Conservation of cofitness between PS417_00245 and PS417_19710 in Pseudomonas simiae WCS417

78 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_00245 oligopeptidase A 1.0 PS417_19710 flagellar biosynthesis protein FlhA 0.50 6
Pseudomonas fluorescens SBW25 0.99 PFLU_RS00240 oligopeptidase A 0.99 PFLU_RS21675 flagellar biosynthesis protein FlhA low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS00240 oligopeptidase A 0.99 PFLU_RS21675 flagellar biosynthesis protein FlhA low > 109
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_1844 Oligopeptidase A (EC 3.4.24.70) 0.90 Pf1N1B4_3622 Flagellar biosynthesis protein FlhA low > 87
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_624 Oligopeptidase A (EC 3.4.24.70) 0.90 PfGW456L13_4334 Flagellar biosynthesis protein FlhA low > 87
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_4091 Oligopeptidase A (EC 3.4.24.70) 0.91 Pf6N2E2_2576 Flagellar biosynthesis protein FlhA low > 103
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_11120 oligopeptidase A 0.91 AO356_03745 flagellar biosynthesis protein FlhA 0.22 88
Pseudomonas fluorescens FW300-N2E3 0.93 AO353_10775 oligopeptidase A 0.90 AO353_18770 flagellar biosynthesis protein FlhA low > 101
Pseudomonas sp. RS175 0.92 PFR28_04699 Oligopeptidase A 0.92 PFR28_00849 Flagellar biosynthesis protein FlhA low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.87 Psyr_3440 Flagellar biosynthesis protein FlhA low > 86
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.87 Psyr_3440 Flagellar biosynthesis protein FlhA low > 86
Pseudomonas putida KT2440 0.90 PP_0096 oligopeptidase A 0.86 PP_4344 flagellar export pore protein low > 96
Pseudomonas sp. S08-1 0.83 OH686_12360 Oligopeptidase A 0.79 OH686_02745 flagellar biosynthesis protein FlhA low > 80
Pseudomonas stutzeri RCH2 0.80 Psest_4320 Zn-dependent oligopeptidases 0.78 Psest_1737 flagellar biosynthesis protein FlhA low > 67
Shewanella sp. ANA-3 0.59 Shewana3_4051 oligopeptidase A (RefSeq) 0.62 Shewana3_1356 flhA flagellar biosynthesis protein FlhA (RefSeq) low > 73
Shewanella oneidensis MR-1 0.59 SO4699 prlC oligopeptidase A (NCBI ptt file) 0.60 SO3213 flhA flagellar biosynthesis protein FlhA (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.58 Shew_3657 oligopeptidase A (RefSeq) 0.60 Shew_1380 flhA flagellar biosynthesis protein FlhA (RefSeq) 0.51 32
Shewanella amazonensis SB2B 0.58 Sama_3546 oligopeptidase A (RefSeq) 0.61 Sama_2283 flhA flagellar biosynthesis protein FlhA (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.58 MIT1002_03633 Oligopeptidase A 0.60 MIT1002_01100 Flagellar biosynthesis protein FlhA low > 70
Dickeya dadantii 3937 0.58 DDA3937_RS21265 oligopeptidase A 0.50 DDA3937_RS13505 flagellar biosynthesis protein FlhA low > 74
Dickeya dianthicola 67-19 0.57 HGI48_RS00045 oligopeptidase A 0.51 HGI48_RS13550 flagellar biosynthesis protein FlhA low > 71
Dickeya dianthicola ME23 0.57 DZA65_RS00035 oligopeptidase A 0.51 DZA65_RS14035 flagellar biosynthesis protein FlhA low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF517 Oligopeptidase A (EC 3.4.24.70) 0.48 GFF1660 Flagellar biosynthesis protein FlhA low > 78
Enterobacter asburiae PDN3 0.57 EX28DRAFT_4063 Zn-dependent oligopeptidases 0.47 EX28DRAFT_0681 flagellar biosynthesis protein FlhA low > 76
Escherichia coli ECOR38 0.57 HEPCGN_15325 prlC oligopeptidase A 0.48 HEPCGN_04590 flhA flagellar biosynthesis protein FlhA low > 85
Enterobacter sp. TBS_079 0.57 MPMX20_04397 Oligopeptidase A 0.47 MPMX20_02783 Flagellar biosynthesis protein FlhA low > 85
Escherichia coli ECRC62 0.57 BNILDI_03210 prlC oligopeptidase A 0.48 BNILDI_15400 flhA flagellar biosynthesis protein FlhA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_00205 Oligopeptidase A 0.48 OHPLBJKB_01849 Flagellar biosynthesis protein FlhA low > 73
Escherichia coli BW25113 0.57 b3498 prlC oligopeptidase A (NCBI) 0.49 b1879 flhA flagellar biosynthesis protein A (NCBI) low > 76
Escherichia coli ECOR27 0.57 NOLOHH_08350 prlC oligopeptidase A 0.48 NOLOHH_16610 flhA flagellar biosynthesis protein FlhA low > 57
Escherichia coli BL21 0.57 ECD_03347 oligopeptidase A 0.48 ECD_01850 putative flagellar export pore protein low > 60
Escherichia coli ECRC101 0.57 OKFHMN_16415 prlC oligopeptidase A 0.48 OKFHMN_26170 flhA flagellar biosynthesis protein FlhA — —
Escherichia coli ECRC102 0.57 NIAGMN_14180 prlC oligopeptidase A 0.48 NIAGMN_01890 flhA flagellar biosynthesis protein FlhA — —
Escherichia coli ECRC99 0.57 KEDOAH_11730 prlC oligopeptidase A 0.48 KEDOAH_01935 flhA flagellar biosynthesis protein FlhA — —
Escherichia coli ECRC98 0.57 JDDGAC_20045 prlC oligopeptidase A 0.48 JDDGAC_00745 flhA flagellar biosynthesis protein FlhA — —
Escherichia fergusonii Becca 0.57 EFB2_00317 Oligopeptidase A 0.48 EFB2_02064 Flagellar biosynthesis protein FlhA low > 86
Escherichia coli ECRC101 0.57 MCAODC_06930 prlC oligopeptidase A 0.48 MCAODC_19235 flhA flagellar biosynthesis protein FlhA — —
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_01010 oligopeptidase A 0.60 CSW01_10350 flagellar biosynthesis protein FlhA low > 62
Escherichia coli Nissle 1917 0.57 ECOLIN_RS19985 oligopeptidase A 0.48 ECOLIN_RS10735 flagellar biosynthesis protein FlhA — —
Pantoea sp. MT58 0.56 IAI47_01345 oligopeptidase A 0.49 IAI47_08350 flagellar biosynthesis protein FlhA low > 76
Erwinia tracheiphila SCR3 0.56 LU632_RS19470 prlC oligopeptidase A 0.49 LU632_RS13505 flhA flagellar biosynthesis protein FlhA low > 74
Marinobacter adhaerens HP15 0.56 HP15_3759 oligopeptidase A-like protein 0.65 HP15_2305 flagellar biosynthesis protein A low > 73
Serratia liquefaciens MT49 0.56 IAI46_24210 oligopeptidase A 0.49 IAI46_15995 flagellar biosynthesis protein FlhA low > 86
Pectobacterium carotovorum WPP14 0.56 HER17_RS21300 oligopeptidase A 0.50 HER17_RS08140 flagellar biosynthesis protein FlhA low > 75
Rahnella sp. WP5 0.56 EX31_RS05165 oligopeptidase A 0.49 EX31_RS11340 flagellar biosynthesis protein FlhA low > 89
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS07290 oligopeptidase A 0.52 HSERO_RS10145 flagellar biosynthesis protein FlhA low > 78
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS14940 M3 family metallopeptidase 0.60 ABZR86_RS20250 flagellar biosynthesis protein FlhA low > 74
Dechlorosoma suillum PS 0.48 Dsui_0046 Zn-dependent oligopeptidase 0.54 Dsui_1723 flagellar biosynthesis protein FlhA low > 51
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_15380 dcp oligopeptidase A 0.57 OKGIIK_02815 flhA flagellar biosynthesis protein FlhA low > 52
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.4539.1 Oligopeptidase A (EC 3.4.24.70) 0.56 Xcc-8004.2828.1 Flagellar biosynthesis protein FlhA low > 74
Rhodanobacter denitrificans MT42 0.47 LRK55_RS08380 M3 family metallopeptidase 0.57 LRK55_RS13305 flagellar biosynthesis protein FlhA low > 63
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS08615 M3 family metallopeptidase 0.56 LRK54_RS13565 flagellar biosynthesis protein FlhA low > 59
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS07340 oligopeptidase A 0.52 RR42_RS35765 flagellar biosynthesis protein FlhA low > 128
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS05695 M3 family metallopeptidase 0.52 QEN71_RS28955 flagellar biosynthesis protein FlhA 0.93 27
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS01690 oligopeptidase A 0.51 RALBFv3_RS17470 flagellar biosynthesis protein FlhA low > 76
Ralstonia solanacearum UW163 0.45 UW163_RS15000 oligopeptidase A 0.51 UW163_RS21680 flagellar biosynthesis protein FlhA — —
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS13490 M3 family metallopeptidase 0.52 ABZR87_RS18025 flagellar biosynthesis protein FlhA low > 80
Ralstonia solanacearum GMI1000 0.45 RS_RS08035 oligopeptidase A 0.51 RS_RS23845 flagellar biosynthesis protein FlhA low > 80
Paraburkholderia graminis OAS925 0.45 ABIE53_002798 oligopeptidase A 0.50 ABIE53_000113 flagellar biosynthesis protein FlhA low > 113
Variovorax sp. SCN45 0.45 GFF963 Oligopeptidase A (EC 3.4.24.70) 0.50 GFF5771 Flagellar biosynthesis protein FlhA low > 127
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS12875 oligopeptidase A 0.50 BPHYT_RS18940 flagellar biosynthesis protein FlhA low > 109
Ralstonia solanacearum PSI07 0.44 RPSI07_RS15795 oligopeptidase A 0.51 RPSI07_RS06180 flagellar biosynthesis protein FlhA low > 81
Acidovorax sp. GW101-3H11 0.44 Ac3H11_4097 Oligopeptidase A (EC 3.4.24.70) 0.48 Ac3H11_1384 Flagellar biosynthesis protein FlhA low > 79
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_00461 oligopeptidase A Metallo peptidase. MEROPS family M03A 0.50 H281DRAFT_05753 flagellar biosynthesis protein FlhA low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF4214 Oligopeptidase A (EC 3.4.24.70) 0.48 GFF1431 Flagellar biosynthesis protein FlhA low > 90
Castellaniella sp019104865 MT123 0.41 ABCV34_RS04180 M3 family metallopeptidase 0.48 ABCV34_RS05795 flagellar biosynthesis protein FlhA — —
Sinorhizobium meliloti 1021 0.28 SMc04403 peptidyl-dipeptidase A protein 0.29 SMc03054 flagellar biosynthesis protein FlhA low > 103
Agrobacterium fabrum C58 0.28 Atu2664 peptidyl-dipeptidase 0.29 Atu0581 flagellar biosynthesis protein 0.26 26
Rhizobium sp. OAE497 0.27 ABIE40_RS18135 M3 family metallopeptidase 0.31 ABIE40_RS03110 flagellar biosynthesis protein FlhA low > 107
Rhodopseudomonas palustris CGA009 0.27 TX73_004495 M3 family metallopeptidase 0.36 TX73_008415 flagellar biosynthesis protein FlhA low > 86
Azospirillum brasilense Sp245 0.26 AZOBR_RS23485 peptidase M3 0.34 AZOBR_RS29955 flagellar biosynthesis protein FlhA low > 97
Phaeobacter inhibens DSM 17395 0.25 PGA1_c26590 peptidyl-dipeptidase Dcp 0.26 PGA1_c35710 flagellar biosynthetic protein FlhA low > 62
Bosea sp. OAE506 0.25 ABIE41_RS12985 M3 family metallopeptidase 0.36 ABIE41_RS10915 flagellar biosynthesis protein FlhA low > 77
Dinoroseobacter shibae DFL-12 0.23 Dshi_2973 Peptidyl-dipeptidase Dcp (RefSeq) 0.28 Dshi_3258 flagellar biosynthesis protein FlhA (RefSeq) low > 64
Sphingomonas koreensis DSMZ 15582 0.23 Ga0059261_2479 Zn-dependent oligopeptidases 0.42 Ga0059261_2082 flagellar biosynthesis protein FlhA low > 68
Caulobacter crescentus NA1000 0.23 CCNA_03816 peptidyl-dipeptidase DCP 0.32 CCNA_00956 flagellar biosynthesis protein FlhA low > 66
Caulobacter crescentus NA1000 Δfur 0.23 CCNA_03816 peptidyl-dipeptidase DCP 0.32 CCNA_00956 flagellar biosynthesis protein FlhA low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.22 A4249_RS12525 M3 family metallopeptidase 0.35 A4249_RS09755 flagellar biosynthesis protein FlhA low > 48
Lysobacter sp. OAE881 0.21 ABIE51_RS09155 M3 family metallopeptidase 0.53 ABIE51_RS16850 flagellar biosynthesis protein FlhA low > 62

Not shown: 13 genomes with orthologs for PS417_00245 only; 5 genomes with orthologs for PS417_19710 only