575 | yqgE | YqgE/AlgH family protein | low | > 87 |
| Escherichia coli ECRC62 | 0.66 | BNILDI_05650 | hslV | ATP-dependent protease subunit HslV | 0.37 | BNILDI_09720 | yqgE | YqgE/AlgH family protein | low | > 75 |
| Pantoea sp. MT58 | 0.66 | IAI47_00850 | | ATP-dependent protease subunit HslV | 0.35 | IAI47_03610 | | YqgE/AlgH family protein | low | > 76 |
| Vibrio cholerae E7946 ATCC 55056 | 0.66 | CSW01_13515 | | HslU--HslV peptidase proteolytic subunit | 0.41 | CSW01_02485 | | YqgE/AlgH family protein | low | > 62 |
| Enterobacter sp. TBS_079 | 0.66 | MPMX20_04537 | | ATP-dependent protease subunit HslV | 0.35 | MPMX20_03806 | | hypothetical protein | low | > 85 |
| Enterobacter asburiae PDN3 | 0.66 | EX28DRAFT_4405 | | ATP-dependent protease HslVU, peptidase subunit | 0.35 | EX28DRAFT_2986 | | Putative transcriptional regulator | low | > 76 |
| Shewanella oneidensis MR-1 | 0.65 | SO4162 | hslV | ATP-dependent protease HslV (NCBI ptt file) | 0.33 | SO3346 | | conserved hypothetical protein (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.65 | Shewana3_3699 | | ATP-dependent protease peptidase subunit (RefSeq) | 0.33 | Shewana3_1200 | | hypothetical protein (RefSeq) | low | > 73 |
| Pseudomonas simiae WCS417 | 0.65 | PS417_01920 | | ATP-dependent protease subunit HslV | 0.33 | PS417_26685 | | hypothetical protein | low | > 88 |
| Klebsiella michiganensis M5al | 0.65 | BWI76_RS00755 | | ATP-dependent protease subunit HslV | 0.36 | BWI76_RS24080 | | DUF179 domain-containing protein | low | > 92 |
| Pseudomonas fluorescens SBW25-INTG | 0.65 | PFLU_RS01965 | | ATP-dependent protease subunit HslV | 0.32 | PFLU_RS28330 | | YqgE/AlgH family protein | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.65 | PFLU_RS01965 | | ATP-dependent protease subunit HslV | 0.32 | PFLU_RS28330 | | YqgE/AlgH family protein | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.65 | AO353_12430 | | ATP-dependent protease subunit HslV | 0.34 | AO353_08120 | | hypothetical protein | — | — |
| Rhodanobacter denitrificans MT42 | 0.65 | LRK55_RS08290 | | ATP-dependent protease subunit HslV | 0.35 | LRK55_RS03980 | | YqgE/AlgH family protein | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.65 | LRK54_RS08525 | | ATP-dependent protease subunit HslV | 0.35 | LRK54_RS04210 | | YqgE/AlgH family protein | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.64 | Pf1N1B4_1552 | | ATP-dependent protease HslV (EC 3.4.25.-) | 0.34 | Pf1N1B4_2350 | | UPF0301 protein YqgE | — | — |
| Rhodanobacter sp. FW510-T8 | 0.64 | OKGIIK_15320 | hslV | ATP-dependent protease subunit HslV | 0.34 | OKGIIK_11085 | algH | YqgE/AlgH family protein | — | — |
| Alteromonas macleodii MIT1002 | 0.62 | MIT1002_03660 | | ATP-dependent protease subunit HslV | 0.37 | MIT1002_03056 | | hypothetical protein | low | > 70 |
| Pseudomonas sp. S08-1 | 0.61 | OH686_10095 | | ATP-dependent protease HslVU, peptidase subunit | 0.36 | OH686_10925 | | UPF0301 protein YqgE | low | > 80 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.61 | A4249_RS12390 | | ATP-dependent protease subunit HslV | 0.24 | A4249_RS00260 | | YqgE/AlgH family protein | low | > 48 |
| Pseudomonas putida KT2440 | 0.61 | PP_5000 | | peptidase component of the ATP-dependent HslVU protease | 0.32 | PP_4995 | | putative protein possibly involved in the control of exopolysaccharide production | low | > 96 |
| Sinorhizobium meliloti 1021 | 0.61 | SMc02575 | | ATP-dependent protease peptidase subunit | 0.33 | SMc00019 | | hypothetical protein | low | > 103 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.61 | Psyr_0395 | | HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B | 0.32 | Psyr_0485 | | Protein of unknown function DUF179 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.61 | Psyr_0395 | | HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B | 0.32 | Psyr_0485 | | Protein of unknown function DUF179 | low | > 86 |
| Rhodopseudomonas palustris CGA009 | 0.60 | TX73_001600 | | ATP-dependent protease subunit HslV | 0.31 | TX73_004710 | | YqgE/AlgH family protein | low | > 86 |
| Bosea sp. OAE506 | 0.60 | ABIE41_RS04430 | | ATP-dependent protease subunit HslV | 0.32 | ABIE41_RS23005 | | YqgE/AlgH family protein | low | > 77 |
| Rhodospirillum rubrum S1H | 0.60 | Rru_A3599 | | 20S proteasome, A and B subunits (NCBI) | 0.36 | Rru_A3059 | | Protein of unknown function DUF179 (NCBI) | low | > 58 |
| Pseudomonas stutzeri RCH2 | 0.59 | Psest_3936 | | ATP-dependent protease HslVU, peptidase subunit | 0.34 | Psest_0294 | | Putative transcriptional regulator | low | > 67 |
| Pseudomonas sp. RS175 | 0.59 | PFR28_04999 | | ATP-dependent protease subunit HslV | 0.33 | PFR28_04234 | | hypothetical protein | — | — |
| Azospirillum brasilense Sp245 | 0.59 | AZOBR_RS01655 | | peptidase | 0.33 | AZOBR_RS10525 | | hypothetical protein | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.58 | Pf6N2E2_3769 | | ATP-dependent protease HslV (EC 3.4.25.-) | 0.34 | Pf6N2E2_4609 | | UPF0301 protein YqgE | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.58 | PfGW456L13_289 | | ATP-dependent protease HslV (EC 3.4.25.-) | 0.34 | PfGW456L13_1019 | | UPF0301 protein YqgE | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.58 | AO356_09455 | | ATP-dependent protease subunit HslV | 0.34 | AO356_13465 | | hypothetical protein | low | > 104 |
| Magnetospirillum magneticum AMB-1 | 0.57 | AMB_RS22950 | | HslU--HslV peptidase proteolytic subunit | 0.32 | AMB_RS04505 | | YqgE/AlgH family protein | low | > 64 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.56 | GFF2314 | | ATP-dependent protease HslV (EC 3.4.25.-) | 0.36 | GFF3050 | | UPF0301 protein YqgE | low | > 78 |
| Caulobacter crescentus NA1000 Δfur | 0.56 | CCNA_03843 | | ATP-dependent endopeptidase hsl proteolytic subunit HslV | 0.29 | CCNA_03506 | | putative transcriptional regulator | low | > 67 |
| Caulobacter crescentus NA1000 | 0.56 | CCNA_03843 | | ATP-dependent endopeptidase hsl proteolytic subunit HslV | 0.29 | CCNA_03506 | | putative transcriptional regulator | low | > 66 |
| Lysobacter sp. OAE881 | 0.56 | ABIE51_RS03040 | | ATP-dependent protease subunit HslV | 0.33 | ABIE51_RS16025 | | YqgE/AlgH family protein | low | > 62 |
| Azospirillum sp. SherDot2 | 0.54 | MPMX19_02548 | | ATP-dependent protease subunit HslV | 0.32 | MPMX19_01077 | | hypothetical protein | low | > 112 |
| Dinoroseobacter shibae DFL-12 | 0.53 | Dshi_3440 | | 20S proteasome A and B subunits (RefSeq) | 0.35 | Dshi_3083 | | protein of unknown function DUF179 (RefSeq) | low | > 64 |
| Phaeobacter inhibens DSM 17395 | 0.52 | PGA1_c35260 | | ATP-dependent protease HslV | 0.33 | PGA1_c03130 | | Putative transcriptional regulator | low | > 62 |
Not shown: 7 genomes with orthologs for HSERO_RS00910 only; 2 genomes with orthologs for HSERO_RS02315 only