| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas simiae WCS417 | 1.0 | PS417_21480 | | 23S rRNA pseudouridylate synthase | 1.0 | PS417_19725 | | flagellar biosynthesis protein FlhB | 0.37 | 10 |
| Pseudomonas fluorescens SBW25-INTG | 0.99 | PFLU_RS23095 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.95 | PFLU_RS21695 | | flagellar biosynthesis protein FlhB | 0.28 | 44 |
| Pseudomonas fluorescens SBW25 | 0.99 | PFLU_RS23095 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.95 | PFLU_RS21695 | | flagellar biosynthesis protein FlhB | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.94 | AO353_01405 | | 23S rRNA pseudouridylate synthase | 0.81 | AO353_18760 | | flagellar biosynthetic protein FlhB | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.93 | Pf1N1B4_459 | | Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) | 0.88 | Pf1N1B4_3621 | | Flagellar biosynthesis protein FlhB | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.93 | Pf6N2E2_5944 | | Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) | 0.82 | Pf6N2E2_2577 | | Flagellar biosynthesis protein FlhB | 0.40 | 31 |
| Pseudomonas fluorescens FW300-N2C3 | 0.93 | AO356_20125 | | 23S rRNA pseudouridylate synthase | 0.81 | AO356_03755 | | flagellar biosynthetic protein FlhB | low | > 104 |
| Pseudomonas sp. RS175 | 0.92 | PFR28_03018 | | Ribosomal large subunit pseudouridine synthase C | 0.80 | PFR28_00848 | | Flagellar biosynthetic protein FlhB | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.90 | PfGW456L13_2097 | | Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) | 0.86 | PfGW456L13_4336 | | Flagellar biosynthesis protein FlhB | low | > 87 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.89 | Psyr_1639 | | ribosomal large subunit pseudouridine synthase C | 0.73 | Psyr_3441 | | Flagellar biosynthetic protein FlhB | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.89 | Psyr_1639 | | ribosomal large subunit pseudouridine synthase C | 0.73 | Psyr_3441 | | Flagellar biosynthetic protein FlhB | low | > 86 |
| Pseudomonas putida KT2440 | 0.86 | PP_1906 | | ribosomal large subunit pseudouridine synthase C | 0.71 | PP_4352 | | flagellin export apparatus, substrate specificity protein | low | > 96 |
| Pseudomonas stutzeri RCH2 | 0.82 | Psest_1680 | | pseudouridine synthase, RluA family | 0.70 | Psest_1735 | | flagellar biosynthetic protein FlhB | — | — |
| Pseudomonas sp. S08-1 | 0.81 | OH686_22095 | | LSU rRNA pseudouridine(955/2504/2580) synthase | 0.73 | OH686_02755 | | flagellar biosynthetic protein FlhB | low | > 80 |
| Pantoea sp. MT58 | 0.56 | IAI47_12105 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.33 | IAI47_08345 | | flagellar type III secretion system protein FlhB | 0.53 | 21 |
| Pectobacterium carotovorum WPP14 | 0.55 | HER17_RS08615 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.36 | HER17_RS08135 | | flagellar type III secretion system protein FlhB | low | > 75 |
| Rahnella sp. WP5 | 0.55 | EX31_RS24400 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.29 | EX31_RS11345 | | flagellar type III secretion system protein FlhB | low | > 89 |
| Erwinia tracheiphila SCR3 | 0.54 | LU632_RS14855 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.30 | LU632_RS13510 | flhB | flagellar type III secretion system protein FlhB | low | > 74 |
| Escherichia coli Nissle 1917 | 0.54 | ECOLIN_RS06280 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.34 | ECOLIN_RS10740 | | flagellar biosynthesis protein FlhB | low | > 52 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.54 | OHPLBJKB_02580 | | Ribosomal large subunit pseudouridine synthase C | 0.34 | OHPLBJKB_01848 | | Flagellar biosynthetic protein FlhB | low | > 73 |
| Escherichia fergusonii Becca | 0.54 | EFB2_02889 | | Ribosomal large subunit pseudouridine synthase C | 0.34 | EFB2_02063 | | Flagellar biosynthetic protein FlhB | low | > 86 |
| Escherichia coli ECOR38 | 0.54 | HEPCGN_23865 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.34 | HEPCGN_04585 | flhB | flagellar biosynthesis protein FlhB | low | > 85 |
| Escherichia coli ECOR27 | 0.54 | NOLOHH_21145 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.34 | NOLOHH_16605 | flhB | flagellar biosynthesis protein FlhB | — | — |
| Escherichia coli BW25113 | 0.54 | b1086 | rluC | 23S rRNA pseudouridylate synthase (NCBI) | 0.34 | b1880 | flhB | flagellar biosynthesis protein B (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.54 | ECD_01082 | | 23S rRNA pseudouridine(955,2504,2580) synthase | 0.34 | ECD_01851 | | flagellin export apparatus, substrate specificity protein | low | > 60 |
| Escherichia coli ECRC62 | 0.54 | BNILDI_19305 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.34 | BNILDI_15395 | flhB | flagellar biosynthesis protein FlhB | — | — |
| Escherichia coli ECRC101 | 0.54 | MCAODC_22975 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.34 | MCAODC_19240 | flhB | flagellar biosynthesis protein FlhB | — | — |
| Escherichia coli ECRC99 | 0.54 | KEDOAH_24140 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.34 | KEDOAH_01940 | flhB | flagellar biosynthesis protein FlhB | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.54 | GFF3366 | | Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) | 0.37 | GFF1661 | | Flagellar biosynthesis protein FlhB | low | > 78 |
| Escherichia coli ECRC102 | 0.54 | NIAGMN_24215 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.34 | NIAGMN_01895 | flhB | flagellar biosynthesis protein FlhB | — | — |
| Escherichia coli ECRC98 | 0.54 | JDDGAC_07275 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.34 | JDDGAC_00740 | flhB | flagellar biosynthesis protein FlhB | — | — |
| Enterobacter asburiae PDN3 | 0.54 | EX28DRAFT_1844 | | pseudouridine synthase, RluA family | 0.37 | EX28DRAFT_0680 | | flagellar biosynthetic protein FlhB | low | > 76 |
| Escherichia coli ECRC101 | 0.54 | OKFHMN_03615 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.34 | OKFHMN_26165 | flhB | flagellar biosynthesis protein FlhB | — | — |
| Enterobacter sp. TBS_079 | 0.54 | MPMX20_01766 | | Ribosomal large subunit pseudouridine synthase C | 0.37 | MPMX20_02784 | | Flagellar biosynthetic protein FlhB | low | > 85 |
| Alteromonas macleodii MIT1002 | 0.54 | MIT1002_01725 | | Ribosomal large subunit pseudouridine synthase C | 0.43 | MIT1002_01098 | | Flagellar biosynthetic protein FlhB | low | > 70 |
| Shewanella amazonensis SB2B | 0.53 | Sama_1988 | | pseudouridylate synthase (RefSeq) | 0.43 | Sama_2284 | flhB | flagellar biosynthesis protein FlhB (RefSeq) | low | > 62 |
| Dickeya dadantii 3937 | 0.53 | DDA3937_RS13155 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.40 | DDA3937_RS13510 | | flagellar type III secretion system protein FlhB | low | > 74 |
| Serratia liquefaciens MT49 | 0.53 | IAI46_09755 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.35 | IAI46_16000 | | flagellar type III secretion system protein FlhB | low | > 86 |
| Dickeya dianthicola ME23 | 0.53 | DZA65_RS13690 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.40 | DZA65_RS14040 | | flagellar type III secretion system protein FlhB | low | > 75 |
| Dickeya dianthicola 67-19 | 0.53 | HGI48_RS13220 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.40 | HGI48_RS13555 | | flagellar type III secretion system protein FlhB | low | > 71 |
| Shewanella loihica PV-4 | 0.52 | Shew_1594 | | RluA family pseudouridine synthase (RefSeq) | 0.46 | Shew_1379 | flhB | flagellar biosynthesis protein FlhB (RefSeq) | low | > 60 |
| Shewanella sp. ANA-3 | 0.52 | Shewana3_2566 | | ribosomal large subunit pseudouridine synthase C (RefSeq) | 0.44 | Shewana3_1355 | flhB | flagellar biosynthesis protein FlhB (RefSeq) | low | > 73 |
| Marinobacter adhaerens HP15 | 0.49 | HP15_2221 | | pseudouridine synthase, RluA family | 0.46 | HP15_2309 | | flagellar biosynthesis protein FlhB | low | > 73 |
| Vibrio cholerae E7946 ATCC 55056 | 0.47 | CSW01_10130 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.43 | CSW01_10580 | | flagellar biosynthesis protein FlhB | low | > 62 |
| Herbaspirillum seropedicae SmR1 | 0.47 | HSERO_RS09415 | | ribosomal large subunit pseudouridine synthase C | 0.37 | HSERO_RS10140 | | flagellar biosynthesis protein FlhB | low | > 78 |
| Paraburkholderia graminis OAS925 | 0.45 | ABIE53_003058 | | 23S rRNA pseudouridine955/2504/2580 synthase | 0.36 | ABIE53_000114 | | flagellar biosynthetic protein FlhB | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.45 | QEN71_RS04500 | | RluA family pseudouridine synthase | 0.36 | QEN71_RS28960 | | flagellar biosynthesis protein FlhB | 0.79 | 103 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.44 | H281DRAFT_04340 | | 23S rRNA pseudouridine955/2504/2580 synthase | 0.36 | H281DRAFT_05752 | | flagellar biosynthetic protein FlhB | low | > 103 |
| Dechlorosoma suillum PS | 0.44 | Dsui_2437 | | pseudouridine synthase, RluA family | 0.38 | Dsui_1722 | | flagellar biosynthetic protein FlhB | low | > 51 |
| Burkholderia phytofirmans PsJN | 0.43 | BPHYT_RS14480 | | ribosomal large subunit pseudouridine synthase C | 0.38 | BPHYT_RS18945 | | flagellar biosynthesis protein FlhB | low | > 109 |
| Lysobacter sp. OAE881 | 0.43 | ABIE51_RS11800 | | RluA family pseudouridine synthase | 0.36 | ABIE51_RS16845 | | flagellar biosynthesis protein FlhB | low | > 62 |
| Ralstonia solanacearum GMI1000 | 0.42 | RS_RS05155 | | RluA family pseudouridine synthase | 0.35 | RS_RS23850 | | flagellar type III secretion system protein FlhB | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.42 | RR42_RS14155 | | pseudouridine synthase | 0.39 | RR42_RS35770 | | flagellar biosynthesis protein FlhB | low | > 128 |
| Ralstonia sp. UNC404CL21Col | 0.42 | ABZR87_RS10090 | | RluA family pseudouridine synthase | 0.35 | ABZR87_RS18015 | | flagellar biosynthesis protein FlhB | low | > 80 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.42 | Xcc-8004.2616.1 | | Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) | 0.35 | Xcc-8004.2827.1 | | Flagellar biosynthesis protein FlhB | low | > 74 |
| Ralstonia solanacearum PSI07 | 0.42 | RPSI07_RS19085 | | RluA family pseudouridine synthase | 0.34 | RPSI07_RS06185 | | flagellar type III secretion system protein FlhB | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.42 | RALBFv3_RS14375 | | RluA family pseudouridine synthase | 0.33 | RALBFv3_RS17465 | | flagellar type III secretion system protein FlhB | low | > 76 |
| Ralstonia solanacearum UW163 | 0.42 | UW163_RS11840 | | RluA family pseudouridine synthase | 0.33 | UW163_RS21685 | | flagellar type III secretion system protein FlhB | — | — |
| Rhodanobacter denitrificans MT42 | 0.42 | LRK55_RS17750 | | RluA family pseudouridine synthase | 0.35 | LRK55_RS13300 | | flagellar biosynthesis protein FlhB | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.42 | LRK54_RS17895 | | RluA family pseudouridine synthase | 0.35 | LRK54_RS13560 | | flagellar biosynthesis protein FlhB | low | > 59 |
| Rhodanobacter sp. FW510-T8 | 0.41 | OKGIIK_07405 | rluA | 23S rRNA pseudouridine(955/2504/2580) synthase | 0.33 | OKGIIK_02810 | flhB | flagellar biosynthesis protein FlhB | low | > 52 |
| Acidovorax sp. GW101-3H11 | 0.40 | Ac3H11_1590 | | Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) | 0.31 | Ac3H11_1385 | | Flagellar biosynthesis protein FlhB | low | > 79 |
| Variovorax sp. SCN45 | 0.40 | GFF3847 | | LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) | 0.37 | GFF5770 | | Flagellar biosynthesis protein FlhB | low | > 127 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.40 | GFF121 | | Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) | 0.29 | GFF1432 | | Flagellar biosynthesis protein FlhB | low | > 90 |
| Dyella japonica UNC79MFTsu3.2 | 0.39 | ABZR86_RS02725 | | RluA family pseudouridine synthase | 0.35 | ABZR86_RS20245 | | flagellar biosynthesis protein FlhB | low | > 74 |
| Castellaniella sp019104865 MT123 | 0.39 | ABCV34_RS08415 | | RluA family pseudouridine synthase | 0.42 | ABCV34_RS05800 | | flagellar biosynthesis protein FlhB | low | > 48 |
| Agrobacterium fabrum C58 | 0.29 | Atu1471 | | ribosomal large subunit pseudouridine synthase C | 0.26 | Atu0564 | | flagellar biosynthetic protein | — | — |
| Rhizobium sp. OAE497 | 0.28 | ABIE40_RS09915 | | RluA family pseudouridine synthase | 0.25 | ABIE40_RS02930 | | flagellar biosynthesis protein FlhB | low | > 107 |
| Rhodospirillum rubrum S1H | 0.27 | Rru_A2659 | | Pseudouridine synthase, RluD (NCBI) | 0.26 | Rru_A2821 | | Flagellar biosynthetic protein FlhB (NCBI) | — | — |
| Sinorhizobium meliloti 1021 | 0.26 | SMc01275 | | ribosomal large subunit pseudouridine synthase C protein | 0.24 | SMc03018 | | flagellar biosynthesis protein FlhB | low | > 103 |
| Magnetospirillum magneticum AMB-1 | 0.24 | AMB_RS15620 | | RluA family pseudouridine synthase | 0.28 | AMB_RS03190 | | flagellar biosynthesis protein FlhB | low | > 64 |
| Phaeobacter inhibens DSM 17395 | 0.24 | PGA1_c01950 | | ribosomal large subunit pseudouridine synthase C | 0.21 | PGA1_c35730 | | flagellar biosynthetic protein FlhB | — | — |
| Azospirillum sp. SherDot2 | 0.24 | MPMX19_01718 | | Ribosomal large subunit pseudouridine synthase C | 0.28 | MPMX19_00867 | | Flagellar biosynthetic protein FlhB | low | > 112 |
| Sphingomonas koreensis DSMZ 15582 | 0.23 | Ga0059261_1033 | | pseudouridine synthase, RluA family | 0.28 | Ga0059261_1103 | | flagellar biosynthetic protein FlhB | — | — |
| Dinoroseobacter shibae DFL-12 | 0.23 | Dshi_0315 | | pseudouridine synthase, RluA family (RefSeq) | 0.20 | Dshi_3256 | | type III secretion exporter (RefSeq) | low | > 64 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.23 | A4249_RS07865 | | RluA family pseudouridine synthase | 0.27 | A4249_RS15235 | | flagellar biosynthesis protein FlhB | low | > 48 |
| Azospirillum brasilense Sp245 | 0.22 | AZOBR_RS06905 | | pseudouridine synthase | 0.30 | AZOBR_RS11110 | | flagellar biosynthesis protein | low | > 97 |
| Caulobacter crescentus NA1000 | 0.22 | CCNA_02059 | | ribosomal large subunit pseudouridine synthase C | 0.22 | CCNA_01131 | | flagellar biosynthesis protein FlhB | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.22 | CCNA_02059 | | ribosomal large subunit pseudouridine synthase C | 0.22 | CCNA_01131 | | flagellar biosynthesis protein FlhB | low | > 67 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.20 | DVU3191 | rluC | ribosomal large subunit pseudouridine synthase C (TIGR) | 0.25 | DVU3233 | flhB | flagellar biosynthetic protein FlhB (TIGR) | low | > 55 |
Not shown: 5 genomes with orthologs for PS417_21480 only; 4 genomes with orthologs for PS417_19725 only