Conservation of cofitness between PS417_26685 and PS417_19690 in Pseudomonas simiae WCS417

80 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_26685 hypothetical protein 1.0 PS417_19690 histidine kinase 0.27 13
Pseudomonas fluorescens SBW25 0.98 PFLU_RS28330 YqgE/AlgH family protein 0.97 PFLU_RS21655 response regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS28330 YqgE/AlgH family protein 0.97 PFLU_RS21655 response regulator low > 109
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_4609 UPF0301 protein YqgE 0.90 Pf6N2E2_2572 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY low > 103
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_13465 hypothetical protein 0.90 AO356_03725 histidine kinase low > 104
Pseudomonas sp. RS175 0.89 PFR28_04234 hypothetical protein 0.92 PFR28_00853 Chemotaxis protein CheY low > 88
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_2350 UPF0301 protein YqgE 0.94 Pf1N1B4_3627 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY low > 87
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_1019 UPF0301 protein YqgE 0.94 PfGW456L13_4330 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY low > 87
Pseudomonas fluorescens FW300-N2E3 0.83 AO353_08120 hypothetical protein 0.95 AO353_18790 histidine kinase low > 101
Pseudomonas putida KT2440 0.76 PP_4995 putative protein possibly involved in the control of exopolysaccharide production 0.81 PP_4340 response regulator for chemotactic signal transduction low > 96
Pseudomonas syringae pv. syringae B728a 0.75 Psyr_0485 Protein of unknown function DUF179 0.87 Psyr_3436 Response regulator receiver low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.75 Psyr_0485 Protein of unknown function DUF179 0.87 Psyr_3436 Response regulator receiver 0.58 9
Pseudomonas sp. S08-1 0.73 OH686_10925 UPF0301 protein YqgE 0.88 OH686_02725 Chemotaxis regulator - transmits chemoreceptor signals to flagellar motor components CheY low > 80
Pseudomonas stutzeri RCH2 0.68 Psest_0294 Putative transcriptional regulator 0.84 Psest_1741 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains low > 67
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS04220 hypothetical protein 0.62 BPHYT_RS18965 chemotaxis protein CheY low > 109
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_04814 putative transcriptional regulator 0.61 H281DRAFT_05748 response regulator receiver protein low > 103
Marinobacter adhaerens HP15 0.47 HP15_3510 transcriptional regulator 0.84 HP15_2301 response regulator receiver domain protein (CheY-) low > 73
Paraburkholderia graminis OAS925 0.46 ABIE53_001128 putative transcriptional regulator 0.61 ABIE53_000118 two-component system chemotaxis response regulator CheY low > 113
Ralstonia solanacearum UW163 0.46 UW163_RS00955 DUF179 domain-containing protein 0.59 UW163_RS21730 chemotaxis protein CheY — —
Ralstonia solanacearum GMI1000 0.46 RS_RS03395 YqgE/AlgH family protein 0.59 RS_RS23890 chemotaxis protein CheY — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS12610 DUF179 domain-containing protein 0.59 RALBFv3_RS17420 chemotaxis protein CheY low > 76
Ralstonia solanacearum PSI07 0.46 RPSI07_RS20650 YqgE/AlgH family protein 0.58 RPSI07_RS06225 chemotaxis protein CheY low > 81
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS15875 hypothetical protein 0.65 RR42_RS35780 chemotaxis protein CheY low > 128
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS25795 YqgE/AlgH family protein 0.63 QEN71_RS28980 chemotaxis response regulator CheY low > 153
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS08610 YqgE/AlgH family protein 0.59 ABZR87_RS17995 chemotaxis response regulator CheY low > 80
Castellaniella sp019104865 MT123 0.44 ABCV34_RS10730 YqgE/AlgH family protein 0.63 ABCV34_RS05810 chemotaxis response regulator CheY low > 48
Lysobacter sp. OAE881 0.43 ABIE51_RS16025 YqgE/AlgH family protein 0.74 ABIE51_RS16870 chemotaxis response regulator CheY low > 62
Alteromonas macleodii MIT1002 0.43 MIT1002_03056 hypothetical protein 0.78 MIT1002_01104 Chemotaxis protein CheY low > 70
Dechlorosoma suillum PS 0.43 Dsui_0593 putative transcriptional regulator 0.65 Dsui_1719 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains low > 51
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.1720.1 UPF0301 protein YqgE 0.77 Xcc-8004.2833.1 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY low > 74
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS10380 YqgE/AlgH family protein 0.73 ABZR86_RS20270 chemotaxis response regulator CheY — —
Magnetospirillum magneticum AMB-1 0.42 AMB_RS04505 YqgE/AlgH family protein 0.54 AMB_RS17710 response regulator low > 64
Azospirillum brasilense Sp245 0.41 AZOBR_RS10525 hypothetical protein 0.53 AZOBR_RS12415 chemotaxis protein CheY low > 97
Pectobacterium carotovorum WPP14 0.41 HER17_RS02630 YqgE/AlgH family protein 0.66 HER17_RS08125 chemotaxis response regulator CheY low > 75
Agrobacterium fabrum C58 0.41 Atu0781 hypothetical protein 0.35 Atu0516 chemotaxis receiver protein low > 89
Rhodanobacter denitrificans MT42 0.41 LRK55_RS03980 YqgE/AlgH family protein 0.73 LRK55_RS13325 chemotaxis response regulator CheY — —
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS04210 YqgE/AlgH family protein 0.73 LRK54_RS13585 chemotaxis response regulator CheY low > 59
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS02315 transcriptional regulator 0.63 HSERO_RS10130 chemotaxis protein CheY — —
Azospirillum sp. SherDot2 0.40 MPMX19_01077 hypothetical protein 0.53 MPMX19_01605 Chemotaxis protein CheY low > 112
Variovorax sp. SCN45 0.40 GFF2157 UPF0301 protein YqgE 0.63 GFF5768 Chemotaxis regulator - transmits chemoreceptor signals to flagellar motor components CheY — —
Vibrio cholerae E7946 ATCC 55056 0.40 CSW01_02485 YqgE/AlgH family protein 0.80 CSW01_10330 chemotaxis protein CheY low > 62
Dickeya dadantii 3937 0.40 DDA3937_RS18565 YqgE/AlgH family protein 0.66 DDA3937_RS13520 chemotaxis response regulator CheY low > 74
Serratia liquefaciens MT49 0.40 IAI46_21395 YqgE/AlgH family protein 0.65 IAI46_16010 chemotaxis response regulator CheY low > 86
Rhodopseudomonas palustris CGA009 0.40 TX73_004710 YqgE/AlgH family protein 0.52 TX73_006030 response regulator low > 86
Shewanella sp. ANA-3 0.40 Shewana3_1200 hypothetical protein (RefSeq) 0.81 Shewana3_1360 response regulator receiver protein (RefSeq) — —
Dickeya dianthicola ME23 0.40 DZA65_RS19635 YqgE/AlgH family protein 0.65 DZA65_RS14050 chemotaxis protein CheY low > 75
Dickeya dianthicola 67-19 0.39 HGI48_RS18500 YqgE/AlgH family protein 0.66 HGI48_RS13565 chemotaxis response regulator CheY low > 71
Acidovorax sp. GW101-3H11 0.39 Ac3H11_3981 UPF0301 protein YqgE 0.51 Ac3H11_1387 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY low > 79
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_11085 algH YqgE/AlgH family protein 0.68 OKGIIK_02835 cheY chemotaxis response regulator CheY low > 52
Rhizobium sp. OAE497 0.39 ABIE40_RS04185 YqgE/AlgH family protein 0.35 ABIE40_RS02870 chemotaxis response regulator CheY1 — —
Erwinia tracheiphila SCR3 0.39 LU632_RS05475 YqgE/AlgH family protein 0.66 LU632_RS13520 cheY chemotaxis response regulator CheY low > 74
Shewanella amazonensis SB2B 0.39 Sama_2472 putative transcriptional regulator (RefSeq) 0.82 Sama_2279 response regulator receiver protein (RefSeq) low > 62
Escherichia coli ECRC101 0.39 OKFHMN_19270 yqgE YqgE/AlgH family protein 0.65 OKFHMN_26155 cheY chemotaxis regulatory protein CheY — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_00770 hypothetical protein 0.65 OHPLBJKB_01846 Chemotaxis protein CheY low > 73
Escherichia coli Nissle 1917 0.39 ECOLIN_RS16400 YqgE/AlgH family protein 0.65 ECOLIN_RS10750 chemotaxis response regulator CheY — —
Escherichia coli ECRC102 0.39 NIAGMN_17035 yqgE YqgE/AlgH family protein 0.65 NIAGMN_01905 cheY chemotaxis regulatory protein CheY — —
Escherichia fergusonii Becca 0.39 EFB2_00954 hypothetical protein 0.65 EFB2_02061 Chemotaxis protein CheY low > 86
Escherichia coli BW25113 0.39 b2948 yqgE orf, hypothetical protein (VIMSS) 0.65 b1882 cheY chemotaxis regulator transmitting signal to flagellar motor component (NCBI) low > 76
Rhodospirillum rubrum S1H 0.39 Rru_A3059 Protein of unknown function DUF179 (NCBI) 0.54 Rru_A2837 Response regulator receiver domain protein (CheY) (NCBI) low > 58
Escherichia coli BL21 0.39 ECD_02778 uncharacterized protein 0.65 ECD_01853 chemotaxis regulator transmitting signal to flagellar motor component — —
Escherichia coli ECRC62 0.39 BNILDI_09720 yqgE YqgE/AlgH family protein 0.65 BNILDI_15385 cheY chemotaxis regulatory protein CheY — —
Escherichia coli ECOR27 0.39 NOLOHH_11140 yqgE YqgE/AlgH family protein 0.65 NOLOHH_16595 cheY chemotaxis regulatory protein CheY — —
Escherichia coli ECOR38 0.39 HEPCGN_18575 yqgE YqgE/AlgH family protein 0.65 HEPCGN_04575 cheY chemotaxis regulatory protein CheY low > 85
Escherichia coli ECRC98 0.39 JDDGAC_22900 yqgE YqgE/AlgH family protein 0.65 JDDGAC_00730 cheY chemotaxis regulatory protein CheY — —
Escherichia coli ECRC99 0.39 KEDOAH_08870 algH YqgE/AlgH family protein 0.65 KEDOAH_01950 cheY chemotaxis regulatory protein CheY — —
Escherichia coli ECRC101 0.39 MCAODC_09790 yqgE YqgE/AlgH family protein 0.65 MCAODC_19250 cheY chemotaxis regulatory protein CheY — —
Pantoea sp. MT58 0.39 IAI47_03610 YqgE/AlgH family protein 0.66 IAI47_08335 chemotaxis response regulator CheY 0.33 55
Bosea sp. OAE506 0.39 ABIE41_RS23005 YqgE/AlgH family protein 0.49 ABIE41_RS23275 response regulator low > 77
Shewanella oneidensis MR-1 0.38 SO3346 conserved hypothetical protein (NCBI ptt file) 0.81 SO3209 cheY-3 chemotaxis protein CheY (NCBI ptt file) low > 76
Sinorhizobium meliloti 1021 0.38 SMc00019 hypothetical protein 0.33 SMc03006 chemotaxis regulator protein low > 103
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF3050 UPF0301 protein YqgE 0.66 GFF1663 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY low > 78
Enterobacter asburiae PDN3 0.37 EX28DRAFT_2986 Putative transcriptional regulator 0.64 EX28DRAFT_0674 Response regulator receiver domain low > 76
Shewanella loihica PV-4 0.37 Shew_1144 hypothetical protein (RefSeq) 0.81 Shew_1384 response regulator receiver protein (RefSeq) low > 60
Enterobacter sp. TBS_079 0.37 MPMX20_03806 hypothetical protein 0.65 MPMX20_02786 Chemotaxis protein CheY low > 85
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF648 UPF0301 protein YqgE 0.58 GFF1435 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY — —
Phaeobacter inhibens DSM 17395 0.36 PGA1_c03130 Putative transcriptional regulator 0.29 PGA1_262p02090 response regulator receiver domain-containing protein low > 62
Rahnella sp. WP5 0.35 EX31_RS02670 YqgE/AlgH family protein 0.66 EX31_RS11355 chemotaxis protein CheY low > 89
Caulobacter crescentus NA1000 0.33 CCNA_03506 putative transcriptional regulator 0.52 CCNA_00628 chemotaxis protein cheY low > 66
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_03506 putative transcriptional regulator 0.52 CCNA_00628 chemotaxis protein cheY 0.48 58
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_4015 Putative transcriptional regulator 0.38 Ga0059261_1116 Response regulator receiver domain low > 68
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS00260 YqgE/AlgH family protein 0.36 A4249_RS15585 response regulator low > 48

Not shown: 9 genomes with orthologs for PS417_26685 only; 2 genomes with orthologs for PS417_19690 only