Conservation of cofitness between PS417_22855 and PS417_21565 in Pseudomonas simiae WCS417

78 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_22855 ssDNA exonuclease RecJ 1.0 PS417_21565 flagellar basal body rod protein FlgC 0.39 15
Pseudomonas fluorescens SBW25 0.98 PFLU_RS24515 single-stranded-DNA-specific exonuclease RecJ 1.00 PFLU_RS23175 flagellar basal body rod protein FlgC low > 109
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS24515 single-stranded-DNA-specific exonuclease RecJ 1.00 PFLU_RS23175 flagellar basal body rod protein FlgC low > 109
Pseudomonas fluorescens FW300-N2C3 0.95 AO356_06345 single-stranded-DNA-specific exonuclease RecJ 0.95 AO356_18920 flagellar basal-body rod protein FlgC low > 104
Pseudomonas fluorescens FW300-N1B4 0.95 Pf1N1B4_3020 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) 0.95 Pf1N1B4_3473 Flagellar basal-body rod protein FlgC low > 87
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_3137 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) 0.95 Pf6N2E2_5695 Flagellar basal-body rod protein FlgC low > 103
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_1730 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) 0.95 PfGW456L13_2002 Flagellar basal-body rod protein FlgC low > 87
Pseudomonas sp. RS175 0.94 PFR28_00339 Single-stranded-DNA-specific exonuclease RecJ 0.95 PFR28_03253 Flagellar basal-body rod protein FlgC low > 88
Pseudomonas fluorescens FW300-N2E3 0.93 AO353_04320 single-stranded-DNA-specific exonuclease RecJ 0.95 AO353_02855 flagellar basal-body rod protein FlgC low > 101
Pseudomonas putida KT2440 0.90 PP_1477 ssDNA-specific exonuclease RecJ 0.89 PP_4390 flagellar basal-body rod protein FlgC low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.88 Psyr_1298 exonuclease RecJ 0.84 Psyr_3480 Flagellar basal-body rod protein FlgC low > 86
Pseudomonas syringae pv. syringae B728a 0.88 Psyr_1298 exonuclease RecJ 0.84 Psyr_3480 Flagellar basal-body rod protein FlgC low > 86
Pseudomonas sp. S08-1 0.83 OH686_06955 single-stranded-DNA-specific exonuclease RecJ 0.84 OH686_02970 flagellar basal-body rod protein FlgC low > 80
Pseudomonas stutzeri RCH2 0.80 Psest_1544 single-stranded-DNA-specific exonuclease RecJ 0.77 Psest_2967 flagellar basal-body rod protein FlgC low > 67
Shewanella oneidensis MR-1 0.61 SO0952 recJ single-stranded-DNA-specific exonuclease RecJ (NCBI ptt file) 0.50 SO3249 flgC flagellar basal-body rod protein FlgC (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.60 Shewana3_3329 single-stranded-DNA-specific exonuclease RecJ (RefSeq) 0.50 Shewana3_1322 flgC flagellar basal body rod protein FlgC (RefSeq) low > 73
Shewanella loihica PV-4 0.59 Shew_0772 single-stranded-DNA-specific exonuclease RecJ (RefSeq) 0.52 Shew_1346 flgC flagellar basal body rod protein FlgC (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.59 CSW01_12240 single-stranded-DNA-specific exonuclease RecJ 0.47 CSW01_11220 flagellar basal body rod protein FlgC low > 62
Serratia liquefaciens MT49 0.59 IAI46_20720 single-stranded-DNA-specific exonuclease RecJ 0.42 IAI46_15955 flagellar basal body rod protein FlgC low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF2989 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) 0.42 GFF3355 Flagellar basal-body rod protein FlgC low > 78
Escherichia coli BW25113 0.58 b2892 recJ ssDNA exonuclease, 5' --> 3'-specific (NCBI) 0.43 b1074 flgC flagellar basal-body rod protein C (NCBI) low > 76
Escherichia coli ECRC99 0.58 KEDOAH_08560 recJ single-stranded-DNA-specific exonuclease RecJ 0.43 KEDOAH_24085 flgC flagellar basal body rod protein FlgC — —
Escherichia coli ECOR38 0.58 HEPCGN_18870 recJ single-stranded-DNA-specific exonuclease RecJ 0.43 HEPCGN_23820 flgC flagellar basal body rod protein FlgC 0.61 38
Escherichia coli ECRC101 0.58 MCAODC_10100 recJ single-stranded-DNA-specific exonuclease RecJ 0.43 MCAODC_23030 flgC flagellar basal body rod protein FlgC — —
Escherichia coli BL21 0.58 ECD_02724 ssDNA exonuclease, 5 0.43 ECD_01070 flagellar component of cell-proximal portion of basal-body rod — —
Escherichia coli ECRC98 0.58 JDDGAC_23220 recJ single-stranded-DNA-specific exonuclease RecJ 0.43 JDDGAC_07330 flgC flagellar basal body rod protein FlgC — —
Escherichia coli ECRC102 0.58 NIAGMN_17345 recJ single-stranded-DNA-specific exonuclease RecJ 0.43 NIAGMN_24160 flgC flagellar basal body rod protein FlgC — —
Escherichia coli ECRC62 0.58 BNILDI_10035 recJ single-stranded-DNA-specific exonuclease RecJ 0.43 BNILDI_19360 flgC flagellar basal body rod protein FlgC — —
Escherichia coli ECRC101 0.58 OKFHMN_19580 recJ single-stranded-DNA-specific exonuclease RecJ 0.43 OKFHMN_03670 flgC flagellar basal body rod protein FlgC — —
Escherichia coli ECOR27 0.58 NOLOHH_11505 recJ single-stranded-DNA-specific exonuclease RecJ 0.43 NOLOHH_21200 flgC flagellar basal body rod protein FlgC — —
Escherichia coli Nissle 1917 0.58 ECOLIN_RS16115 single-stranded-DNA-specific exonuclease RecJ 0.43 ECOLIN_RS06220 flagellar basal body rod protein FlgC low > 52
Escherichia fergusonii Becca 0.58 EFB2_01009 Single-stranded-DNA-specific exonuclease RecJ 0.43 EFB2_02900 Flagellar basal-body rod protein FlgC low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_00823 Single-stranded-DNA-specific exonuclease RecJ 0.43 OHPLBJKB_02591 Flagellar basal-body rod protein FlgC low > 73
Pantoea sp. MT58 0.57 IAI47_03830 single-stranded-DNA-specific exonuclease RecJ 0.41 IAI47_12160 flagellar basal body rod protein FlgC low > 76
Shewanella amazonensis SB2B 0.57 Sama_2737 single-stranded-DNA-specific exonuclease RecJ (RefSeq) 0.53 Sama_2317 flgC flagellar basal body rod protein FlgC (RefSeq) low > 62
Dickeya dadantii 3937 0.56 DDA3937_RS03310 single-stranded-DNA-specific exonuclease RecJ 0.43 DDA3937_RS13475 flagellar basal body rod protein FlgC low > 74
Dickeya dianthicola 67-19 0.56 HGI48_RS03450 single-stranded-DNA-specific exonuclease RecJ 0.43 HGI48_RS13520 flagellar basal body rod protein FlgC low > 71
Rahnella sp. WP5 0.56 EX31_RS13470 single-stranded-DNA-specific exonuclease RecJ 0.42 EX31_RS11310 flagellar basal body rod protein FlgC low > 89
Dickeya dianthicola ME23 0.56 DZA65_RS03495 single-stranded-DNA-specific exonuclease RecJ 0.43 DZA65_RS14005 flagellar basal body rod protein FlgC low > 75
Pectobacterium carotovorum WPP14 0.56 HER17_RS17880 single-stranded-DNA-specific exonuclease RecJ 0.41 HER17_RS08170 flagellar basal body rod protein FlgC low > 75
Enterobacter asburiae PDN3 0.56 EX28DRAFT_2943 single-stranded-DNA-specific exonuclease RecJ 0.42 EX28DRAFT_1858 flagellar basal-body rod protein FlgC low > 76
Enterobacter sp. TBS_079 0.56 MPMX20_03751 Single-stranded-DNA-specific exonuclease RecJ 0.42 MPMX20_01753 Flagellar basal-body rod protein FlgC low > 85
Erwinia tracheiphila SCR3 0.55 LU632_RS05985 recJ single-stranded-DNA-specific exonuclease RecJ 0.42 LU632_RS10400 flgC flagellar basal body rod protein FlgC low > 74
Marinobacter adhaerens HP15 0.53 HP15_766 bacterial RecJ exonuclease 0.63 HP15_1468 flagellar basal-body rod protein FlgC-like protein low > 73
Alteromonas macleodii MIT1002 0.52 MIT1002_00788 Single-stranded-DNA-specific exonuclease RecJ 0.52 MIT1002_01040 Putative proximal rod protein low > 70
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS06090 single-stranded DNA exonuclease 0.43 RR42_RS35720 flagellar basal body rod protein FlgC low > 128
Dechlorosoma suillum PS 0.48 Dsui_2860 single-stranded-DNA-specific exonuclease RecJ 0.43 Dsui_1733 flagellar basal-body rod protein FlgC — —
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_00488 exonuclease RecJ 0.39 H281DRAFT_05763 flagellar basal-body rod protein FlgC low > 103
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS05835 single-stranded-DNA-specific exonuclease RecJ 0.45 QEN71_RS28915 flagellar basal body rod protein FlgC low > 153
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS13965 single-stranded DNA exonuclease 0.48 HSERO_RS10185 flagellar basal body rod protein FlgC low > 78
Paraburkholderia graminis OAS925 0.47 ABIE53_002771 single-stranded-DNA-specific exonuclease 0.38 ABIE53_000101 flagellar basal-body rod protein FlgC 0.44 41
Ralstonia solanacearum PSI07 0.46 RPSI07_RS18620 single-stranded-DNA-specific exonuclease RecJ 0.40 RPSI07_RS01395 flagellar basal body rod protein FlgC low > 81
Ralstonia solanacearum GMI1000 0.46 RS_RS05550 single-stranded-DNA-specific exonuclease RecJ 0.40 RS_RS18800 flagellar basal body rod protein FlgC low > 80
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS12730 single-stranded DNA exonuclease 0.40 BPHYT_RS18890 flagellar basal body rod protein FlgC low > 109
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS02800 single-stranded-DNA-specific exonuclease RecJ 0.50 ABZR86_RS20080 flagellar basal body rod protein FlgC low > 74
Ralstonia solanacearum UW163 0.46 UW163_RS12210 single-stranded-DNA-specific exonuclease RecJ 0.41 UW163_RS17450 flagellar basal body rod protein FlgC — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS14740 single-stranded-DNA-specific exonuclease RecJ 0.41 RALBFv3_RS21735 flagellar basal body rod protein FlgC low > 76
Acidovorax sp. GW101-3H11 0.45 Ac3H11_1746 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) 0.42 Ac3H11_1376 Flagellar basal-body rod protein FlgC — —
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS00315 single-stranded-DNA-specific exonuclease RecJ 0.52 LRK54_RS13410 flagellar basal body rod protein FlgC low > 59
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS10395 single-stranded-DNA-specific exonuclease RecJ 0.40 ABZR87_RS22285 flagellar basal body rod protein FlgC low > 80
Variovorax sp. SCN45 0.45 GFF6700 Single-stranded-DNA-specific exonuclease RecJ 0.44 GFF5716 Flagellar basal-body rod protein FlgC low > 127
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_06995 recJ single-stranded-DNA-specific exonuclease RecJ 0.52 OKGIIK_02655 flgC flagellar basal body rod protein FlgC low > 52
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.2909.1 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) 0.36 Xcc-8004.2779.1 Flagellar basal-body rod protein FlgC low > 74
Castellaniella sp019104865 MT123 0.43 ABCV34_RS05005 single-stranded-DNA-specific exonuclease RecJ 0.42 ABCV34_RS05765 flagellar basal body rod protein FlgC low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF739 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) 0.43 GFF1414 Flagellar basal-body rod protein FlgC — —
Magnetospirillum magneticum AMB-1 0.25 AMB_RS18875 single-stranded-DNA-specific exonuclease RecJ 0.26 AMB_RS03170 flagellar basal body rod protein FlgC — —
Rhodospirillum rubrum S1H 0.24 Rru_A2408 RecJ exonuclease (NCBI) 0.27 Rru_A2825 Flagellar basal-body rod protein FlgC (NCBI) — —
Rhodopseudomonas palustris CGA009 0.24 TX73_012960 single-stranded-DNA-specific exonuclease RecJ 0.26 TX73_020155 flagellar basal body rod protein FlgC — —
Bosea sp. OAE506 0.24 ABIE41_RS19130 single-stranded-DNA-specific exonuclease RecJ 0.30 ABIE41_RS05520 flagellar basal body rod protein FlgC low > 77
Azospirillum sp. SherDot2 0.23 MPMX19_00667 Single-stranded-DNA-specific exonuclease RecJ 0.31 MPMX19_06194 Flagellar basal-body rod protein FlgC — —
Desulfovibrio vulgaris Miyazaki F 0.23 DvMF_1134 single-stranded-DNA-specific exonuclease RecJ (RefSeq) 0.29 DvMF_2285 flagellar basal-body rod protein FlgC (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.22 DVU0904 recJ single-stranded-DNA-specific exonuclease RecJ (TIGR) 0.32 DVU0315 flgC flagellar basal-body rod protein FlgC (TIGR) low > 55
Phaeobacter inhibens DSM 17395 0.22 PGA1_c08630 single-stranded-DNA-specific exonuclease RecJ 0.21 PGA1_c35820 flagellar basal-body rod protein FlgC — —
Sphingomonas koreensis DSMZ 15582 0.22 Ga0059261_3089 single-stranded-DNA-specific exonuclease RecJ 0.31 Ga0059261_2090 flagellar basal-body rod protein FlgC — —
Agrobacterium fabrum C58 0.21 Atu1586 single-stranded-DNA-specific exonuclease 0.25 Atu0554 flagellar basal-body rod protein — —
Dinoroseobacter shibae DFL-12 0.21 Dshi_2275 single-stranded-DNA-specific exonuclease RecJ (RefSeq) 0.23 Dshi_3248 flagellar basal-body rod protein FlgC (RefSeq) — —
Rhizobium sp. OAE497 0.21 ABIE40_RS08655 single-stranded-DNA-specific exonuclease RecJ 0.28 ABIE40_RS02975 flagellar basal body rod protein FlgC — —
Rhodanobacter denitrificans MT42 0.20 LRK55_RS18310 DHHA1 domain-containing protein 0.51 LRK55_RS13150 flagellar basal body rod protein FlgC low > 63
Sinorhizobium meliloti 1021 0.17 SMc00292 single-stranded-DNA-specific exonuclease 0.26 SMc03028 flagellar basal body rod protein FlgC — —

Not shown: 14 genomes with orthologs for PS417_22855 only; 5 genomes with orthologs for PS417_21565 only